Glyma.03g137900

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Report for Sequence Feature Glyma.03g137900

Feature Type:	gene_model
Chromosome:	Gm03
Start:	35393011
stop:	35398758
Source:	JGI
Version:	Wm82.a2.v1
High confidence:	yes

A previous version of this gene model can be found here:

Annotations for Glyma.03g137900

Database ID	Annotation Type	Annotation Description	Annotation Source	Match Score	Evidence Code
AT3G57520.1	AT	seed imbibition 2	JGI	N/A	IEA
GO:0003824	GO-mf	catalytic activity	EnsemblGenomes	N/A	IEA
PF05691	PFAM	Raffinose synthase or seed imbibition protein Sip1	JGI	N/A	IEA
PWY-5337	SoyCyc9	stachyose biosynthesis	Plant Metabolic Network		ISS
PWY-6527	SoyCyc9	stachyose degradation	Plant Metabolic Network		ISS
GN7V-56545	SoyCyc9-rxn	Enzyme name not determined	Plant Metabolic Network		ISS

Proteins Associated with Glyma.03g137900

Locus	Gene Symbol	Protein Name
	RS	raffinose synthase

Expression Patterns of Glyma.03g137900

Gene expression representations made with eFP at the University of Toronto.
Waese et al. 2017, Plant Cell 29(8):1806-1821 ePlant: Visualizing and Exploring Multiple Levels of Data for Hypothesis Generation in Plant Biology

Glyma.03g137900 not represented in the dataset	Glyma.03g137900 not represented in the dataset
Libault et al. 2010, Plant Phys 152(2):541-552. Complete Transcriptome of the Soybean Root Hair Cell, a Single-Cell Model, and Its Alteration in Response to Bradyrhizobium japonicum Infection	Severin et al. 2010, BMC Plant Biology 10:160 RNA-Seq Atlas of Glycine max: A guide to the soybean transcriptome

To see more experiments click HERE

Related Legume Genes

Gene families from Phytozome are displayed using the PhyloTree viewer developed by LIS.

Gene information in GlycineMine developed by LIS.

Related Plant Genes

Gene families from PhyloGenes.

Gene model name correspondences to Glyma.03g137900 Gene Call Version Wm82.a2.v1

Corresponding Name	Annotation Version	Evidence	Comments
Glyma03g29440	Wm82.a1.v1.1	IGC	As supplied by JGI

