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Report for Sequence Feature Glyma.03g178900

Feature Type:gene_model
Chromosome:Gm03
Start:40302424
stop:40304302
Source:JGI
Version:Wm82.a4.v1
High confidence:yes



Annotations for Glyma.03g178900
Database IDAnnotation TypeAnnotation DescriptionAnnotation SourceMatch ScoreEvidence Code
AT3G25940.1AT JGI N/AIEA
2.7.7.6EC DNA-directed RNA polymerase JGI N/AIEA
GO:0006351GO-bp transcription, DNA-templated JGI N/AIEA
GO:0003676GO-mf nucleic acid binding JGI N/AIEA
GO:0008270GO-mf zinc ion binding JGI N/AIEA
K03000KEGG Transcription machinery JGI N/AIEA
KOG2907 KOG RNA polymerase I transcription factor TFIIS, subunit A12.2/RPA12 JGI N/AIEA
PTHR11239PantherFam DNA-DIRECTED RNA POLYMERASE JGI N/AIEA
PTHR11239:SF14PantherFam DNA-DIRECTED RNA POLYMERASE I SUBUNIT RPA12 JGI N/AIEA
PF01096Pfam Transcription factor S-II (TFIIS) JGI N/AIEA

Gene model name correspondences to Glyma.03g178900 Gene Call Version Wm82.a4.v1
Corresponding NameAnnotation VersionEvidenceComments
Glyma03g33630 Wm82.a1.v1.1IGC As supplied by JGI


Coding sequences of Glyma.03g178900
>Glyma.03g178900.1 sequence-type=CDS polypeptide=Glyma.03g178900.1.p locus=Glyma.03g178900 id=Glyma.03g178900.1.Wm82.a4.v1 annot-version=Wm82.a4.v1
ATGGCTTCTTCTCGGCTCGATTTCTTGTTCTGTAATTTGTGTGGGACAATGCTCACTGTCCCTTCCACTGAGTACGCACAATGCCCACTGTGCAAAACTCGCCGAGACATACAAGATATTTGTGATAAGGAAATAAGTTTCACAATTTCTGATGAGGATATCAGAAGAGAGCTTGGAATGGAAATAATTGAGGAACATGCGGTGATGGAATATTCTAAGGTCAGCAAGAAATGTGAAAAATGTGGCCATGGTGAAGCTACCTATTATACTAGACAGATGAGATCAGCAGATGAAGGGCAAACTACTTTCTACACATGTACCGGCTGTGGTCATCAATCTCAGGAGAATTAG
Predicted protein sequences of Glyma.03g178900
>Glyma.03g178900.1.p sequence-type=predicted peptide transcript=Glyma.03g178900.1 locus=Glyma.03g178900 id=Glyma.03g178900.1.p.Wm82.a4.v1 annot-version=Wm82.a4.v1
MASSRLDFLFCNLCGTMLTVPSTEYAQCPLCKTRRDIQDICDKEISFTISDEDIRRELGMEIIEEHAVMEYSKVSKKCEKCGHGEATYYTRQMRSADEGQTTFYTCTGCGHQSQEN*






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