SoyBase SoyBase transitions to NEW site on 10/1/2024
Integrating Genetics and Genomics to Advance Soybean Research

Report for Sequence Feature Glyma.03g073300

Feature Type:gene_model
Chromosome:Gm03
Start:17456273
stop:17469810
Source:JGI
Version:Wm82.a4.v1
High confidence:yes



Annotations for Glyma.03g073300
Database IDAnnotation TypeAnnotation DescriptionAnnotation SourceMatch ScoreEvidence Code
AT1G16470.1AT PAB1 JGI N/AIEA
3.4.25.1EC proteasome endopeptidase complex JGI N/AIEA
GO:0006511GO-bp ubiquitin-dependent protein catabolic process JGI N/AIEA
GO:0051603GO-bp proteolysis involved in cellular protein catabolic process JGI N/AIEA
GO:0005839GO-cc proteasome core complex JGI N/AIEA
GO:0019773GO-cc proteasome core complex, alpha-subunit complex JGI N/AIEA
GO:0004175GO-mf endopeptidase activity JGI N/AIEA
GO:0004298GO-mf threonine-type endopeptidase activity JGI N/AIEA
K02726KEGG Proteasome JGI N/AIEA
KOG0181 KOG 20S proteasome, regulatory subunit alpha type PSMA2/PRE8 JGI N/AIEA
PTHR11599PantherFam PROTEASOME SUBUNIT ALPHA/BETA JGI N/AIEA
PTHR11599:SF16PantherFam PROTEASOME SUBUNIT ALPHA TYPE-2 JGI N/AIEA
PF00227Pfam Proteasome subunit JGI N/AIEA
PF10584Pfam Proteasome subunit A N-terminal signature JGI N/AIEA

Gene model name correspondences to Glyma.03g073300 Gene Call Version Wm82.a4.v1
Corresponding NameAnnotation VersionEvidenceComments
Glyma03g16660 Wm82.a1.v1.1IGC As supplied by JGI


Coding sequences of Glyma.03g073300
>Glyma.03g073300.4 sequence-type=CDS polypeptide=Glyma.03g073300.4.p locus=Glyma.03g073300 id=Glyma.03g073300.4.Wm82.a4.v1 annot-version=Wm82.a4.v1
ATGGGGGATAGTCAGTATTCGTTTTCTCTCACCACATTTAGCCCTTCTGGAAAGCTTGTTCAGATTGAGCATGCTTTGACAGCCGTTGGCTCTGGACAAACGTCTTTGGGAATAAAAGCTGCAAATGGAGTTGTCATTGCTACCGAGAAGAAATTGCCATCTATATTGGTTGATGAAACATCAGTCCAGAAAATTCAGTTATTAACACCAAATATAGGTGTCGTATATAGTGGCATGGGTCCCGATTTTCGAGTTTTGGTTCGAAAAAGCAGGAAACAAGCTGAGCAGTATCATCGGTTATATAAAGAACCAATTCCTGTCAATCAACTTGTTAGGGAAGTTGCTGCCGTAATGCAGGAATTTACTCAGTCTGGTGGTGTTAGGCCTTTTGGAGTGTCACTGCTAGTTGCTGGATTTGATGATAATGGACCACAATTATATCAGGTGGATCCATCAGGTTCATATTTTTCTTGGAAAGCTTCTGCTATGGGGAAAAATGTTTCTAATGCAAAGACTTTTCTTGAGAAGAGGTACACAGATGATATGGAGCTTGATGATTCAGTCCACACAGCAATATTGACTCTGAAGGAAGGGTTTGAGGGACAGATCTCAGGAAAAAACATTGAAATTGGCATAATCGGTGCTGATAAAAATTTCAGGGTATTGACACCAGCCGAAATTGATGATTATTTGGCTGAAGTAGAATAA
Predicted protein sequences of Glyma.03g073300
>Glyma.03g073300.4.p sequence-type=predicted peptide transcript=Glyma.03g073300.4 locus=Glyma.03g073300 id=Glyma.03g073300.4.p.Wm82.a4.v1 annot-version=Wm82.a4.v1
MGDSQYSFSLTTFSPSGKLVQIEHALTAVGSGQTSLGIKAANGVVIATEKKLPSILVDETSVQKIQLLTPNIGVVYSGMGPDFRVLVRKSRKQAEQYHRLYKEPIPVNQLVREVAAVMQEFTQSGGVRPFGVSLLVAGFDDNGPQLYQVDPSGSYFSWKASAMGKNVSNAKTFLEKRYTDDMELDDSVHTAILTLKEGFEGQISGKNIEIGIIGADKNFRVLTPAEIDDYLAEVE*






Funded by the USDA-ARS. Developed by the USDA-ARS SoyBase and Legume Clade Database group at the Iowa State University, Ames, IA
 
USDA Logo
Iowa State University Logo