SoyBase SoyBase transitions to NEW site on 10/1/2024
Integrating Genetics and Genomics to Advance Soybean Research

Report for Sequence Feature Glyma.03g160000

Feature Type:gene_model
Chromosome:Gm03
Start:38684105
stop:38688892
Source:JGI
Version:Wm82.a4.v1
High confidence:yes



Annotations for Glyma.03g160000
Database IDAnnotation TypeAnnotation DescriptionAnnotation SourceMatch ScoreEvidence Code
AT3G04610.1AT FLK JGI N/AIEA
GO:0003723GO-mf RNA binding JGI N/AIEA
K13162KEGG Spliceosome JGI N/AIEA
KOG2190 KOG PolyC-binding proteins alphaCP-1 and related KH domain proteins JGI N/AIEA
PTHR10288PantherFam KH DOMAIN CONTAINING RNA BINDING PROTEIN JGI N/AIEA
PF00013Pfam KH domain JGI N/AIEA

Gene model name correspondences to Glyma.03g160000 Gene Call Version Wm82.a4.v1
Corresponding NameAnnotation VersionEvidenceComments
Glyma03g31670 Wm82.a1.v1.1IGC As supplied by JGI


Coding sequences of Glyma.03g160000
>Glyma.03g160000.2 sequence-type=CDS polypeptide=Glyma.03g160000.2.p locus=Glyma.03g160000 id=Glyma.03g160000.2.Wm82.a4.v1 annot-version=Wm82.a4.v1
ATGGCCGAGCACGATTTTGATGGACATGTTGTAGGATATGTGCCCGAGGACCCTAATTTTCCTCAGAATCATTCTGATGAACATGATGTAGGGACTGTGATTGATAGCTCTGGATTTCCTCACCTGCTGCCTGATGAAGATGATGCAGGCAATTTGGTGGAGGATGCCAATTTTCCTGAAAATCATTTTGATGGACATGAACATGATGTTGGAGGTTTTCCTGGGGACACGGACTCTCCACAGAAGGAGGAGCATGTTGAAGAAGGTCATGGTGCTGGAGATGTGCCTGAGGATTTTGATTCTCTGCTGAAACAGGAATCTGAGATTGATTCGAAAGGGAATGAAATTAAAAAGTGGCCCGGATGGCCTGGCGAGAATGTGTTCAGGATGTTGGTTCCGGTGCAAAAGGTTGGCAGTATTATTGGCCGAAAGGGCGAGTTTATAAAGAAAATTACAGAAGAGACTAAGGCGCGGATTAAAATTCTTGATGGTCCACCTGGAATCTCAGAAAGAGCAGTAATGGTTTCTGCAAAAGAAGAACCAGATCGTCCCATACCACCTGCTATTGATGGTTTGTTAAGGGTTCATAAGCAAGTTATCAATGTTGACCGTGACCTTGTGGATAGTGCTTTGGCAGCTGGGCGATCAGTTGTTACCAGGCTTCTAGTAGCAGATACTCAAGCAGGAAGCTTGATCGGAAAGCAGGGATCAACCATAAAATCCATTCAAGATGGCTCTGGTTGTACTATACGTGTTCTTGGATCAGAAAACCTGCCAGTATTTGCTTTGCGAGATGATAGTATTGTTGAAATACAAGGGGAATCTGCTGGTGTTCACAAGGCAGTTGAACTTATTGCAGTTCATTTACGCAAGTTCTTGGTTGACCGCAGCATAGTTGGAGTTTTTGAAACACAGATGCAAAGGCCAGATGTTAGAGTTAACCAGAATGTGCCACCACATCAAAATTGGGGTCCTCCTCCTCAAGGGTTTCCTGCTCCTGCTGGTGGTGGTGGTGGAGGACCTGCTTTTGCACCAAATCATCAATATATGCCACCTTCACATCACTATGATAGCTATTATCCACCTACTGAGTTGCCTCCCATGGACAAACACCTTCATCAAGGTCCACCACCTGCCTATGCAAAGGATGCTTCAATGGGAATTCATTCATCAAGTGCACCACCACAACAATCTGTTGTAACTAAGGTCACACAACACATGCAAATTCCTCTTACATATGCAGATGCTGTTATAGGAGCATCAGGCACAAATATCAGCTATATACGTCGTGCTAGTGGAGCAAGTATTACAATTCAGGAAACAAGGGGTGTGCCAGGTGAGATGACTGTTGAGATAAGCGGGACTTCTTCTCAAATACAGGCAGCCCAGCAGCTGGTTCAGAATTTCATGGCTGAAGCTGCAAGTGCTACACAGGATCCTATGGGGGGATCAGTCAGCCAAGGTTACAGTGCCTATCCAACAACTGCTCCAGTTTATGCTCCACCCACTAGTGCTGGTGGTGGTGGTCATACAGGCCATGCGCCTTCTGCAGATTATGGCCCCCTATATGGTACCAATTATGGGTATTAA

