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Report for Sequence Feature Glyma.03g070300

Feature Type:gene_model
Chromosome:Gm03
Start:16324083
stop:16330477
Source:JGI
Version:Wm82.a2.v1
High confidence:yes



A previous version of this gene model can be found here:

Annotations for Glyma.03g070300
Database IDAnnotation TypeAnnotation DescriptionAnnotation SourceMatch ScoreEvidence Code
AT5G09640.1AT serine carboxypeptidase-like 19 JGI N/AIEA
GO:0006508GO-bp proteolysis EnsemblGenomesN/AIEA
GO:0006508GO-bp proteolysis JGI N/AIEA
GO:0019748GO-bp secondary metabolic process EnsemblGenomesN/AIEA
GO:0004185GO-mf serine-type carboxypeptidase activity EnsemblGenomesN/AIEA
GO:0004185GO-mf serine-type carboxypeptidase activity JGI N/AIEA
GO:0016747GO-mf transferase activity, transferring acyl groups other than amino-acyl groups EnsemblGenomesN/AIEA
KOG1282 KOG Serine carboxypeptidases (lysosomal cathepsin A) JGI N/AIEA
PTHR11802Panther SERINE PROTEASE FAMILY S10 SERINE CARBOXYPEPTIDASE JGI N/AIEA
PTHR11802:SF7Panther JGI N/AIEA
PF00450PFAM Serine carboxypeptidase JGI N/AIEA
PWY-7280SoyCyc9 ternatin C3 biosynthesis Plant Metabolic Network ISS
GN7V-42523SoyCyc9-rxn delphinidin 3-(6"-malonyl)glucoside-3',5'-diglucoside-6"'-p-coumaroyltransferase Plant Metabolic Network ISS

Expression Patterns of Glyma.03g070300
Gene expression representations made with eFP at the University of Toronto.
Waese et al. 2017, Plant Cell 29(8):1806-1821 ePlant: Visualizing and Exploring Multiple Levels of Data for Hypothesis Generation in Plant Biology
Libault et al. 2010, Plant Phys 152(2):541-552.
Complete Transcriptome of the Soybean Root Hair Cell, a Single-Cell Model, and Its Alteration in Response to Bradyrhizobium japonicum Infection 		Severin et al. 2010, BMC Plant Biology 10:160
RNA-Seq Atlas of Glycine max: A guide to the soybean transcriptome

To see more experiments click HERE

Related Legume Genes

View a gene family containing related genes from other legumes at LIS

Gene families from Phytozome are displayed using the PhyloTree viewer developed by LIS.


View gene and ortholog information at GlycineMine

Gene information in GlycineMine developed by LIS.


Related Plant Genes

View a gene family containing related genes from other plant species at PhyloGenes

Gene families from PhyloGenes.


Gene model name correspondences to Glyma.03g070300 Gene Call Version Wm82.a2.v1
Corresponding NameAnnotation VersionEvidenceComments
Glyma03g17920 Wm82.a1.v1.1IGC As supplied by JGI


Coding sequences of Glyma.03g070300
>Glyma.03g070300.1 sequence-type=CDS polypeptide=Glyma.03g070300.1.p locus=Glyma.03g070300 ID=Glyma.03g070300.1.Wm82.a2.v1 annot-version=Wm82.a2.v1
ATGTTTTGCAATTTTCACATTATTCTTCTAATTGCTCTTGCACTTTTGGTACAAATATCATCTCAGCTTGGCTCCAAGGTAGAAGTGCTTCCTGGCTTTGAAGGCCCTCTTCCTTTTGAACTGGAAACAGGGTACGTTGGATTAGGAGAAAAAGATGATGACATGCAAGTGTTTTACTACTTTGTTAAGTCAGAAAATGATCCTCAGAAAGACCCTCTTATGCTTTGGCTAACTGGTGGTCCTGGCTGCTCTTCATTTTCAGGTCTTGCCTTTCAAATAGGTCCACTTCGATTCAAGATTGAGGAGTATGATGGGAGTGTGCCAAATTTGATCTTGAGGCCACAGTCCTGGACAAAGGTTTGCAACATTATTTTTGTAGATTTGCCTTTTGGAACTGGCTTCTCATATGCAAAAAATCTCACTGCTCAACGGAGTGACTGGAAATTAGTTCACCATACCCATCAATTTCTTAGGAAGTGGCTGATTGATCACCCAGAATTTCTTTCAAATGAATTTTATATGGGAGCTGATTCTTATTCTGGCATACCTGCCCCTGCTATTGTTCAAGAGATTTCAAATGGAAATGAAAAAGGTCTCCAACCACGGATAAATCTCCAGGGATATCTGCTAGGGAACCCCATAACAACAAGAAATGAAGGAAATGATCAAATCCCATTTGCTCATGGAATGGGACTTATTTCTGATGAACTATATGCGTCACTTCAGAGAAATTGTAAAGGAGAGTATGAAAATAGAGATTCCAGAAATGTGTTGTGTTTAAGAGATCTCAAACACTATGATGAGTGCCTTTCAGGAATCAATACTTTCTATATTTTGGATCGCTATTGTAAATCTGATTCGCCTAAAAAACATGAAGCTCAGTGGAGGAGATCTCTGACTCAGAAGTTTGAGGCCTCTCTTAATTCTCATCTCAGAGTGCCAGACATAAGATGCCAAATTTTTGGGTTTTTCCTTGCCACTCAATGGGCCAATGACGAAAGTGTTCGCAAGTCACTGCATATTCGAGAGGGAACTATAGGCAAATGGGAACGTTGTTACACTACAGATTTTGAGGAACAGATCTTCAGTAGCTTTGAGTTTCATGTAAATCTCAGTGGAAAAGGATATCGTTCTTTAATATACAGTGGAGATCATGATGCAGTTGTTCCTTTCATGTCAACCCAAGCATGGATTAGGGCTCTAAACTACTCCATTGTGGAAGATTGGAGGCCATGGCTTCTAGAAGACCAAGTTGCAGGATACACAAGGACTTACTCGAATCAAATGACATTTGCAACTGTGAAGGGTTCAGGACATACAGCTCCAGAGTACAAGCCTGAGGAAGGTTTTGCCATGTTCAGTAGATGGATAGCTAATATGCCTTTGTAA
Predicted protein sequences of Glyma.03g070300
>Glyma.03g070300.1.p sequence-type=predicted peptide transcript=Glyma.03g070300.1 locus=Glyma.03g070300 ID=Glyma.03g070300.1.Wm82.a2.v1 annot-version=Wm82.a2.v1
MFCNFHIILLIALALLVQISSQLGSKVEVLPGFEGPLPFELETGYVGLGEKDDDMQVFYYFVKSENDPQKDPLMLWLTGGPGCSSFSGLAFQIGPLRFKIEEYDGSVPNLILRPQSWTKVCNIIFVDLPFGTGFSYAKNLTAQRSDWKLVHHTHQFLRKWLIDHPEFLSNEFYMGADSYSGIPAPAIVQEISNGNEKGLQPRINLQGYLLGNPITTRNEGNDQIPFAHGMGLISDELYASLQRNCKGEYENRDSRNVLCLRDLKHYDECLSGINTFYILDRYCKSDSPKKHEAQWRRSLTQKFEASLNSHLRVPDIRCQIFGFFLATQWANDESVRKSLHIREGTIGKWERCYTTDFEEQIFSSFEFHVNLSGKGYRSLIYSGDHDAVVPFMSTQAWIRALNYSIVEDWRPWLLEDQVAGYTRTYSNQMTFATVKGSGHTAPEYKPEEGFAMFSRWIANMPL*






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