SoyBase SoyBase transitions to NEW site on 10/1/2024
Integrating Genetics and Genomics to Advance Soybean Research

Report for Sequence Feature Glyma.03g078700

Feature Type:gene_model
Chromosome:Gm03
Start:20954310
stop:20957644
Source:JGI
Version:Wm82.a4.v1
High confidence:yes



Annotations for Glyma.03g078700
Database IDAnnotation TypeAnnotation DescriptionAnnotation SourceMatch ScoreEvidence Code
AT4G00430.1AT PIP1;4,PIP1E,TMP-C JGI N/AIEA
GO:0006810GO-bp transport JGI N/AIEA
GO:0016020GO-cc membrane JGI N/AIEA
GO:0005215GO-mf transporter activity JGI N/AIEA
K09872KEGG Transporters JGI N/AIEA
KOG0223 KOG Aquaporin (major intrinsic protein family) JGI N/AIEA
PTHR19139PantherFam AQUAPORIN TRANSPORTER JGI N/AIEA
PF00230Pfam Major intrinsic protein JGI N/AIEA

Proteins Associated with Glyma.03g078700
LocusGene SymbolProtein Name
PIP1-1 aquaporin PIP1-1

Gene model name correspondences to Glyma.03g078700 Gene Call Version Wm82.a4.v1
Corresponding NameAnnotation VersionEvidenceComments
Glyma03g14150 Wm82.a1.v1.1IGC As supplied by JGI


Coding sequences of Glyma.03g078700
>Glyma.03g078700.1 sequence-type=CDS polypeptide=Glyma.03g078700.1.p locus=Glyma.03g078700 id=Glyma.03g078700.1.Wm82.a4.v1 annot-version=Wm82.a4.v1
ATGGAGGGAAAAGAAGAGGACGTAAGAGTTGGAGCCAACAGGTACGGAGAGAGGCAGCCAATAGGGACCGCTGCTCAGGCTAAAGACTACAGAGAGCCACCGTCGGCGCCTCTCTTCGAACCGGGAGAGTTGTCATCGTGGTCTTTCTATAGGGCTGGCATAGCAGAGTTTGTGGCCACTTTCTTGTTCCTCTACATCACAGTGCTGACTGTGATGGGTGTGTTCAAATCTAAGAGCAAGTGTTCCACTGTGGGTATCCAAGGCATTGCTTGGGCTTTTGGGGGAATGATCTTTGCTCTTGTTTATTCCACTGCTGGAATCTCAGGGGGTCATATTAACCCAGCAGTGACGTTTGGGCTGTTCTTGGCACGCAAGCTCTCTCTGACAAGGGCAATTTTTTACATAATCATGCAGTGCTTGGGAGCTATATGTGGTGCTGGTGTAGTTAAGGGGTTCGAGCCACACCTCTATGAGAGGCTTGGTGGTGGTGCCAACACAATCGCTAAAGGGTACACCAATAGTGCTGGCCTTGGAGCAGAGATTGTTGGCACATTTGTGCTTGTTTACACTGTCTTCTCTGCCACTGATGCCAAAAGAAATGCTAGAGACTCCCATGTTCCAATTTTGGCACCACTGCCTATTGGTTTTGCTGTGTTTCTAGTGCATTTGGCTACAATTCCTGTTACAGGGACTGGTATCAACCCTGCTAGAAGTCTAGGTGCAGCCATTATCTTCAACAAGGACCAAGCTTGGGATGACCATTGGATATTTTGGGTTGGGCCTTTCATTGGGGCAGCACTTGCAGCTTTGTACCATCAGATAGTGATCAGGGCCATCCCCTTCTCGTCGAAGTGA
Predicted protein sequences of Glyma.03g078700
>Glyma.03g078700.1.p sequence-type=predicted peptide transcript=Glyma.03g078700.1 locus=Glyma.03g078700 id=Glyma.03g078700.1.p.Wm82.a4.v1 annot-version=Wm82.a4.v1
MEGKEEDVRVGANRYGERQPIGTAAQAKDYREPPSAPLFEPGELSSWSFYRAGIAEFVATFLFLYITVLTVMGVFKSKSKCSTVGIQGIAWAFGGMIFALVYSTAGISGGHINPAVTFGLFLARKLSLTRAIFYIIMQCLGAICGAGVVKGFEPHLYERLGGGANTIAKGYTNSAGLGAEIVGTFVLVYTVFSATDAKRNARDSHVPILAPLPIGFAVFLVHLATIPVTGTGINPARSLGAAIIFNKDQAWDDHWIFWVGPFIGAALAALYHQIVIRAIPFSSK*






Funded by the USDA-ARS. Developed by the USDA-ARS SoyBase and Legume Clade Database group at the Iowa State University, Ames, IA
 
USDA Logo
Iowa State University Logo