SoyBase SoyBase transitions to NEW site on 10/1/2024
Integrating Genetics and Genomics to Advance Soybean Research

Report for Sequence Feature Glyma.03g119500

Feature Type:gene_model
Chromosome:Gm03
Start:34252511
stop:34255720
Source:JGI
Version:Wm82.a4.v1
High confidence:yes



Annotations for Glyma.03g119500
Database IDAnnotation TypeAnnotation DescriptionAnnotation SourceMatch ScoreEvidence Code
AT3G56940.1AT ACSF,CHL27,CRD1 JGI N/AIEA
1.14.13.81EC magnesium-protoporphyrin IX monomethyl ester (oxidative) cyclase JGI N/AIEA
GO:0055114GO-bp obsolete oxidation-reduction process JGI N/AIEA
GO:0016491GO-mf oxidoreductase activity JGI N/AIEA
GO:0046872GO-mf metal ion binding JGI N/AIEA
K04035KEGG Porphyrin and chlorophyll metabolism JGI N/AIEA
PTHR31053PantherFam MAGNESIUM-PROTOPORPHYRIN IX MONOMETHYL ESTER [OXIDATIVE] CYCLASE, CHLOROPLASTIC JGI N/AIEA
PTHR31053:SF2PantherFam MAGNESIUM-PROTOPORPHYRIN IX MONOMETHYL ESTER [OXIDATIVE] CYCLASE, CHLOROPLASTIC JGI N/AIEA
PF02915Pfam Rubrerythrin JGI N/AIEA

Gene model name correspondences to Glyma.03g119500 Gene Call Version Wm82.a4.v1
Corresponding NameAnnotation VersionEvidenceComments
Glyma03g27380 Wm82.a1.v1.1IGC As supplied by JGI


Coding sequences of Glyma.03g119500
>Glyma.03g119500.1 sequence-type=CDS polypeptide=Glyma.03g119500.1.p locus=Glyma.03g119500 id=Glyma.03g119500.1.Wm82.a4.v1 annot-version=Wm82.a4.v1
ATGCTCCTCCTTAGTCCTCCTCAGCCTCAACTTCAACCTTTCTTCACTTCCCTTCACATGGCAGCTCTTGTGAAACCAATTTCCAATGTCACTCCCAAATTTGTCAGCAGCCCCAGAATGGGCTCATCACACTCCTCCAAATTCAGCACCATAATAAGAATGTCTGCCACTGCCACCCCACCACCATCCACCTCCACAAAGCCAGCAAGCAGCAAGAAGGGCAATATCAAGGAGACCCTCTTGACTCCAAGATTCTACACCACTGACTTTGATGAGATGGAGACACTCTTCAACACTGAGATCAACAAAAACCTCAACCAGGATGAGTTTGAGGCACTGCTCCAGGAGTTCAAGACTGACTACAACCAGACACACTTTGTCAGGAACAAGGAGTTCAAGGAAGCCGCTGACAAACTTGAGGGTCCCCTCAGACAGATCTTTGTGGAGTTCCTTGAGAGGTCCTGCACTGCTGAATTCTCTGGCTTCCTTCTCTACAAAGAGCTTGGAAGGAGGCTAAAGAAAACCAACCCTGTGGTGGCTGAGATTTTCTCACTGATGTCTAGGGATGAAGCCAGGCATGCTGGGTTTTTGAACAAGGGTTTATCTGATTTCAATTTGGCTCTGGACTTGGGTTTCTTGACCAAAGCTAGAAAATACACATTTTTCAAGCCAAAGTTTATCTTCTATGCTACATACTTGTCTGAGAAAATTGGGTACTGGAGATACATAACCATATACAGACATCTCAAGGCCAACCCTGAGTTTCAATGTTATCCCATTTTTAAGTACTTTGAGAACTGGTGCCAGGATGAGAACAGACATGGAGATTTCTTCTCTGCCCTGATGAAGGCACAGCCACAATTTCTAAATGACTGGAAGGCAAAGTTGTGGTCTCGATTCTTCTGTCTATCGGTTTATGTCACAATGTATCTCAATGATTGCCAACGTACAGCTTTCTACGAAGGCATTGGACTTAACACAAAAGAATTTGACATGCATGTCATTATCGAGACAAACCGCACAACTGCTCGGATTTTCCCAGCCGTTCTTGATGTTGAAAACCCAGAGTTCAAGCGGAAGTTGGACCGGATGGTGGAGATAAATGAGAAGCTTGTTGCTGTTGGTGAGAGCGATGACATAGCGGTGGTGAAGAACTTAAAGAGGATCCCACTGGTTGCTGCCTTGGTGTCTGAACTCTTGGCTACATATCTAATGCCTCCAATTGAGTCAGGGTCTGTAGATTTGGCAGAGTTTGAACCACAACTTGTGTACTAA

