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Report for Sequence Feature Glyma.03g084900

Feature Type:gene_model
Chromosome:Gm03
Start:24466511
stop:24467681
Source:JGI
Version:Wm82.a2.v1
High confidence:yes



A previous version of this gene model can be found here:

Annotations for Glyma.03g084900
Database IDAnnotation TypeAnnotation DescriptionAnnotation SourceMatch ScoreEvidence Code
AT1G12050.1AT fumarylacetoacetase, putative JGI N/AIEA
GO:0008152GO-bp metabolic process EnsemblGenomesN/AIEA
GO:0008152GO-bp metabolic process JGI N/AIEA
GO:0009072GO-bp aromatic amino acid family metabolic process EnsemblGenomesN/AIEA
GO:0003824GO-mf catalytic activity EnsemblGenomesN/AIEA
GO:0003824GO-mf catalytic activity JGI N/AIEA
GO:0004334GO-mf fumarylacetoacetase activity EnsemblGenomesN/AIEA
PTHR11820Panther FUMARYLACETOACETATE HYDROLASE JGI N/AIEA
PTHR11820:SF1Panther FUMARYLACETOACETASE JGI N/AIEA
PF01557PFAM Fumarylacetoacetate (FAA) hydrolase family JGI N/AIEA
GN7V-65056SoyCyc9-rxn fumarylacetoacetase Plant Metabolic Network ISS

Expression Patterns of Glyma.03g084900
Gene expression representations made with eFP at the University of Toronto.
Waese et al. 2017, Plant Cell 29(8):1806-1821 ePlant: Visualizing and Exploring Multiple Levels of Data for Hypothesis Generation in Plant Biology

Glyma.03g084900 not represented in the dataset
Glyma.03g084900 not represented in the dataset
Libault et al. 2010, Plant Phys 152(2):541-552.
Complete Transcriptome of the Soybean Root Hair Cell, a Single-Cell Model, and Its Alteration in Response to Bradyrhizobium japonicum Infection 		Severin et al. 2010, BMC Plant Biology 10:160
RNA-Seq Atlas of Glycine max: A guide to the soybean transcriptome

To see more experiments click HERE

Related Legume Genes

View a gene family containing related genes from other legumes at LIS

Gene families from Phytozome are displayed using the PhyloTree viewer developed by LIS.


View gene and ortholog information at GlycineMine

Gene information in GlycineMine developed by LIS.


Related Plant Genes

View a gene family containing related genes from other plant species at PhyloGenes

Gene families from PhyloGenes.


Gene model name correspondences to Glyma.03g084900 Gene Call Version Wm82.a2.v1
Corresponding NameAnnotation VersionEvidenceComments
Glyma03g20850 Wm82.a1.v1.1IGC As supplied by JGI


Coding sequences of Glyma.03g084900
>Glyma.03g084900.1 sequence-type=CDS polypeptide=Glyma.03g084900.1.p locus=Glyma.03g084900 ID=Glyma.03g084900.1.Wm82.a2.v1 annot-version=Wm82.a2.v1
ATGCCACTTTATGTGCATTCCAGAGGTCAAGCTCATCCAGTTGGCAGCTTTACCCCCTACTTTGGCCCTTCATTAAAGCTAGACTTTGAGTTGGAAATGGTTGAGGTTAAACATTGTTTCATTTTCTTCTTTGCTACTAATGTTGGACCGGGAAATGAATTGGGAAAACCTGTGGATATTAACTATGCTCAAGATCACATCTTTGGACTTGTTCTGCTGAATGACTGGAGTGGCATAGGGATATATTTCTCTTGGTCCATTTATTGTCCTAAGATAAAAACCTGGGCATTTGGACTTGCAATATATCCAACGTGGATGATTGCACGTACCATTTCCTCTAGATCACTTTATAGTTGCACAACAATATCACCTTGGATTGTGACCATGGAAGCATTAGAACCTTTTGCAAGAGAAACCCCAAAACAGGGCCTATGGACATTGGAAGGGGCAGACCCTAAGTTCTACAGTGCTGTAGCTGTGGAAGAATTCCCCTACTTCATTAATAAGATACCGGGTTTCTATCAAATTATAGCATATGGGACCGATAACAAAAACTTACAACAAAATTACTGA
Predicted protein sequences of Glyma.03g084900
>Glyma.03g084900.1.p sequence-type=predicted peptide transcript=Glyma.03g084900.1 locus=Glyma.03g084900 ID=Glyma.03g084900.1.Wm82.a2.v1 annot-version=Wm82.a2.v1
MPLYVHSRGQAHPVGSFTPYFGPSLKLDFELEMVEVKHCFIFFFATNVGPGNELGKPVDINYAQDHIFGLVLLNDWSGIGIYFSWSIYCPKIKTWAFGLAIYPTWMIARTISSRSLYSCTTISPWIVTMEALEPFARETPKQGLWTLEGADPKFYSAVAVEEFPYFINKIPGFYQIIAYGTDNKNLQQNY*






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