Report for Sequence Feature Glyma.03g142100
Feature Type: gene_model
Chromosome: Gm03
Start: 35797319
stop: 35799467
Source: JGI
Version: Wm82.a2.v1
High confidence: yes
A previous version of this gene model can be found here:
Annotations for Glyma.03g142100
Database ID Annotation Type Annotation Description Annotation Source Match Score Evidence Code
AT5G06900.1 AT
cytochrome P450, family 93, subfamily D, polypeptide 1
JGI N/A IEA
GO:0044550 GO-bp
secondary metabolite biosynthetic process
EnsemblGenomes N/A IEA
GO:0055114 GO-bp
oxidation-reduction process
EnsemblGenomes N/A IEA
GO:0055114 GO-bp
oxidation-reduction process
JGI N/A IEA
GO:0016020 GO-cc
membrane
EnsemblGenomes N/A IEA
GO:0016021 GO-cc
integral component of membrane
EnsemblGenomes N/A IEA
GO:0004497 GO-mf
monooxygenase activity
EnsemblGenomes N/A IEA
GO:0005506 GO-mf
iron ion binding
EnsemblGenomes N/A IEA
GO:0005506 GO-mf
iron ion binding
JGI N/A IEA
GO:0009055 GO-mf
electron carrier activity
JGI N/A IEA
GO:0016491 GO-mf
oxidoreductase activity
EnsemblGenomes N/A IEA
GO:0016705 GO-mf
oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen
EnsemblGenomes N/A IEA
GO:0016705 GO-mf
oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen
JGI N/A IEA
GO:0016709 GO-mf
oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen, NAD(P)H as one donor, and incorporation of one atom of oxygen
EnsemblGenomes N/A IEA
GO:0020037 GO-mf
heme binding
EnsemblGenomes N/A IEA
GO:0020037 GO-mf
heme binding
JGI N/A IEA
GO:0046872 GO-mf
metal ion binding
EnsemblGenomes N/A IEA
KOG0156
KOG
Cytochrome P450 CYP2 subfamily
JGI N/A IEA
PTHR24298 Panther
FAMILY NOT NAMED
JGI N/A IEA
PTHR24298:SF44 Panther
JGI N/A IEA
PF00067 PFAM
Cytochrome P450
JGI N/A IEA
PWY-2055 SoyCyc9
superpathway of pterocarpan biosynthesis (via daidzein)
Plant Metabolic Network ISS
PWY-2761 SoyCyc9
(-)-glycinol biosynthesis
Plant Metabolic Network ISS
GN7V-52264 SoyCyc9-rxn
3,9-dihydroxypterocarpan 6a-monooxygenase
Plant Metabolic Network ISS
Proteins Associated with Glyma.03g142100
Locus Gene Symbol Protein Name
CYP93A3 cytochrome P450 93A3
Expression Patterns of Glyma.03g142100
Gene expression representations made with eFP at the University of Toronto. Waese et al. 2017, Plant Cell 29(8):1806-1821 ePlant: Visualizing and Exploring Multiple Levels of Data for Hypothesis Generation in Plant Biology
To see more experiments click HERE Related Legume Genes
Gene families from Phytozome are displayed using the PhyloTree viewer developed by LIS .
Gene information in GlycineMine developed by LIS .
Related Plant Genes
Gene families from PhyloGenes .
Paralogs of Glyma.03g142100
Paralog Evidence Comments
Glyma.19g144700 IGC Paralogs in soybean determined by Steven Cannon using BLAST, DAGChainer, PAML, and selection of gene pairs from synteny blocks with median Ks values of less than 0.35.
