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Report for Sequence Feature Glyma.03g130300

Feature Type:gene_model
Chromosome:Gm03
Start:34514136
stop:34518638
Source:JGI
Version:Wm82.a2.v1
High confidence:yes



A previous version of this gene model can be found here:

Annotations for Glyma.03g130300
Database IDAnnotation TypeAnnotation DescriptionAnnotation SourceMatch ScoreEvidence Code
AT2G41250.1AT Haloacid dehalogenase-like hydrolase (HAD) superfamily protein JGI N/AIEA
GO:0008152GO-bp metabolic process EnsemblGenomesN/AIEA
GO:0016787GO-mf hydrolase activity EnsemblGenomesN/AIEA
KOG3085 KOG Predicted hydrolase (HAD superfamily) JGI N/AIEA
PTHR12725Panther HALOACID DEHALOGENASE-LIKE HYDROLASE JGI N/AIEA
PTHR12725:SF5Panther JGI N/AIEA
PF00702PFAM haloacid dehalogenase-like hydrolase JGI N/AIEA
GN7V-65737SoyCyc9-rxn N-acylneuraminate-9-phosphatase Plant Metabolic Network ISS

Expression Patterns of Glyma.03g130300
Gene expression representations made with eFP at the University of Toronto.
Waese et al. 2017, Plant Cell 29(8):1806-1821 ePlant: Visualizing and Exploring Multiple Levels of Data for Hypothesis Generation in Plant Biology
Libault et al. 2010, Plant Phys 152(2):541-552.
Complete Transcriptome of the Soybean Root Hair Cell, a Single-Cell Model, and Its Alteration in Response to Bradyrhizobium japonicum Infection 		Severin et al. 2010, BMC Plant Biology 10:160
RNA-Seq Atlas of Glycine max: A guide to the soybean transcriptome

To see more experiments click HERE

Related Legume Genes

View a gene family containing related genes from other legumes at LIS

Gene families from Phytozome are displayed using the PhyloTree viewer developed by LIS.


View gene and ortholog information at GlycineMine

Gene information in GlycineMine developed by LIS.


Related Plant Genes

View a gene family containing related genes from other plant species at PhyloGenes

Gene families from PhyloGenes.


Gene model name correspondences to Glyma.03g130300 Gene Call Version Wm82.a2.v1
Corresponding NameAnnotation VersionEvidenceComments
Glyma03g28600 Wm82.a1.v1.1IGC As supplied by JGI


Coding sequences of Glyma.03g130300
>Glyma.03g130300.1 sequence-type=CDS polypeptide=Glyma.03g130300.1.p locus=Glyma.03g130300 ID=Glyma.03g130300.1.Wm82.a2.v1 annot-version=Wm82.a2.v1
ATGGCTACAATCGCTGCCAGGATTCTCGGTTCCAACTCAAGGCCAGCGGTCGCGCTCCGCCGCTTGCGGTGGCCGGCGTACTCCTCCGCCTCCGCGGTGGTGGCGGAGCCGGAGACCACGGAGGTGAAGGACTACGCCGATTACCGCCGCTCCCTGTACGGACAGATCACGCACAAGGCGCTCCTCGTCGACGCCGTTGGCACGCTCGTTCTCCCCTCGCAGCCCATGGCTCAGATATATAGAAAGATTGGAGAGAAGTATGGAGTGGAGTATTCGGAAGATGAGATACTGTTCAGATATAGAAGAGCGTATGGTCAGCCTTGGGGAAAATCTCGTCTCAGATATGTTAATGATGGTAGGCCCTTTTGGCAATACATAGTTAGTTATTCTACTGGCTGCTCAGATCCTCAATACTTTGAAGAACTTTATAACTATTATACGACAGACAAGGCATGGCACCTCAATGATCCTGGCGCAGAAGAAGTATTCAGAGCTCTTAGAAAATCAGGTGTGAAATTAGCTGTTGTGTCAAACTTTGACACTAGATTAAGACCTCTCCTGCGGGCATTAAATTGTGACAATTGGTTTGATGCAGTAGCAGTGTCAGCTGAGGTTGCGGCGGAGAAACCAAATCCAACTATATTTCTCAAAGCATGTGAATTATTGGATGTAAAACCTGAGGATGCTGTTCATGTTGGGGATGACCGCAGAAATGATATATGGGGTGCCAGGGATGCTGGCTGTGATGCTTGGCTTTGGGGAAGCGATGTTCACTCCTTTAAGGAGGTAGCACAGAGGATTGGGGTTCAGGTCTGA
Predicted protein sequences of Glyma.03g130300
>Glyma.03g130300.1.p sequence-type=predicted peptide transcript=Glyma.03g130300.1 locus=Glyma.03g130300 ID=Glyma.03g130300.1.Wm82.a2.v1 annot-version=Wm82.a2.v1
MATIAARILGSNSRPAVALRRLRWPAYSSASAVVAEPETTEVKDYADYRRSLYGQITHKALLVDAVGTLVLPSQPMAQIYRKIGEKYGVEYSEDEILFRYRRAYGQPWGKSRLRYVNDGRPFWQYIVSYSTGCSDPQYFEELYNYYTTDKAWHLNDPGAEEVFRALRKSGVKLAVVSNFDTRLRPLLRALNCDNWFDAVAVSAEVAAEKPNPTIFLKACELLDVKPEDAVHVGDDRRNDIWGARDAGCDAWLWGSDVHSFKEVAQRIGVQV*






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