SoyBase SoyBase transitions to NEW site on 10/1/2024
Integrating Genetics and Genomics to Advance Soybean Research

Report for Sequence Feature Glyma.03g198400

Feature Type:gene_model
Chromosome:Gm03
Start:41937542
stop:41941183
Source:JGI
Version:Wm82.a4.v1
High confidence:yes



Annotations for Glyma.03g198400
Database IDAnnotation TypeAnnotation DescriptionAnnotation SourceMatch ScoreEvidence Code
AT1G08370.1AT ATDCP1,DCP1 JGI N/AIEA
K12611KEGG Messenger RNA biogenesis JGI N/AIEA
PTHR16290PantherFam TRANSCRIPTION FACTOR SMIF DECAPPING ENZYME DCP1 JGI N/AIEA
PF06058Pfam Dcp1-like decapping family JGI N/AIEA

Gene model name correspondences to Glyma.03g198400 Gene Call Version Wm82.a4.v1
Corresponding NameAnnotation VersionEvidenceComments
Glyma03g35640 Wm82.a1.v1.1IGC As supplied by JGI


Coding sequences of Glyma.03g198400
>Glyma.03g198400.1 sequence-type=CDS polypeptide=Glyma.03g198400.1.p locus=Glyma.03g198400 id=Glyma.03g198400.1.Wm82.a4.v1 annot-version=Wm82.a4.v1
ATGTCTCAGACCAAGAAATTGACGCCGAATCTGGATCAGCAGAGCACGAAGGTGCTGAATCTCACCGTGCTCCAGCGAATCGATCCGTACATCGACGAGATTCTCTTCACTGCCGCGCATGTCTCCTTCTACGACTTCAACATCGAAAGCAACCAGTGGAGTCGCAAGGATGTTGAAGGATCTCTCTTCGTTGTCAAGAGGAATTCACAACCACGGTTTCAGTTTATCGTAATGAATCGCCGGAATACAGATAATCTAGTTGAGAATCTATTGGATTTTGAGTATGAACTTAAAAAGCCGTACCTGTTATATCGAAATGCAGCTCAAGAAGTTAACGGTATATGGTTTTACAATCCAGATGAATGTGAAGAAGTTGCAAATCTCTTTAACAGGATACTTAATGCGTACCCAAAGACACCTCCAACTACAATACCGCCTGTTAACATAAGTGAGTCTGAGGAACTTCAGCCAGTGTCAATTATACCGGAAAGCCCTCTAGAGTCATCTTCAGTTGCTGCTTCTGCAATTGATGCTGTTGAAGATCCTGCATTTACAAACTTCTTCAGTACATTGAAGGTTACTGGAAATTATGCTTCCAATATGGAAAATTTTAGACAGCATTCTGCAACTGTCACTTCTGCTCCTGGTGGTTTGTTATCTACTGCACCTACTGTGCAAATACCATCTGCCTCTCATTCAACTTCATCGATATCAGGCTTCCCCCTTGACTCTCTTGAAACAGCCAAGAGTGGCAATCAAGTCATTAATCTTGTTAAGCCTTCTACTTTTTTTGCATCAACGTCTTCATCTTCACTGTTAGTTCCACCTATTTATTCATCTGTGCCGCCTAGTGCAGTTGTTCATCATTCCCTGAATGTGCCACGCCAATACGGCACTCCAGTACTTCAACCCTTCCCTCCCCCTAATCCTCCTCTTTCTCTTACCCCTATTTCAAGCTCCACTCCAAATAGACCTGTAATCAGCAGGGATAATGTCCGTGATGCACTTTTATCATTGGTTCAGGAGGATCATTTCATTGACATGATGTTCCAGGCATTACTGAAGGTGAGTCATTCATGA

