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Report for Sequence Feature Glyma.03g097900

Feature Type:gene_model
Chromosome:Gm03
Start:28558709
stop:28567847
Source:JGI
Version:Wm82.a2.v1
High confidence:yes



A previous version of this gene model can be found here:

Annotations for Glyma.03g097900
Database IDAnnotation TypeAnnotation DescriptionAnnotation SourceMatch ScoreEvidence Code
AT5G64050.1AT glutamate tRNA synthetase JGI N/AIEA
GO:0006412GO-bp translation EnsemblGenomesN/AIEA
GO:0006418GO-bp tRNA aminoacylation for protein translation EnsemblGenomesN/AIEA
GO:0006424GO-bp glutamyl-tRNA aminoacylation EnsemblGenomesN/AIEA
GO:0043039GO-bp tRNA aminoacylation EnsemblGenomesN/AIEA
GO:0043039GO-bp tRNA aminoacylation JGI N/AIEA
GO:0005737GO-cc cytoplasm EnsemblGenomesN/AIEA
GO:0000049GO-mf tRNA binding EnsemblGenomesN/AIEA
GO:0000166GO-mf nucleotide binding EnsemblGenomesN/AIEA
GO:0004812GO-mf aminoacyl-tRNA ligase activity EnsemblGenomesN/AIEA
GO:0004818GO-mf glutamate-tRNA ligase activity EnsemblGenomesN/AIEA
GO:0005524GO-mf ATP binding EnsemblGenomesN/AIEA
GO:0005524GO-mf ATP binding JGI N/AIEA
GO:0008270GO-mf zinc ion binding EnsemblGenomesN/AIEA
GO:0016874GO-mf ligase activity EnsemblGenomesN/AIEA
KOG1149 KOG Glutamyl-tRNA synthetase (mitochondrial) JGI N/AIEA
PTHR10119Panther GLUTAMYL/GLUTAMINYL-TRNA SYNTHETASE JGI N/AIEA
PTHR10119:SF1Panther GLUTAMATE--TRNA LIGASE, MITOCHONDRIAL-RELATED JGI N/AIEA
PF00749PFAM tRNA synthetases class I (E and Q), catalytic domain JGI N/AIEA

Expression Patterns of Glyma.03g097900
Gene expression representations made with eFP at the University of Toronto.
Waese et al. 2017, Plant Cell 29(8):1806-1821 ePlant: Visualizing and Exploring Multiple Levels of Data for Hypothesis Generation in Plant Biology

Glyma.03g097900 not represented in the dataset
Glyma.03g097900 not represented in the dataset
Libault et al. 2010, Plant Phys 152(2):541-552.
Complete Transcriptome of the Soybean Root Hair Cell, a Single-Cell Model, and Its Alteration in Response to Bradyrhizobium japonicum Infection 		Severin et al. 2010, BMC Plant Biology 10:160
RNA-Seq Atlas of Glycine max: A guide to the soybean transcriptome

To see more experiments click HERE

Related Legume Genes

View a gene family containing related genes from other legumes at LIS

Gene families from Phytozome are displayed using the PhyloTree viewer developed by LIS.


View gene and ortholog information at GlycineMine

Gene information in GlycineMine developed by LIS.


Related Plant Genes

View a gene family containing related genes from other plant species at PhyloGenes

Gene families from PhyloGenes.


Gene model name correspondences to Glyma.03g097900 Gene Call Version Wm82.a2.v1
Corresponding NameAnnotation VersionEvidenceComments
Glyma03g23910 Wm82.a1.v1.1IGC As supplied by JGI