Gene model name correspondences to Glyma.03g142100 Gene Call Version Wm82.a2.v1
Corresponding Name Annotation Version Evidence Comments
Glyma03g29790 Wm82.a1.v1.1 IGC As supplied by JGI
Coding sequences of Glyma.03g142100
Show Sequence BLAST Sequence at SoyBase BLAST Sequence against GenBank NT Limit To All Plant Sequences
>Glyma.03g142100.1 sequence-type=CDS polypeptide=Glyma.03g142100.1.p locus=Glyma.03g142100 ID=Glyma.03g142100.1.Wm82.a2.v1 annot-version=Wm82.a2.v1
ATGGCTTTTCAAGTGTTGTTCATTTGTTTGATCTCAACCATCGTGTTTGCATCCATACTATGGAGAAAACAAAACAAAAACAAGACCCTTCTTCCACCGAGTCCAATGCCCCTACCCATCATTGGACACCTCCACCTTCTTTCTCCAACACCTCACCAAGATTTTCACAAGCTCTCACTCCGCTATGGACCCATAATACACCTTTTTCTTGGTTCAGTCCCCTGTGTGGTGGCTTCCACAGCAGAAGCCGCCAAAGAGTTCCTCAAAACTCACGAACCCGCCTTCTCCAACCGCCCCGCTAACACTGTCGCCGTCGAAACCTTAACCTACGGTTTCCAAGACTTCTTGTTCGCACCCTACGGACCCTATTGGAAGTTCATGAAGAAACTCTGCATGTCCGAACTCCTCGGTGGCCACATGCTGGACCAGTTTCTTCCCGTGAGACAGCAAGAGACAAAAAAATTCATCAAACGTGTCCTCCAAAAGGGTATTTCTGGTGAGGCCGTGGATTTTGGGGGAGAGTTCATCACGCTCTCGAACAACATCGTGTCGAGAATGATCGTGAGTCAGACGAGTACTACTGAGGACGAGAACGAAGTTGAAGAGATGAGGAAGCTGGTGAAGGATGCCGCAGAGCTCTCGGGGAAGTTCAACATATCGGACTTCGTTTCGTTCTTGAAGCGCTTTGATTTGCAGGGGTTCAACAAGAGGCTCGAGAAGATTCGGGACTGCTTTGACACCGTGTTGGACAGAATCATAAAGCAACGTGAAGAGGAAAGAAGGAACAAGAATGAAACCGTTGGAAAACGAGAATTTAAGGATATGCTTGATGTTTTGTTTGACATATCTGAAGATGAGAGTTCTGAAATTAAATTAAACAAAGAAAACATTAAGGCCTTCATCTTGGACATATTAATTGCTGGGACTGACACCTCAGCTGTAACGATGGAATGGGCTATGGCAGAGTTAATCAACAATCCAGGTGTGTTGGAGAAGGCAAGACAAGAAATGGATGCAGTGGTTGGAAAGAGTAGAATAGTAGAAGAATCAGATATTGCCAACCTTCCTTACTTGCAAGGCATTGTTAGAGAAACATTAAGACTTCACCCAGCTGGTCCATTGCTTTTTAGAGAGTCATCTAGAAGAGCTGTGGTTTGTGGGTATGATATTCCAGCAAAGACTCGATTATTTGTCAATGTTTGGGCTATTGGTAGGGACCCCAATCACTGGGAGAACCCTCTTGAGTTTAGGCCAGAGAGGTTTGTTGAAAATGGGAAGAGTCAATTGGATGTTAGGGGACAACATTATCATCTACTTCCGTTCGGTAGTGGAAGAAGAGCATGTCCTGGTACTTCTTTGGCATTGCAAGTTGTGCATGTGAATTTGGCAGTTCTAATTCAGTGTTTCCAATGGAAGGTTGACTGTGACAATGGCAAGGTGAACATGGAAGAAAAGGCTGGCATCACTCTTCCGAGGGCTCACCCCATAATTTGTGTCCCTATTCGAAGACTTAACCCATTCCCTGTTGTGTGA
Predicted protein sequences of Glyma.03g142100
Show Sequence BLAST Sequence at SoyBase BLAST Sequence against GenBank NR Limit To All Plant Sequences
>Glyma.03g142100.1.p sequence-type=predicted peptide transcript=Glyma.03g142100.1 locus=Glyma.03g142100 ID=Glyma.03g142100.1.Wm82.a2.v1 annot-version=Wm82.a2.v1
MAFQVLFICLISTIVFASILWRKQNKNKTLLPPSPMPLPIIGHLHLLSPTPHQDFHKLSLRYGPIIHLFLGSVPCVVASTAEAAKEFLKTHEPAFSNRPANTVAVETLTYGFQDFLFAPYGPYWKFMKKLCMSELLGGHMLDQFLPVRQQETKKFIKRVLQKGISGEAVDFGGEFITLSNNIVSRMIVSQTSTTEDENEVEEMRKLVKDAAELSGKFNISDFVSFLKRFDLQGFNKRLEKIRDCFDTVLDRIIKQREEERRNKNETVGKREFKDMLDVLFDISEDESSEIKLNKENIKAFILDILIAGTDTSAVTMEWAMAELINNPGVLEKARQEMDAVVGKSRIVEESDIANLPYLQGIVRETLRLHPAGPLLFRESSRRAVVCGYDIPAKTRLFVNVWAIGRDPNHWENPLEFRPERFVENGKSQLDVRGQHYHLLPFGSGRRACPGTSLALQVVHVNLAVLIQCFQWKVDCDNGKVNMEEKAGITLPRAHPIICVPIRRLNPFPVV*
SoyBase
SoyBase transitions to NEW site on 10/1/2024
