SoyBase SoyBase transitions to NEW site on 10/1/2024
Integrating Genetics and Genomics to Advance Soybean Research

Report for Sequence Feature Glyma.03g170300

Feature Type:gene_model
Chromosome:Gm03
Start:39695019
stop:39701882
Source:JGI
Version:Wm82.a4.v1
High confidence:yes



Annotations for Glyma.03g170300
Database IDAnnotation TypeAnnotation DescriptionAnnotation SourceMatch ScoreEvidence Code
AT2G20180.3AT PIF1,PIL5 JGI N/AIEA
GO:0046983GO-mf protein dimerization activity JGI N/AIEA
PTHR12565PantherFam STEROL REGULATORY ELEMENT-BINDING PROTEIN JGI N/AIEA
PF00010Pfam Helix-loop-helix DNA-binding domain JGI N/AIEA

Gene model name correspondences to Glyma.03g170300 Gene Call Version Wm82.a4.v1
Corresponding NameAnnotation VersionEvidenceComments
Glyma03g32747 Wm82.a1.v1.1IGC As supplied by JGI


Coding sequences of Glyma.03g170300
>Glyma.03g170300.2 sequence-type=CDS polypeptide=Glyma.03g170300.2.p locus=Glyma.03g170300 id=Glyma.03g170300.2.Wm82.a4.v1 annot-version=Wm82.a4.v1
ATGGACCACGACCACGAATACCCTATTCTCACGCCTTCAGCCTTACCTCGCCAAAAGAAACCCTCCATTGCAGACGACGATATCATGGAGCTGCTATGGCACAACGGCCAGGTCGTGGTGCAGAGTCAGAACCAACGTTCTCTGAGAAAACTTCCGCCGGTGACCAACTCCCACGACGCCTCTCCCGCCGGTCCTTCAATGACGAGAGAGATTCGACCGCTGGTGGAGAATTTCAATCAGCATCTCTTCATGCACGAAGGCGAAATGGCTTCGTGGCTTCACTATCCTATCGACGACGACGAGCCTGCGTTGGATCAAAGCTTCGGCGCCGATTTTCTCTATTCTCCGCCGACGACGGCTAACAACAGCAGCTTCATGCAAACCCTCGGCCACACGTCTCAGCTCACGGAGCTCCGGCCGATGTCGGCGAATCCACGGCCTCCGATTCCGCCCCCGAGAAGGCCGGAACAGAGGACGCCGAACTTCGCGTACTTCTCGAGGCACAACACGAGAGCCGCGGAGCCGAGCGTGAAGGCCGCCGCGAGGGAATCCACGGTGGTGGATTCGTGCGATACGGAGGCGGCGGCTTCGAGAGTTTCGGAGACAGTAAGGAGCGCGGCGGAAGGAGGTGCCGGCGTTGCGGCGCCTTCGACGAGTGCCGGCGGTGGAAGGAGCACGATGATGTACGATTTGACGATGACGTCATCGCCTGGCGGTTCGAGTAGCTGCGACGAGCCGGTTCAGGTAGCGGCGGCGGAGGAGGATCGGAAGCGGAAGGGACGGGAGGCGGAGGAATGGGAGTGTCAGAGCGAGGATGTTGATTTTGAATCAGAAGCAAAGAAGCAAGTTTGTGGATCAACATCTACAAAGAGATCCCGTGCTGCCGAGGTCCATAATCTCTCTGAGAGGAGGCGTCGCGATCGGATTAATGAAAAGATGAAAGCTCTGCAAGAACTTATACCTCGTTGCAATAAGTCGGACAAAGCTTCAATGCTGGATGAAGCAATTTCGTACTTGAAGTCATTGCAGTTACAAGTGCAGATGATGTCCATGGGATGTGGAATGGTACCTGTGATGTTTCCTGGAATCCAGCAGTACATGCCAGCAATGGGAATGGGGGTTGGAATGGGTATGGGTATGGAAATGGGAATGAACAGACCTGTAATGCCGTTTCCCAATATGTTACCTGGTTCGGCTTTGCCAGCGGCAACTGCAGCTGCTGCTCATTTGGGACCAAGGTTTTCCATGCCTCCTTTCCACATGCCCCATGTTCCTGCTCCTGATTCATCTAGAATGCAAGCAGCAAATCAGTCAGATAATAATATGGTCACGTCAGCTGGTCCACCTGATCCAAATCAGTCACGTATCCCAAACTTCACTGATCCTTATCAACAATATCTTGGTCCCCACCAGATGCAGTTCCAATTAATTCAGGAGAATAAATGA