Coding sequences of Glyma.03g137900

Limit To All Plant Sequences

>Glyma.03g137900.1 sequence-type=CDS polypeptide=Glyma.03g137900.1.p locus=Glyma.03g137900 ID=Glyma.03g137900.1.Wm82.a2.v1 annot-version=Wm82.a2.v1
ATGACTGTCACACCTAAGATCTCAGTTAACGATGGGAAACTTGTTGTCCATGGTAAGACCATTCTGACTGGAGTGCCAGACAACGTTGTGCTGACTCCAGGTTCTGGAAGGGGTCTTGTGACTGGTGCTTTTGTTGGTGCCACAGCTTCACACAGCAAAAGTCTCCATGTGTTTCCAATGGGTGTTTTAGAGGGGCTCCGGTTCATGTGTTGTTTCCGGTTCAAGTTATGGTGGATGACTCAGAGAATGGGAACTTGTGGGAGGGATGTTCCTCTGGAGACTCAATTCATGCTTATTGAGAGCAAAGAGAGTGAAACTGATGGGGAGAATTCTCCAATCATCTACACTGTCTTGCTTCCTCTCCTCGAAGGTCAATTCCGAGCTGTTCTTCAAGGCAATGACAAGAACGAGATAGAGATTTGCCTCGAGAGTGGGGATAATGCAGTTGAGACTGACCAAGGCCTTCACATGGTTTACATGCATGCTGGGACCAATCCCTTTGAAGTCATCAATCAAGCTGTCAAGGCTGTGGAAAAACACATGCAAACTTTTCTTCATCGTGAGAAGAAAAGGTTGCCATCTTGTCTTGACTGGTTTGGATGGTGCACATGGGATGCTTTCTATACTGATGTCACAGCTGAGGGTGTTGAGGAAGGCCTGAAAAGTCTATCACAGGGAGGTACACCTCCACGATTCCTCATCATAGATGATGGTTGGCAACAGATTGAAAATAAAGCAAAGGATGCTACTGAATGTTTGGTACAAGAAGGAGCACAGTTTGCTACTAGGTTGACTGGTATTAAAGAGAATACTAAATTTCAAAAGAAATTACAGAACAATGAGCAGATGTCAGGTCTGAAGCATCTAGTACATGGAGCAAAGCAGCATCACAATGTGAAAAATGTATATGTATGGCATGCACTAGCTGGTTATTGGGGTGGAGTGAAGCCAGCAGCAACCGGCATGGAACATTATGACACTGCCTTGGCATATCCAGTGCAGTCACCAGGCGTGCTAGGAAACCAACCAGACATTGTCATGGACAGCTTGGCTGTACATGGCCTTGGCCTAGTGCACCCAAAGAAGGTTTTCAATTTCTACAACGAGCTCCATGCTTACTTAGCTTCTTGTGGAGTAGATGGAGTGAAGGTTGATGTGCAGAACATTATTGAGACCCTTGGTGCGGGACATGGTGGCCGAGTGTCACTTACTCGCAGCTATCATCACGCGCTTGAGGCTTCCATTGCTAGCAATTTTACTGATAACGGATGCATTGCGTGTATGTGTCACAACACTGATGGACTTTATAGTGCTAAGCAGACTGCTATTGTGAGAGCTTCTGATGATTTTTACCCTCGTGATCCTGCTTCCCATACCATCCATATTTCTTCTGTTGCATACAACTCACTATTCCTTGGAGAATTCATGCAACCTGACTGGGACATGTTTCATAGTTTACACCCAGCAGCAGATTATCATGCTGCAGCTCGTGCAATTGGTGGATGTCCTATTTATGTTAGTGACAAGCCAGGCAATCACAATTTTGATCTTCTTAAGAAGCTGGTTCTCCCGGATGGTTCGGTTCTCCGTGCTCAGTTACCTGGCAGGCCAACTCGTGATTCTCTATTTGTGGATCCAGCCAGAGATAGGACTAGCTTGCTCAAAATATGGAACCTGAACAAATGCTCTGGAGTTGTTGGTGTATTTAACTGCCAAGGTGCTGGATGGTGCAAGATAGAGAAGAAAACCCGCATCCATGATACATCTCCTGGTACACTCACCGCCTCTGTCTGCGCCTCTGATGTTGACCTCATCACACAAGTAGCAGGTGCTGAATGGCTTGGAGATACAATTGTTTATGCTTACAGATCAGGTGAGGTGATTCGGCTACCAAAAGGGGTTTCAATTCCAGTGACACTAAAAGTTCTGGAGTTTGAGCTTTTCCACTTCTGTCCAATCCAAGAAATAGCTCCAAGTATATCATTTGCAGCAATAGGGCTACTGGATATGTTCAACACTGGAGGAGCAGTGGAGCAGGTTGAGATTCATAACCGAGCAGCAACGAAAACAATAGCTCTTAGTGTAAGGGGAAGAGGCAGATTTGGAGTTTACTCCTCCCAGAGACCACTGAAGTGTGTGGTAGGTGGCGCTGAAACCGACTTCAACTATGACTCAGAGACCGGGTTGACAACCTTCTCCATTCCAGTTTCTCCAGAGGAGATGTACAGATGGTCAATAGAGATCCAAGTTTGA

Predicted protein sequences of Glyma.03g137900

Limit To All Plant Sequences

>Glyma.03g137900.1.p sequence-type=predicted peptide transcript=Glyma.03g137900.1 locus=Glyma.03g137900 ID=Glyma.03g137900.1.Wm82.a2.v1 annot-version=Wm82.a2.v1
MTVTPKISVNDGKLVVHGKTILTGVPDNVVLTPGSGRGLVTGAFVGATASHSKSLHVFPMGVLEGLRFMCCFRFKLWWMTQRMGTCGRDVPLETQFMLIESKESETDGENSPIIYTVLLPLLEGQFRAVLQGNDKNEIEICLESGDNAVETDQGLHMVYMHAGTNPFEVINQAVKAVEKHMQTFLHREKKRLPSCLDWFGWCTWDAFYTDVTAEGVEEGLKSLSQGGTPPRFLIIDDGWQQIENKAKDATECLVQEGAQFATRLTGIKENTKFQKKLQNNEQMSGLKHLVHGAKQHHNVKNVYVWHALAGYWGGVKPAATGMEHYDTALAYPVQSPGVLGNQPDIVMDSLAVHGLGLVHPKKVFNFYNELHAYLASCGVDGVKVDVQNIIETLGAGHGGRVSLTRSYHHALEASIASNFTDNGCIACMCHNTDGLYSAKQTAIVRASDDFYPRDPASHTIHISSVAYNSLFLGEFMQPDWDMFHSLHPAADYHAAARAIGGCPIYVSDKPGNHNFDLLKKLVLPDGSVLRAQLPGRPTRDSLFVDPARDRTSLLKIWNLNKCSGVVGVFNCQGAGWCKIEKKTRIHDTSPGTLTASVCASDVDLITQVAGAEWLGDTIVYAYRSGEVIRLPKGVSIPVTLKVLEFELFHFCPIQEIAPSISFAAIGLLDMFNTGGAVEQVEIHNRAATKTIALSVRGRGRFGVYSSQRPLKCVVGGAETDFNYDSETGLTTFSIPVSPEEMYRWSIEIQV*

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