Transcripts of Glyma.03g097900
>Glyma.03g097900.2 sequence-type=transcript locus=Glyma.03g097900 ID=Glyma.03g097900.2.Wm82.a2.v1 annot-version=Wm82.a2.v1
CCAGTGTGAAGCAAAACAAAACAGAGAAAATGGCGCTGTTGTGTGGCGGCATGCCATGGTCGAAGGTGATAGTTCCTCCCATTTTCCACCACTCTCACACCCCTCGCACCTTCTTCTTCCAACGACGCCGTTTCTCAGTCTCTGCTCTCTCCGAACAACCACCACCCGTTCGCGTTCGTTTCGCTCCTTCTCCCACCGGAAACCTCCACGTCGGCGGTGCCCGAACGGCCCTCTTCAACTACTTGTTCGCAAGGTCCAAAGGTGGGAAATTTGTGCTGAGAATTGAGGACACTGACTTGGAGAGGTCCAGTAGGGAGTCTGAGGAGGCCATGCTCAAAGATCTTTCTTGGCTTGGACTTGATTGGGATGAAGGGCCTGGTGTTGGAGGGGATTATGGTCCTTATAGGCAGTCTGAGAGGAATTCTTTATACAAACAATATGCGGAGAACCTACACCAATCCGGTCATGTTTATCGCTGCTTCTGTTCTAATGAGGAACTAGAGAAAATGAAGGAGGTTGCTAAACTAAAGCAACTGCCTCCAGTGTACACAGGTAAATGGGCCAGTGCAACAAATGAGGAAGTAGAAGAGGAGCTAGAAAAAGGAACTCCTTACACATATCGGTTTCGAGTCCCTAAAGGAAGTTTAAAAATTAATGACCAAATACGAGGCGAAGTTAGTTGGAACTTGGATACACTTGGAGATTTTGTTATAATGAGGAGTAATGGTCAGCCTGTTTATAACTTTTGTGTAACGGTGGATGATGCAACCATGGCAATTTCCCATGTGATCAGGGCAGAGGAGCATTTACCAAACACTCTGAGGCAGGCATTGATATATAAGGCTCTAGGATTTCCAATGCCTTATTTTGCACATGTTTCTTTGATTTTAGCTCCTGATCGGAGTAAATTATCAAAACGACATGGGGCAACATCAGTGGGTCAGTTCCGGGAGATGGGATACCTACCGGAAGCAATGGTGAATTACCTAGCATTATTAGGTTGGGGCGATGGGACTGAAAATGAGTTTTTTACACTTGATCAACTTGTTGAAAAATTCACTATCGAACGTGTTAACAAAAGTGGTGCTATTTTTGACTCAACAAAGTTAAGGTGGATGAATGGTCAGCATTTAAGAGCACGTCCATCAGAGGAGTTGACCAAACTTATTGCAGAGTACTGGAAGACATCTGGCTTACTCACAGTATCAGATGGGCCCTTTATTGATCGAGTGATGATACATGGCTGACTAACAGGAAGCAGTTCACCTACTTAAGGATGGGATTGACTTGATAAATGATGCAGACAAGGCCCTTGCTAACTTGCTTTCTTATCCTGTGCATTCTACTTTACAGAGCGATGAAGCAGAATCTGTCTTGCTAGATAATCTTTCTGAATTTGCTGCTAGCCTCTTGGCTGCCTATGATAGTGGTGATCTGGTAGCAGCACTTGAAGAAGGCCATACCGGCTGGCAAAAGTGGGTGAAAGGCTTTGGAAAATCGCTAAAGCGCAAGGGAAAATCGCTTTTCATGCCGCTCCGACTTCTGTTGACCGGCAAACTCCATGGACCTGACATGGGGGCAAGTGTTGCATTGCTCTATAGAGCTGGGACTAGCAATGTAGTAGCTCCTGAATCTGGCTTTGTGACACTGGATGAAAGATTTAAAATGCTTAGGCAAATTGACTGGGAAGCATTGTCCAAGGACCAACCTGTCAAAGAGACTGCTGCTCCTGTCTAACTTAGAATTCACTTTCAAGGTCTATCAAATAATACCATGGTTTTACACATCTGTTTGGAGCCTTCTGttttttgttttttttttttCTGCAAATTTGACTAGAGAAGTCTGATTTGTAATATTTACCGAGGGATCTTTTATAGTCATATAATGAGTTCCATTTTGTTTAGGCAAGTTTTTATTTCAATGTGACTAGATATATTTCCTATTTTTGTAATTTGGAAACATGGATATTTTGGAGTGATGTTTTTTTTTAAATTATTTAAATAAGATATGGAACAGAGAAGCAGTATTTGCTTTTATATATATAAACTTAAGA