>Glyma.03g170300.21 sequence-type=CDS polypeptide=Glyma.03g170300.21.p locus=Glyma.03g170300 id=Glyma.03g170300.21.Wm82.a4.v1 annot-version=Wm82.a4.v1
ATGACCAATAATCACAATCACTGTGTTCCAGATTTCGATATTCAAATGGACCACGACCACGAATACCCTATTCTCACGCCTTCAGCCTTACCTCGCCAAAAGAAACCCTCCATTGCAGACGACGATATCATGGAGCTGCTATGGCACAACGGCCAGGTCGTGGTGCAGAGTCAGAACCAACGTTCTCTGAGAAAACTTCCGCCGGTGACCAACTCCCACGACGCCTCTCCCGCCGGTCCTTCAATGACGAGAGAGATTCGACCGCTGGTGGAGAATTTCAATCAGCATCTCTTCATGCACGAAGGCGAAATGGCTTCGTGGCTTCACTATCCTATCGACGACGACGAGCCTGCGTTGGATCAAAGCTTCGGCGCCGATTTTCTCTATTCTCCGCCGACGACGGCTAACAACAGCAGCTTCATGCAAACCCTCGGCCACACGTCTCAGCTCACGGAGCTCCGGCCGATGTCGGCGAATCCACGGCCTCCGATTCCGCCCCCGAGAAGGCCGGAACAGAGGACGCCGAACTTCGCGTACTTCTCGAGGCACAACACGAGAGCCGCGGAGCCGAGCGTGAAGGCCGCCGCGAGGGAATCCACGGTGGTGGATTCGTGCGATACGGAGGCGGCGGCTTCGAGAGTTTCGGAGACAGTAAGGAGCGCGGCGGAAGGAGGTGCCGGCGTTGCGGCGCCTTCGACGAGTGCCGGCGGTGGAAGGAGCACGATGATGTACGATTTGACGATGACGTCATCGCCTGGCGGTTCGAGTAGCTGCGACGAGCCGGTTCAGGTAGCGGCGGCGGAGGAGGATCGGAAGCGGAAGGGACGGGAGGCGGAGGAATGGGAGTGTCAGAGCGAGGATGTTGATTTTGAATCAGAAGCAAAGAAGCAAGTTTGTGGATCAACATCTACAAAGAGATCCCGTGCTGCCGAGGTCCATAATCTCTCTGAGAGGAGGCGTCGCGATCGGATTAATGAAAAGATGAAAGCTCTGCAAGAACTTATACCTCGTTGCAATAAGTCGGACAAAGCTTCAATGCTGGATGAAGCAATTTCGTACTTGAAGTCATTGCAGTTACAAGTGCAGATGATGTCCATGGGATGTGGAATGGTACCTGTGATGTTTCCTGGAATCCAGCAGTACATGCCAGCAATGGGAATGGGGGTTGGAATGGGTATGGGTATGGAAATGGGAATGAACAGACCTGTAATGCCGTTTCCCAATATGTTACCTGGTTCGGCTTTGCCAGCGGCAACTGCAGCTGCTGCTCATTTGGGACCAAGGTTTTCCATGCCTCCTTTCCACATGCCCCATGTTCCTGCTCCTGATTCATCTAGAATGCAAGCAGCAAATCAGTCAGATAATAATATGGTCACGTCAGCTGGTCCACCTGATCCAAATCAGTCACGTATCCCAAACTTCACTGATCCTTATCAACAATATCTTGGTCCCCACCAGATGCAGTTCCAATTAATTCAGAATCAGGCAATGAACCAACCAAATGTTAGCAAGCCAAGTAACAATGGGGGCCCTGCGAATCCAGAAAACCATTAG
Predicted protein sequences of Glyma.03g170300
>Glyma.03g170300.2.p sequence-type=predicted peptide transcript=Glyma.03g170300.2 locus=Glyma.03g170300 id=Glyma.03g170300.2.p.Wm82.a4.v1 annot-version=Wm82.a4.v1
MDHDHEYPILTPSALPRQKKPSIADDDIMELLWHNGQVVVQSQNQRSLRKLPPVTNSHDASPAGPSMTREIRPLVENFNQHLFMHEGEMASWLHYPIDDDEPALDQSFGADFLYSPPTTANNSSFMQTLGHTSQLTELRPMSANPRPPIPPPRRPEQRTPNFAYFSRHNTRAAEPSVKAAARESTVVDSCDTEAAASRVSETVRSAAEGGAGVAAPSTSAGGGRSTMMYDLTMTSSPGGSSSCDEPVQVAAAEEDRKRKGREAEEWECQSEDVDFESEAKKQVCGSTSTKRSRAAEVHNLSERRRRDRINEKMKALQELIPRCNKSDKASMLDEAISYLKSLQLQVQMMSMGCGMVPVMFPGIQQYMPAMGMGVGMGMGMEMGMNRPVMPFPNMLPGSALPAATAAAAHLGPRFSMPPFHMPHVPAPDSSRMQAANQSDNNMVTSAGPPDPNQSRIPNFTDPYQQYLGPHQMQFQLIQENK*

>Glyma.03g170300.21.p sequence-type=predicted peptide transcript=Glyma.03g170300.21 locus=Glyma.03g170300 id=Glyma.03g170300.21.p.Wm82.a4.v1 annot-version=Wm82.a4.v1
MTNNHNHCVPDFDIQMDHDHEYPILTPSALPRQKKPSIADDDIMELLWHNGQVVVQSQNQRSLRKLPPVTNSHDASPAGPSMTREIRPLVENFNQHLFMHEGEMASWLHYPIDDDEPALDQSFGADFLYSPPTTANNSSFMQTLGHTSQLTELRPMSANPRPPIPPPRRPEQRTPNFAYFSRHNTRAAEPSVKAAARESTVVDSCDTEAAASRVSETVRSAAEGGAGVAAPSTSAGGGRSTMMYDLTMTSSPGGSSSCDEPVQVAAAEEDRKRKGREAEEWECQSEDVDFESEAKKQVCGSTSTKRSRAAEVHNLSERRRRDRINEKMKALQELIPRCNKSDKASMLDEAISYLKSLQLQVQMMSMGCGMVPVMFPGIQQYMPAMGMGVGMGMGMEMGMNRPVMPFPNMLPGSALPAATAAAAHLGPRFSMPPFHMPHVPAPDSSRMQAANQSDNNMVTSAGPPDPNQSRIPNFTDPYQQYLGPHQMQFQLIQNQAMNQPNVSKPSNNGGPANPENH*






Funded by the USDA-ARS. Developed by the USDA-ARS SoyBase and Legume Clade Database group at the Iowa State University, Ames, IA
 
USDA Logo
Iowa State University Logo