>Glyma.03g160000.4 sequence-type=CDS polypeptide=Glyma.03g160000.4.p locus=Glyma.03g160000 id=Glyma.03g160000.4.Wm82.a4.v1 annot-version=Wm82.a4.v1
ATGGCCGAGCACGATTTTGATGGACATGTTGTAGGATATGTGCCCGAGGACCCTAATTTTCCTCAGAATCATTCTGATGAACATGATGTAGGGACTGTGATTGATAGCTCTGGATTTCCTCACCTGCTGCCTGATGAAGATGATGCAGGCAATTTGGTGGAGGATGCCAATTTTCCTGAAAATCATTTTGATGGACATGAACATGATGTTGGAGGTTTTCCTGGGGACACGGACTCTCCACAGAAGGAGGAGCATGTTGAAGAAGGTCATGGTGCTGGAGATGTGCCTGAGGATTTTGATTCTCTGCTGAAACAGGAATCTGAGATTGATTCGAAAGGGAATGAAATTAAAAAGTGGCCCGGATGGCCTGGCGAGAATGTGTTCAGGATGTTGGTTCCGGTGCAAAAGGTTGGCAGTATTATTGGCCGAAAGGGCGAGTTTATAAAGAAAATTACAGAAGAGACTAAGGCGCGGATTAAAATTCTTGATGGTCCACCTGGAATCTCAGAAAGAGCAGTAATGGTTTCTGCAAAAGAAGAACCAGATCGTCCCATACCACCTGCTATTGATGGTTTGTTAAGGGTTCATAAGCAAGTTATCAATGTTGACCGTGACCTTGTGGATAGTGCTTTGGCAGCTGGGCGATCAGTTGTTACCAGGCTTCTAGTAGCAGATACTCAAGCAGGAAGCTTGATCGGAAAGCAGGGATCAACCATAAAATCCATTCAAGATGGCTCTGGTTGTACTATACGTGTTCTTGGATCAGAAAACCTGCCAGTATTTGCTTTGCGAGATGATAGTATTGTTGAAATACAAGGGGAATCTGCTGGTGTTCACAAGGCAGTTGAACTTATTGCAGTTCATTTACGCAAGTTCTTGGTTGACCGCAGCATAGTTGGAGTTTTTGAAACACAGATGCAAAGGCCAGATGTTAGAGTTAACCAGAATGTGCCACCACATCAAAATTGGGGTCCTCCTCCTCAAGGGTTTCCTGCTCCTGCTGGTGGTGGTGGTGGAGGACCTGCTTTTGCACCAAATCATCAATATATGCCACCTTCACATCACTATGATAGCTATTATCCACCTACTGAGTTGCCTCCCATGGACAAACACCTTCATCAAGGTCCACCACCTGCCTATGCAAAGGATGCTTCAATGGGAATTCATTCATCAAGTGCACCACCACAACAATCTGTTGTAACTAAGATGCTGTTATAG
Predicted protein sequences of Glyma.03g160000
>Glyma.03g160000.2.p sequence-type=predicted peptide transcript=Glyma.03g160000.2 locus=Glyma.03g160000 id=Glyma.03g160000.2.p.Wm82.a4.v1 annot-version=Wm82.a4.v1
MAEHDFDGHVVGYVPEDPNFPQNHSDEHDVGTVIDSSGFPHLLPDEDDAGNLVEDANFPENHFDGHEHDVGGFPGDTDSPQKEEHVEEGHGAGDVPEDFDSLLKQESEIDSKGNEIKKWPGWPGENVFRMLVPVQKVGSIIGRKGEFIKKITEETKARIKILDGPPGISERAVMVSAKEEPDRPIPPAIDGLLRVHKQVINVDRDLVDSALAAGRSVVTRLLVADTQAGSLIGKQGSTIKSIQDGSGCTIRVLGSENLPVFALRDDSIVEIQGESAGVHKAVELIAVHLRKFLVDRSIVGVFETQMQRPDVRVNQNVPPHQNWGPPPQGFPAPAGGGGGGPAFAPNHQYMPPSHHYDSYYPPTELPPMDKHLHQGPPPAYAKDASMGIHSSSAPPQQSVVTKVTQHMQIPLTYADAVIGASGTNISYIRRASGASITIQETRGVPGEMTVEISGTSSQIQAAQQLVQNFMAEAASATQDPMGGSVSQGYSAYPTTAPVYAPPTSAGGGGHTGHAPSADYGPLYGTNYGY*

>Glyma.03g160000.4.p sequence-type=predicted peptide transcript=Glyma.03g160000.4 locus=Glyma.03g160000 id=Glyma.03g160000.4.p.Wm82.a4.v1 annot-version=Wm82.a4.v1
MAEHDFDGHVVGYVPEDPNFPQNHSDEHDVGTVIDSSGFPHLLPDEDDAGNLVEDANFPENHFDGHEHDVGGFPGDTDSPQKEEHVEEGHGAGDVPEDFDSLLKQESEIDSKGNEIKKWPGWPGENVFRMLVPVQKVGSIIGRKGEFIKKITEETKARIKILDGPPGISERAVMVSAKEEPDRPIPPAIDGLLRVHKQVINVDRDLVDSALAAGRSVVTRLLVADTQAGSLIGKQGSTIKSIQDGSGCTIRVLGSENLPVFALRDDSIVEIQGESAGVHKAVELIAVHLRKFLVDRSIVGVFETQMQRPDVRVNQNVPPHQNWGPPPQGFPAPAGGGGGGPAFAPNHQYMPPSHHYDSYYPPTELPPMDKHLHQGPPPAYAKDASMGIHSSSAPPQQSVVTKMLL*






Funded by the USDA-ARS. Developed by the USDA-ARS SoyBase and Legume Clade Database group at the Iowa State University, Ames, IA
 
USDA Logo
Iowa State University Logo