Coding sequences of Glyma.03g097900
>Glyma.03g097900.1 sequence-type=CDS polypeptide=Glyma.03g097900.1.p locus=Glyma.03g097900 ID=Glyma.03g097900.1.Wm82.a2.v1 annot-version=Wm82.a2.v1
ATGGCGCTGTTGTGTGGCGGCATGCCATGGTCGAAGGTGATAGTTCCTCCCATTTTCCACCACTCTCACACCCCTCGCACCTTCTTCTTCCAACGACGCCGTTTCTCAGTCTCTGCTCTCTCCGAACAACCACCACCCGTTCGCGTTCGTTTCGCTCCTTCTCCCACCGGAAACCTCCACGTCGGCGGTGCCCGAACGGCCCTCTTCAACTACTTGTTCGCAAGGTCCAAAGGTGGGAAATTTGTGCTGAGAATTGAGGACACTGACTTGGAGAGGTCCAGTAGGGAGTCTGAGGAGGCCATGCTCAAAGATCTTTCTTGGCTTGGACTTGATTGGGATGAAGGGCCTGGTGTTGGAGGGGATTATGGTCCTTATAGGCAGTCTGAGAGGAATTCTTTATACAAACAATATGCGGAGAACCTACACCAATCCGGTCATGTTTATCGCTGCTTCTGTTCTAATGAGGAACTAGAGAAAATGAAGGAGGTTGCTAAACTAAAGCAACTGCCTCCAGTGTACACAGGTAAATGGGCCAGTGCAACAAATGAGGAAGTAGAAGAGGAGCTAGAAAAAGGAACTCCTTACACATATCGGTTTCGAGTCCCTAAAGGAAGTTTAAAAATTAATGACCAAATACGAGGCGAAGTTAGTTGGAACTTGGATACACTTGGAGATTTTGTTATAATGAGGAGTAATGGTCAGCCTGTTTATAACTTTTGTGTAACGGTGGATGATGCAACCATGGCAATTTCCCATGTGATCAGGGCAGAGGAGCATTTACCAAACACTCTGAGGCAGGCATTGATATATAAGGCTCTAGGATTTCCAATGCCTTATTTTGCACATGTTTCTTTGATTTTAGCTCCTGATCGGAGTAAATTATCAAAACGACATGGGGCAACATCAGTGGGTCAGTTCCGGGAGATGGGATACCTACCGGAAGCAATGGTGAATTACCTAGCATTATTAGGTTGGGGCGATGGGACTGAAAATGAGTTTTTTACACTTGATCAACTTGTTGAAAAATTCACTATCGAACGTGTTAACAAAAGTGGTGCTATTTTTGACTCAACAAAGTTAAGGTGGATGAATGGTCAGCATTTAAGAGCACGTCCATCAGAGGAGTTGACCAAACTTATTGCAGAGTACTGGAAGACATCTGGCTTACTCACAGTATCAGATGGGCCCTTTATTGATGAAGCAGTTCACCTACTTAAGGATGGGATTGACTTGATAAATGATGCAGACAAGGCCCTTGCTAACTTGCTTTCTTATCCTGTGCATTCTACTTTACAGAGCGATGAAGCAGAATCTGTCTTGCTAGATAATCTTTCTGAATTTGCTGCTAGCCTCTTGGCTGCCTATGATAGTGGTGATCTGGTAGCAGCACTTGAAGAAGGCCATACCGGCTGGCAAAAGTGGGTGAAAGGCTTTGGAAAATCGCTAAAGCGCAAGGGAAAATCGCTTTTCATGCCGCTCCGACTTCTGTTGACCGGCAAACTCCATGGACCTGACATGGGGGCAAGTGTTGCATTGCTCTATAGAGCTGGGACTAGCAATGTAGTAGCTCCTGAATCTGGCTTTGTGACACTGGATGAAAGATTTAAAATGCTTAGGCAAATTGACTGGGAAGCATTGTCCAAGGACCAACCTGTCAAAGAGACTGCTGCTCCTGTCTAA