>Glyma.03g198400.2 sequence-type=CDS polypeptide=Glyma.03g198400.2.p locus=Glyma.03g198400 id=Glyma.03g198400.2.Wm82.a4.v1 annot-version=Wm82.a4.v1
ATGAATCGCCGGAATACAGATAATCTAGTTGAGAATCTATTGGATTTTGAGTATGAACTTAAAAAGCCGTACCTGTTATATCGAAATGCAGCTCAAGAAGTTAACGGTATATGGTTTTACAATCCAGATGAATGTGAAGAAGTTGCAAATCTCTTTAACAGGATACTTAATGCGTACCCAAAGACACCTCCAACTACAATACCGCCTGTTAACATAAGTGAGTCTGAGGAACTTCAGCCAGTGTCAATTATACCGGAAAGCCCTCTAGAGTCATCTTCAGTTGCTGCTTCTGCAATTGATGCTGTTGAAGATCCTGCATTTACAAACTTCTTCAGTACATTGAAGGTTACTGGAAATTATGCTTCCAATATGGAAAATTTTAGACAGCATTCTGCAACTGTCACTTCTGCTCCTGGTGGTTTGTTATCTACTGCACCTACTGTGCAAATACCATCTGCCTCTCATTCAACTTCATCGATATCAGGCTTCCCCCTTGACTCTCTTGAAACAGCCAAGAGTGGCAATCAAGTCATTAATCTTGTTAAGCCTTCTACTTTTTTTGCATCAACGTCTTCATCTTCACTGTTAGTTCCACCTATTTATTCATCTGTGCCGCCTAGTGCAGTTGTTCATCATTCCCTGAATGTGCCACGCCAATACGGCACTCCAGTACTTCAACCCTTCCCTCCCCCTAATCCTCCTCTTTCTCTTACCCCTATTTCAAGCTCCACTCCAAATAGACCTGTAATCAGCAGGGATAATGTCCGTGATGCACTTTTATCATTGGTTCAGGAGGATCATTTCATTGACATGATGTTCCAGGCATTACTGAAGGTGAGTCATTCATGA
Predicted protein sequences of Glyma.03g198400
>Glyma.03g198400.1.p sequence-type=predicted peptide transcript=Glyma.03g198400.1 locus=Glyma.03g198400 id=Glyma.03g198400.1.p.Wm82.a4.v1 annot-version=Wm82.a4.v1
MSQTKKLTPNLDQQSTKVLNLTVLQRIDPYIDEILFTAAHVSFYDFNIESNQWSRKDVEGSLFVVKRNSQPRFQFIVMNRRNTDNLVENLLDFEYELKKPYLLYRNAAQEVNGIWFYNPDECEEVANLFNRILNAYPKTPPTTIPPVNISESEELQPVSIIPESPLESSSVAASAIDAVEDPAFTNFFSTLKVTGNYASNMENFRQHSATVTSAPGGLLSTAPTVQIPSASHSTSSISGFPLDSLETAKSGNQVINLVKPSTFFASTSSSSLLVPPIYSSVPPSAVVHHSLNVPRQYGTPVLQPFPPPNPPLSLTPISSSTPNRPVISRDNVRDALLSLVQEDHFIDMMFQALLKVSHS*

>Glyma.03g198400.2.p sequence-type=predicted peptide transcript=Glyma.03g198400.2 locus=Glyma.03g198400 id=Glyma.03g198400.2.p.Wm82.a4.v1 annot-version=Wm82.a4.v1
MNRRNTDNLVENLLDFEYELKKPYLLYRNAAQEVNGIWFYNPDECEEVANLFNRILNAYPKTPPTTIPPVNISESEELQPVSIIPESPLESSSVAASAIDAVEDPAFTNFFSTLKVTGNYASNMENFRQHSATVTSAPGGLLSTAPTVQIPSASHSTSSISGFPLDSLETAKSGNQVINLVKPSTFFASTSSSSLLVPPIYSSVPPSAVVHHSLNVPRQYGTPVLQPFPPPNPPLSLTPISSSTPNRPVISRDNVRDALLSLVQEDHFIDMMFQALLKVSHS*






Funded by the USDA-ARS. Developed by the USDA-ARS SoyBase and Legume Clade Database group at the Iowa State University, Ames, IA
 
USDA Logo
Iowa State University Logo