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Report for Sequence Feature Glyma.03g188500

Feature Type:gene_model
Chromosome:Gm03
Start:41125095
stop:41129586
Source:JGI
Version:Wm82.a4.v1
High confidence:yes



Annotations for Glyma.03g188500
Database IDAnnotation TypeAnnotation DescriptionAnnotation SourceMatch ScoreEvidence Code
AT2G36660.1AT PAB7 JGI N/AIEA
GO:0003676GO-mf nucleic acid binding JGI N/AIEA
GO:0003723GO-mf RNA binding JGI N/AIEA
K13126KEGG Spliceosome JGI N/AIEA
KOG0123 KOG Polyadenylate-binding protein (RRM superfamily) JGI N/AIEA
PTHR24012PantherFam RNA BINDING PROTEIN JGI N/AIEA
PTHR24012:SF455PantherFam POLYADENYLATE-BINDING PROTEIN 7 JGI N/AIEA
PF00076Pfam RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain) JGI N/AIEA
PF00658Pfam Poly-adenylate binding protein, unique domain JGI N/AIEA

Gene model name correspondences to Glyma.03g188500 Gene Call Version Wm82.a4.v1
Corresponding NameAnnotation VersionEvidenceComments
Glyma03g34580 Wm82.a1.v1.1IGC As supplied by JGI


Coding sequences of Glyma.03g188500
>Glyma.03g188500.1 sequence-type=CDS polypeptide=Glyma.03g188500.1.p locus=Glyma.03g188500 id=Glyma.03g188500.1.Wm82.a4.v1 annot-version=Wm82.a4.v1
ATGGCGGTTCCTCCGTCGGTCGCCGCCGCTCCGGCGTCGCTCTACGTCGGCGACCTCCACCCCAACGTCTCCGACAACCACCTCGTCGACGCATTCTCCGACTTCGAGAGCCTCGCGTCTGTTCGCGTCTGCAAAGACTCCTCCACCGGCAAATCCCTCTGTTACGGTTACGTCAACTTCGTTTCTCCTCAAGACGCAATTCGTGCAATCGAGCTGAAAAATAACTCCACGCTGAATGGGAAAGCGATGAGGGTGATGTGGTCGCGTCGCGATCCTGATGCGAGGAAAAATGCTATAGGGAACTTGTTTGTTAAGAACTTACCTGAATCGATAGATAATGCTGGACTACAAGATATGTTCAAAAAATATGGCAATATTCTGTCCAGCAAAGTCGTCATGTCTGAGGATGGGAAGAGCAAAGGATACGGCTTTGTTCAATTTGAATCAGAAGAATCTTCAAATGTTGCCATCGAGAAGCTGAACGGCTCTACTGTTGGTGATAAGCAGTTATATGTTGGGAAGTTTGTCAAAAAAAGTGATCGCATTTTGCCTGGCCCTGATGCTAGATATACAAATTTGTACATGAAGAATTTGGACCTGGATGTTTCAGAAGCAACACTGCAGGAGAAATTTTCCTCTTTTGGGAAAATTGTTAGCTTGGTTATTGCAAAGGACAACATTGGAATGTCCAAGGGTTTTGGCTTTGTGAACTATGATAACCCAGATGATGCTAAAAGGGCAATGGAAGCAATGAATGGATCAAAATTAGGTTCTAAGATTCTGTATGTAGCCAGAGCACAAAAGAAGGCTGAGCGTGAGCAGATCTTGCACCACCAATTTGAGGAGAAGCGGAAGGAACAAATCTTGAAATACAAGGGATCGAACATTTATGTGAAGAACATTGATGACCATGTAAGTGATGAAGAACTGAGGGATCATTTTAGTGCATGTGGCATTATAACTTCTGCAAAAATTATGCGAGACGACAAAGGGATAAGTAAAGGGTTCGGCTTTGTCTGCTTCTCCACTCCTGAGGAGGCCAATAAAGCTGTGAACACATTTCATGGATTCATGTTTCATGGTAAACCACTATATGTTGCTCTTGCTCAGAGGAAAGAGGATAGGAAAGCACAATTGCAGCTCCAGTATGCACAGCAAGTGGCAGGACTATCTGGACCATCAACTGCCATTATCCCTGGTGGATATCCTCCTTACTACTATGCAGCTACTGGTGTTATTTCACATGTGCCTCCTCGAGCTGGGCTGATGTATCAACATCTGCCAATGAGGCCAGGATGGGGGGCTAATGGCTTTGCACTCCCTGCTAGATCATTCCAACAATCACCAGTTCCTGCAGTTTCTAACAATACCAGGCAGCATAGGCAAAACAGGGGAAGGTTGAATGGGAATCCAATAGCACAGGGAAATACTCACTCTGTTACTTATTTACCACAAGCCCAGCAGATTTCTCAGCCAGTGATCTCTTCAAGTACTCAGCAGAGAACCGGACAGGCTAAGTACTTACCTAGTGGACGCCAGCGTGACATGGAAAAAGGATCTGGATCCTCATCTAGTGGTTCAAACTCTGGCAGAGGGTCCCAGGGGTCAGAAATGCTGCATAGCATGCTTGCTGGTGCTGCTCCTGAGCAGCAGAAAGAGATTCTCGGGGAGCATCTTTACATGCTTGTTCATAAACTAAAGCCTACCCTAGCAGCCAAAATAACAGGGATGCTTTTGGAGATGGACAATGGAGAATTGCTGCTTCTCCTGGAATCGCCAGAGTCTCTTTCTGCCAAGGTGGAAGAAGCTGTCCAAGTGCTTAAGAACTCTAAGACCAAAGTTTCTGGCCAGGACGTACTTCATTCAAATTTCCTTTCAGCTGAGGTTGCAGTTAACTGA
Predicted protein sequences of Glyma.03g188500
>Glyma.03g188500.1.p sequence-type=predicted peptide transcript=Glyma.03g188500.1 locus=Glyma.03g188500 id=Glyma.03g188500.1.p.Wm82.a4.v1 annot-version=Wm82.a4.v1
MAVPPSVAAAPASLYVGDLHPNVSDNHLVDAFSDFESLASVRVCKDSSTGKSLCYGYVNFVSPQDAIRAIELKNNSTLNGKAMRVMWSRRDPDARKNAIGNLFVKNLPESIDNAGLQDMFKKYGNILSSKVVMSEDGKSKGYGFVQFESEESSNVAIEKLNGSTVGDKQLYVGKFVKKSDRILPGPDARYTNLYMKNLDLDVSEATLQEKFSSFGKIVSLVIAKDNIGMSKGFGFVNYDNPDDAKRAMEAMNGSKLGSKILYVARAQKKAEREQILHHQFEEKRKEQILKYKGSNIYVKNIDDHVSDEELRDHFSACGIITSAKIMRDDKGISKGFGFVCFSTPEEANKAVNTFHGFMFHGKPLYVALAQRKEDRKAQLQLQYAQQVAGLSGPSTAIIPGGYPPYYYAATGVISHVPPRAGLMYQHLPMRPGWGANGFALPARSFQQSPVPAVSNNTRQHRQNRGRLNGNPIAQGNTHSVTYLPQAQQISQPVISSSTQQRTGQAKYLPSGRQRDMEKGSGSSSSGSNSGRGSQGSEMLHSMLAGAAPEQQKEILGEHLYMLVHKLKPTLAAKITGMLLEMDNGELLLLLESPESLSAKVEEAVQVLKNSKTKVSGQDVLHSNFLSAEVAVN*






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