SoyBase SoyBase transitions to NEW site on 10/1/2024
Integrating Genetics and Genomics to Advance Soybean Research

Report for Sequence Feature Glyma.03g161400

Feature Type:gene_model
Chromosome:Gm03
Start:38810952
stop:38813547
Source:JGI
Version:Wm82.a4.v1
High confidence:yes



Annotations for Glyma.03g161400
Database IDAnnotation TypeAnnotation DescriptionAnnotation SourceMatch ScoreEvidence Code
AT2G42430.1AT ASL18,LBD16 JGI N/AIEA
PTHR31529PantherFam LOB DOMAIN CONTAINING PROTEIN JGI N/AIEA
PF03195Pfam Lateral organ boundaries (LOB) domain JGI N/AIEA

Proteins Associated with Glyma.03g161400
LocusGene SymbolProtein Name
LBD14 LBD domain-containing transcription factor

Gene model name correspondences to Glyma.03g161400 Gene Call Version Wm82.a4.v1
Corresponding NameAnnotation VersionEvidenceComments
Glyma03g31830 Wm82.a1.v1.1IGC As supplied by JGI


Coding sequences of Glyma.03g161400
>Glyma.03g161400.1 sequence-type=CDS polypeptide=Glyma.03g161400.1.p locus=Glyma.03g161400 id=Glyma.03g161400.1.Wm82.a4.v1 annot-version=Wm82.a4.v1
ATGGCTTCTGCTAGTGGAAATGGTGTCTCTAATGGCTCTGGCTCTCCTTGCGGGGCATGCAAGTTCCTCAGAAGAAGGTGTGCTTCTGATTGTATCTTTGCACCTTACTTTTGTTCAGAACAGGGCCCTGCTAGATTTGCAGCCATACACAAGGTATTTGGTGCCAGCAACGTTTCAAAGTTGCTTTTGCACATACCAGCTCATGATCGTTGTGAAGCGGTTGTCACAATCACTTATGAGGCTCAGGCTCGTATTAGAGACCCTGTCTATGGCTGTGTCTCTCACATTTTTGCCTTACAACAACAGGTGGCACGCTTGCAGGCACAGCTGATGCAGGTAAAAGCTCAGCTGACTCAGAACCTAGTGGAGTCCAGGAACATAGAGAATAATCATCATTTGCAAGGGAATAATAACAATGTTACAGGACAACTAATGAATCATCCATTTTGTCCCACTTACATGAATCCTATATCTCCTCAAAGCTCACTTGAATCAATTGATCACAGCAGCATCAATGATGGAATGAGCATGCAAGATATACAAAGCAGAGAGGATTTCCAAATCCAAGCTAAAGAAAGACCATACAACAACAATGACTTGGGGGAGCTGCAAGAACTGGCACTAAGGATGATGAGGAACTGA
Predicted protein sequences of Glyma.03g161400
>Glyma.03g161400.1.p sequence-type=predicted peptide transcript=Glyma.03g161400.1 locus=Glyma.03g161400 id=Glyma.03g161400.1.p.Wm82.a4.v1 annot-version=Wm82.a4.v1
MASASGNGVSNGSGSPCGACKFLRRRCASDCIFAPYFCSEQGPARFAAIHKVFGASNVSKLLLHIPAHDRCEAVVTITYEAQARIRDPVYGCVSHIFALQQQVARLQAQLMQVKAQLTQNLVESRNIENNHHLQGNNNNVTGQLMNHPFCPTYMNPISPQSSLESIDHSSINDGMSMQDIQSREDFQIQAKERPYNNNDLGELQELALRMMRN*






Funded by the USDA-ARS. Developed by the USDA-ARS SoyBase and Legume Clade Database group at the Iowa State University, Ames, IA
 
USDA Logo
Iowa State University Logo