SoyBase SoyBase transitions to NEW site on 10/1/2024
Integrating Genetics and Genomics to Advance Soybean Research

Report for Sequence Feature Glyma.03g084000

Feature Type:gene_model
Chromosome:Gm03
Start:24651985
stop:24656026
Source:JGI
Version:Wm82.a4.v1
High confidence:yes



Annotations for Glyma.03g084000
Database IDAnnotation TypeAnnotation DescriptionAnnotation SourceMatch ScoreEvidence Code
AT3G25070.1AT RIN4 JGI N/AIEA
K13456KEGG Plant-pathogen interaction JGI N/AIEA
PTHR33159PantherFam RPM1-INTERACTING PROTEIN 4 (RIN4) FAMILY PROTEIN JGI N/AIEA
PTHR33159:SF6PantherFam RPM1-INTERACTING PROTEIN 4 JGI N/AIEA
PF05627Pfam Cleavage site for pathogenic type III effector avirulence factor Avr JGI N/AIEA

Proteins Associated with Glyma.03g084000
LocusGene SymbolProtein Name
RIN4a RIN4a protein

Gene model name correspondences to Glyma.03g084000 Gene Call Version Wm82.a4.v1
Corresponding NameAnnotation VersionEvidenceComments
Glyma03g19920 Wm82.a1.v1.1IGC As supplied by JGI


Coding sequences of Glyma.03g084000
>Glyma.03g084000.1 sequence-type=CDS polypeptide=Glyma.03g084000.1.p locus=Glyma.03g084000 id=Glyma.03g084000.1.Wm82.a4.v1 annot-version=Wm82.a4.v1
ATGGCACAACGTTCTCATGTACCCAAATTTGGCAATTGGGATAGTGGAGAGAATGTTCCTTATACAGCATATTTTGACAAGGCGCGGAAAGGTCGAACTGGGGCAAGGATAATAAATCCAAATGACCCTGAGGAAAATGCTGATTTAAGTCTGGATAATCCATCATCTGATCACCTACCTCCTACCAGACCCAGAGCTAATTCAGAGGATCAATCCGGAAAAGGATCATTGCCTTTGGAAGATGATCCTAAGCATTTTGTCGACTCTCCAGCTCGTCATGACAATGTAAGCAGTAGGAGTGGCAGTAGAAGCCACGGAGTAGGTTCTGCTGAAAACCGTAGAAGACATTCGACACAAAGTACTGGTTCCGAGTACAGTATTGAACGTTCACCACTTCATCGCCAGGCTAGAGCCCCTGGCAGAGACAGTCCCCAGTGGGAACCAAAGAATTCATATGACAACAGCCAGGGAACACCTGGGAGATCTCGGTTAAGACCGGTTAATCGAGGAGATGAAACACCGGATAAAGGTGCAGCTGTTCCAAAGTTTGGTGACTGGGATGTGAATAACCCATCATCAGCAGATGGCTTTACTCACATTTTCAACAAAGTGAGGGAGGAGAGACAGGGTGTCCCAGGACAAGTGCCGGGAACGCCTAATGAGAGACCACAAGCTATTAGGGGCCAATCTAACGATGACAAAGTCCAGTGTTGCTGCTTCGCATGGGGGGGCAAAAAATGA
Predicted protein sequences of Glyma.03g084000
>Glyma.03g084000.1.p sequence-type=predicted peptide transcript=Glyma.03g084000.1 locus=Glyma.03g084000 id=Glyma.03g084000.1.p.Wm82.a4.v1 annot-version=Wm82.a4.v1
MAQRSHVPKFGNWDSGENVPYTAYFDKARKGRTGARIINPNDPEENADLSLDNPSSDHLPPTRPRANSEDQSGKGSLPLEDDPKHFVDSPARHDNVSSRSGSRSHGVGSAENRRRHSTQSTGSEYSIERSPLHRQARAPGRDSPQWEPKNSYDNSQGTPGRSRLRPVNRGDETPDKGAAVPKFGDWDVNNPSSADGFTHIFNKVREERQGVPGQVPGTPNERPQAIRGQSNDDKVQCCCFAWGGKK*






Funded by the USDA-ARS. Developed by the USDA-ARS SoyBase and Legume Clade Database group at the Iowa State University, Ames, IA
 
USDA Logo
Iowa State University Logo