>Glyma.03g097900.2 sequence-type=CDS polypeptide=Glyma.03g097900.2.p locus=Glyma.03g097900 ID=Glyma.03g097900.2.Wm82.a2.v1 annot-version=Wm82.a2.v1
ATGGCGCTGTTGTGTGGCGGCATGCCATGGTCGAAGGTGATAGTTCCTCCCATTTTCCACCACTCTCACACCCCTCGCACCTTCTTCTTCCAACGACGCCGTTTCTCAGTCTCTGCTCTCTCCGAACAACCACCACCCGTTCGCGTTCGTTTCGCTCCTTCTCCCACCGGAAACCTCCACGTCGGCGGTGCCCGAACGGCCCTCTTCAACTACTTGTTCGCAAGGTCCAAAGGTGGGAAATTTGTGCTGAGAATTGAGGACACTGACTTGGAGAGGTCCAGTAGGGAGTCTGAGGAGGCCATGCTCAAAGATCTTTCTTGGCTTGGACTTGATTGGGATGAAGGGCCTGGTGTTGGAGGGGATTATGGTCCTTATAGGCAGTCTGAGAGGAATTCTTTATACAAACAATATGCGGAGAACCTACACCAATCCGGTCATGTTTATCGCTGCTTCTGTTCTAATGAGGAACTAGAGAAAATGAAGGAGGTTGCTAAACTAAAGCAACTGCCTCCAGTGTACACAGGTAAATGGGCCAGTGCAACAAATGAGGAAGTAGAAGAGGAGCTAGAAAAAGGAACTCCTTACACATATCGGTTTCGAGTCCCTAAAGGAAGTTTAAAAATTAATGACCAAATACGAGGCGAAGTTAGTTGGAACTTGGATACACTTGGAGATTTTGTTATAATGAGGAGTAATGGTCAGCCTGTTTATAACTTTTGTGTAACGGTGGATGATGCAACCATGGCAATTTCCCATGTGATCAGGGCAGAGGAGCATTTACCAAACACTCTGAGGCAGGCATTGATATATAAGGCTCTAGGATTTCCAATGCCTTATTTTGCACATGTTTCTTTGATTTTAGCTCCTGATCGGAGTAAATTATCAAAACGACATGGGGCAACATCAGTGGGTCAGTTCCGGGAGATGGGATACCTACCGGAAGCAATGGTGAATTACCTAGCATTATTAGGTTGGGGCGATGGGACTGAAAATGAGTTTTTTACACTTGATCAACTTGTTGAAAAATTCACTATCGAACGTGTTAACAAAAGTGGTGCTATTTTTGACTCAACAAAGTTAAGGTGGATGAATGGTCAGCATTTAAGAGCACGTCCATCAGAGGAGTTGACCAAACTTATTGCAGAGTACTGGAAGACATCTGGCTTACTCACAGTATCAGATGGGCCCTTTATTGATCGAGTGATGATACATGGCTGA
Predicted protein sequences of Glyma.03g097900
>Glyma.03g097900.1.p sequence-type=predicted peptide transcript=Glyma.03g097900.1 locus=Glyma.03g097900 ID=Glyma.03g097900.1.Wm82.a2.v1 annot-version=Wm82.a2.v1
MALLCGGMPWSKVIVPPIFHHSHTPRTFFFQRRRFSVSALSEQPPPVRVRFAPSPTGNLHVGGARTALFNYLFARSKGGKFVLRIEDTDLERSSRESEEAMLKDLSWLGLDWDEGPGVGGDYGPYRQSERNSLYKQYAENLHQSGHVYRCFCSNEELEKMKEVAKLKQLPPVYTGKWASATNEEVEEELEKGTPYTYRFRVPKGSLKINDQIRGEVSWNLDTLGDFVIMRSNGQPVYNFCVTVDDATMAISHVIRAEEHLPNTLRQALIYKALGFPMPYFAHVSLILAPDRSKLSKRHGATSVGQFREMGYLPEAMVNYLALLGWGDGTENEFFTLDQLVEKFTIERVNKSGAIFDSTKLRWMNGQHLRARPSEELTKLIAEYWKTSGLLTVSDGPFIDEAVHLLKDGIDLINDADKALANLLSYPVHSTLQSDEAESVLLDNLSEFAASLLAAYDSGDLVAALEEGHTGWQKWVKGFGKSLKRKGKSLFMPLRLLLTGKLHGPDMGASVALLYRAGTSNVVAPESGFVTLDERFKMLRQIDWEALSKDQPVKETAAPV*

>Glyma.03g097900.2.p sequence-type=predicted peptide transcript=Glyma.03g097900.2 locus=Glyma.03g097900 ID=Glyma.03g097900.2.Wm82.a2.v1 annot-version=Wm82.a2.v1
MALLCGGMPWSKVIVPPIFHHSHTPRTFFFQRRRFSVSALSEQPPPVRVRFAPSPTGNLHVGGARTALFNYLFARSKGGKFVLRIEDTDLERSSRESEEAMLKDLSWLGLDWDEGPGVGGDYGPYRQSERNSLYKQYAENLHQSGHVYRCFCSNEELEKMKEVAKLKQLPPVYTGKWASATNEEVEEELEKGTPYTYRFRVPKGSLKINDQIRGEVSWNLDTLGDFVIMRSNGQPVYNFCVTVDDATMAISHVIRAEEHLPNTLRQALIYKALGFPMPYFAHVSLILAPDRSKLSKRHGATSVGQFREMGYLPEAMVNYLALLGWGDGTENEFFTLDQLVEKFTIERVNKSGAIFDSTKLRWMNGQHLRARPSEELTKLIAEYWKTSGLLTVSDGPFIDRVMIHG*






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