>Glyma.03g119500.2 sequence-type=CDS polypeptide=Glyma.03g119500.2.p locus=Glyma.03g119500 id=Glyma.03g119500.2.Wm82.a4.v1 annot-version=Wm82.a4.v1
ATGGCAGCTCTTGTGAAACCAATTTCCAATGTCACTCCCAAATTTGTCAGCAGCCCCAGAATGGGCTCATCACACTCCTCCAAATTCAGCACCATAATAAGAATGTCTGCCACTGCCACCCCACCACCATCCACCTCCACAAAGCCAGCAAGCAGCAAGAAGGGCAATATCAAGGAGACCCTCTTGACTCCAAGATTCTACACCACTGACTTTGATGAGATGGAGACACTCTTCAACACTGAGATCAACAAAAACCTCAACCAGGATGAGTTTGAGGCACTGCTCCAGGAGTTCAAGACTGACTACAACCAGACACACTTTGTCAGGAACAAGGAGTTCAAGGAAGCCGCTGACAAACTTGAGGGTCCCCTCAGACAGATCTTTGTGGAGTTCCTTGAGAGGTCCTGCACTGCTGAATTCTCTGGCTTCCTTCTCTACAAAGAGCTTGGAAGGAGGCTAAAGAAAACCAACCCTGTGGTGGCTGAGATTTTCTCACTGATGTCTAGGGATGAAGCCAGGCATGCTGGGTTTTTGAACAAGGGTTTATCTGATTTCAATTTGGCTCTGGACTTGGGTTTCTTGACCAAAGCTAGAAAATACACATTTTTCAAGCCAAAGTTTATCTTCTATGCTACATACTTGTCTGAGAAAATTGGGTACTGGAGATACATAACCATATACAGACATCTCAAGGCCAACCCTGAGTTTCAATGTTATCCCATTTTTAAGTACTTTGAGAACTGGTGCCAGGATGAGAACAGACATGGAGATTTCTTCTCTGCCCTGATGAAGGCACAGCCACAATTTCTAAATGACTGGAAGGCAAAGTTGTGGTCTCGATTCTTCTGTCTATCGTGCAAATCCAATGGATAA
Predicted protein sequences of Glyma.03g119500
>Glyma.03g119500.1.p sequence-type=predicted peptide transcript=Glyma.03g119500.1 locus=Glyma.03g119500 id=Glyma.03g119500.1.p.Wm82.a4.v1 annot-version=Wm82.a4.v1
MLLLSPPQPQLQPFFTSLHMAALVKPISNVTPKFVSSPRMGSSHSSKFSTIIRMSATATPPPSTSTKPASSKKGNIKETLLTPRFYTTDFDEMETLFNTEINKNLNQDEFEALLQEFKTDYNQTHFVRNKEFKEAADKLEGPLRQIFVEFLERSCTAEFSGFLLYKELGRRLKKTNPVVAEIFSLMSRDEARHAGFLNKGLSDFNLALDLGFLTKARKYTFFKPKFIFYATYLSEKIGYWRYITIYRHLKANPEFQCYPIFKYFENWCQDENRHGDFFSALMKAQPQFLNDWKAKLWSRFFCLSVYVTMYLNDCQRTAFYEGIGLNTKEFDMHVIIETNRTTARIFPAVLDVENPEFKRKLDRMVEINEKLVAVGESDDIAVVKNLKRIPLVAALVSELLATYLMPPIESGSVDLAEFEPQLVY*

>Glyma.03g119500.2.p sequence-type=predicted peptide transcript=Glyma.03g119500.2 locus=Glyma.03g119500 id=Glyma.03g119500.2.p.Wm82.a4.v1 annot-version=Wm82.a4.v1
MAALVKPISNVTPKFVSSPRMGSSHSSKFSTIIRMSATATPPPSTSTKPASSKKGNIKETLLTPRFYTTDFDEMETLFNTEINKNLNQDEFEALLQEFKTDYNQTHFVRNKEFKEAADKLEGPLRQIFVEFLERSCTAEFSGFLLYKELGRRLKKTNPVVAEIFSLMSRDEARHAGFLNKGLSDFNLALDLGFLTKARKYTFFKPKFIFYATYLSEKIGYWRYITIYRHLKANPEFQCYPIFKYFENWCQDENRHGDFFSALMKAQPQFLNDWKAKLWSRFFCLSCKSNG*






Funded by the USDA-ARS. Developed by the USDA-ARS SoyBase and Legume Clade Database group at the Iowa State University, Ames, IA
 
USDA Logo
Iowa State University Logo