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Report for Sequence Feature Glyma.03g175400

Feature Type:gene_model
Chromosome:Gm03
Start:40059735
stop:40062542
Source:JGI
Version:Wm82.a4.v1
High confidence:yes



Annotations for Glyma.03g175400
Database IDAnnotation TypeAnnotation DescriptionAnnotation SourceMatch ScoreEvidence Code
AT3G53500.2AT RSZ32 JGI N/AIEA
GO:0003676GO-mf nucleic acid binding JGI N/AIEA
GO:0008270GO-mf zinc ion binding JGI N/AIEA
K12896KEGG Spliceosome JGI N/AIEA
KOG0107 KOG Alternative splicing factor SRp20/9G8 (RRM superfamily) JGI N/AIEA
PTHR23147PantherFam SERINE/ARGININE RICH SPLICING FACTOR JGI N/AIEA
PF00076Pfam RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain) JGI N/AIEA
PF00098Pfam Zinc knuckle JGI N/AIEA

Gene model name correspondences to Glyma.03g175400 Gene Call Version Wm82.a4.v1
Corresponding NameAnnotation VersionEvidenceComments
Glyma03g33260 Wm82.a1.v1.1IGC As supplied by JGI


Coding sequences of Glyma.03g175400
>Glyma.03g175400.1 sequence-type=CDS polypeptide=Glyma.03g175400.1.p locus=Glyma.03g175400 id=Glyma.03g175400.1.Wm82.a4.v1 annot-version=Wm82.a4.v1
ATGCCTCGCTATGATGATAAATACGGCAATACCCGCCTCTATGTGGGGCACTTATCTTCGAGGACTCGTTCCCGGGATCTGGAGCGTGCCTTCAGCAGATATGGAAGAGTTCGGGGTGTGGATATGAAGAATGATTTCGCCTTTGTTGATTTTAGTGATCCTCGAGATGCTGATGATGCAAGATATAACTTGGATGGTCGGGATGTTGATGGAAGTCGTATTATTGTGGAATTTGCAAAAGGGGCTCCTCGTGGGTCCCGGGAATATTTGGGGCGAGGTCCTCCTCCTGGCTCTGGACGCTGCTTTAATTGTGGCCTTGATGGTCATTGGGCACGGGATTGCAAAGCTGGGGATTGGAAGAATAAGTGTTACCGCTGTGGGGAGAGAGGACATATAGAAAGGAACTGCAAGAACAGCCCCAAAAAATTGAGCACAAGGCGAGGACGGAGTTATTCACGGTCACCAGTCAGGTCACATTCACCTCGTCGTGGCAGAAGCCGTGATCGCAGTTACAGCCGAGATCGCAGCTACAGTCGATCACGATCCCCTGTCAGAAGAGAAGAAAGCCCCGTTCGTGAAGATAGGTCACAAAGCCCTCAACACAAAAATAGTCCTCAGCCCTCCAAGACAAGGAAGCATAGTCCATCACCTGACCGTAGCCCACAGAGAAGAGGTGACACATCTCCTGACAATGATAGGTTGAGCAGAAGCCCTGCAAGGGACCGCGAAGATAGGGGCTATGACAGCCCTAAAGTTAATGGTCGTAGTGGCAGCCCTAGCCGTAGCCCCAGGGATGATGACAGGAGCCCCATTGATGATGAAGACAACCACCGCCACTCACCAAGAGGCAGCGAGTCACCTTAA

>Glyma.03g175400.2 sequence-type=CDS polypeptide=Glyma.03g175400.2.p locus=Glyma.03g175400 id=Glyma.03g175400.2.Wm82.a4.v1 annot-version=Wm82.a4.v1
ATGAAGAATGATTTCGCCTTTGTTGATTTTAGTGATCCTCGAGATGCTGATGATGCAAGATATAACTTGGATGGTCGGGATGTTGATGGAAGTCGTATTATTGTGGAATTTGCAAAAGGGGCTCCTCGTGGGTCCCGGGAATATTTGGGGCGAGGTCCTCCTCCTGGCTCTGGACGCTGCTTTAATTGTGGCCTTGATGGTCATTGGGCACGGGATTGCAAAGCTGGGGATTGGAAGAATAAGTGTTACCGCTGTGGGGAGAGAGGACATATAGAAAGGAACTGCAAGAACAGCCCCAAAAAATTGAGCACAAGGCGAGGACGGAGTTATTCACGGTCACCAGTCAGGTCACATTCACCTCGTCGTGGCAGAAGCCGTGATCGCAGTTACAGCCGAGATCGCAGCTACAGTCGATCACGATCCCCTGTCAGAAGAGAAGAAAGCCCCGTTCGTGAAGATAGGTCACAAAGCCCTCAACACAAAAATAGTCCTCAGCCCTCCAAGACAAGGAAGCATAGTCCATCACCTGACCGTAGCCCACAGAGAAGAGGTGACACATCTCCTGACAATGATAGGTTGAGCAGAAGCCCTGCAAGGGACCGCGAAGATAGGGGCTATGACAGCCCTAAAGTTAATGGTCGTAGTGGCAGCCCTAGCCGTAGCCCCAGGGATGATGACAGGAGCCCCATTGATGATGAAGACAACCACCGCCACTCACCAAGAGGCAGCGAGTCACCTTAA
Predicted protein sequences of Glyma.03g175400
>Glyma.03g175400.1.p sequence-type=predicted peptide transcript=Glyma.03g175400.1 locus=Glyma.03g175400 id=Glyma.03g175400.1.p.Wm82.a4.v1 annot-version=Wm82.a4.v1
MPRYDDKYGNTRLYVGHLSSRTRSRDLERAFSRYGRVRGVDMKNDFAFVDFSDPRDADDARYNLDGRDVDGSRIIVEFAKGAPRGSREYLGRGPPPGSGRCFNCGLDGHWARDCKAGDWKNKCYRCGERGHIERNCKNSPKKLSTRRGRSYSRSPVRSHSPRRGRSRDRSYSRDRSYSRSRSPVRREESPVREDRSQSPQHKNSPQPSKTRKHSPSPDRSPQRRGDTSPDNDRLSRSPARDREDRGYDSPKVNGRSGSPSRSPRDDDRSPIDDEDNHRHSPRGSESP*

>Glyma.03g175400.2.p sequence-type=predicted peptide transcript=Glyma.03g175400.2 locus=Glyma.03g175400 id=Glyma.03g175400.2.p.Wm82.a4.v1 annot-version=Wm82.a4.v1
MKNDFAFVDFSDPRDADDARYNLDGRDVDGSRIIVEFAKGAPRGSREYLGRGPPPGSGRCFNCGLDGHWARDCKAGDWKNKCYRCGERGHIERNCKNSPKKLSTRRGRSYSRSPVRSHSPRRGRSRDRSYSRDRSYSRSRSPVRREESPVREDRSQSPQHKNSPQPSKTRKHSPSPDRSPQRRGDTSPDNDRLSRSPARDREDRGYDSPKVNGRSGSPSRSPRDDDRSPIDDEDNHRHSPRGSESP*






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