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Report for Sequence Feature Glyma.03g065800

Feature Type:gene_model
Chromosome:Gm03
Start:11996742
stop:11997277
Source:JGI
Version:Wm82.a2.v1
High confidence:yes



A previous version of this gene model can be found here:

Annotations for Glyma.03g065800
Database IDAnnotation TypeAnnotation DescriptionAnnotation SourceMatch ScoreEvidence Code
AT2G38660.1AT Amino acid dehydrogenase family protein JGI N/AIEA
GO:0006730GO-bp one-carbon metabolic process EnsemblGenomesN/AIEA
GO:0009396GO-bp folic acid-containing compound biosynthetic process JGI N/AIEA
GO:0055114GO-bp oxidation-reduction process EnsemblGenomesN/AIEA
GO:0055114GO-bp oxidation-reduction process JGI N/AIEA
GO:0005829GO-cc cytosol EnsemblGenomesN/AIEA
GO:0003824GO-mf catalytic activity JGI N/AIEA
GO:0004477GO-mf methenyltetrahydrofolate cyclohydrolase activity EnsemblGenomesN/AIEA
GO:0004488GO-mf methylenetetrahydrofolate dehydrogenase (NADP+) activity EnsemblGenomesN/AIEA
GO:0004488GO-mf methylenetetrahydrofolate dehydrogenase (NADP+) activity JGI N/AIEA
PTHR10025Panther TETRAHYDROFOLATE DEHYDROGENASE/CYCLOHYDROLASE FAMILY MEMBER JGI N/AIEA
PF02882PFAM Tetrahydrofolate dehydrogenase/cyclohydrolase, NAD(P)-binding domain JGI N/AIEA
PWY-3841SoyCyc9 folate transformations II Plant Metabolic Network ISS
PWY-6613SoyCyc9 tetrahydrofolate salvage from 5,10-methenyltetrahydrofolate Plant Metabolic Network ISS
PWY-7909SoyCyc9 formaldehyde oxidation VII (THF pathway) Plant Metabolic Network ISS
GN7V-48615SoyCyc9-rxn methylenetetrahydrofolate dehydrogenase (NADP+) Plant Metabolic Network ISS

Expression Patterns of Glyma.03g065800
Gene expression representations made with eFP at the University of Toronto.
Waese et al. 2017, Plant Cell 29(8):1806-1821 ePlant: Visualizing and Exploring Multiple Levels of Data for Hypothesis Generation in Plant Biology

Glyma.03g065800 not represented in the dataset
Glyma.03g065800 not represented in the dataset
Libault et al. 2010, Plant Phys 152(2):541-552.
Complete Transcriptome of the Soybean Root Hair Cell, a Single-Cell Model, and Its Alteration in Response to Bradyrhizobium japonicum Infection 		Severin et al. 2010, BMC Plant Biology 10:160
RNA-Seq Atlas of Glycine max: A guide to the soybean transcriptome

To see more experiments click HERE

Related Legume Genes

View a gene family containing related genes from other legumes at LIS

Gene families from Phytozome are displayed using the PhyloTree viewer developed by LIS.


View gene and ortholog information at GlycineMine

Gene information in GlycineMine developed by LIS.


Related Plant Genes

View a gene family containing related genes from other plant species at PhyloGenes

Gene families from PhyloGenes.


Gene model name correspondences to Glyma.03g065800 Gene Call Version Wm82.a2.v1
Corresponding NameAnnotation VersionEvidenceComments
Glyma03g10355 Wm82.a1.v1.1IGC As supplied by JGI


Coding sequences of Glyma.03g065800
>Glyma.03g065800.1 sequence-type=CDS polypeptide=Glyma.03g065800.1.p locus=Glyma.03g065800 ID=Glyma.03g065800.1.Wm82.a2.v1 annot-version=Wm82.a2.v1
ATGCAGCATTTGGACGAGGAAAAAATTATCAATGTTGTGAGTCCTGAAAAGGATGTGGATGGCTTTCATCCCTTAAATATTGGAAATCTTGCAATAAGAGGAAGAAAGCCCTTCTTTGTTCCTTGTGCTCCTAAGGGCTGCATTGAGTTGTTACTTAGTCACGGTGTGGAAATCAAGGGGAAAAGAGCAGTGATAATTGGAAGAAGTAAAATTGTGGGGTTACCCACTTCCTTGCTATTGCAGAGGCACCACGCAACAGTCAGCGTGTTACACGCGTATACGAAGAACCCAGAACATATAACTTCTGAAGCAGATATTGTGGTAGTAGTAGATGTTGGAGTCCCCAACATAGTTCGTGGCAATTGGCTAAAGAAAGGAGTTGTGGTGATTGACATGGGAACAAATCAAGTTAAGGTAATGATTTTTTTCTTCAGTATTTTAGTTGTGCCAATGACTTCTTAA
Predicted protein sequences of Glyma.03g065800
>Glyma.03g065800.1.p sequence-type=predicted peptide transcript=Glyma.03g065800.1 locus=Glyma.03g065800 ID=Glyma.03g065800.1.Wm82.a2.v1 annot-version=Wm82.a2.v1
MQHLDEEKIINVVSPEKDVDGFHPLNIGNLAIRGRKPFFVPCAPKGCIELLLSHGVEIKGKRAVIIGRSKIVGLPTSLLLQRHHATVSVLHAYTKNPEHITSEADIVVVVDVGVPNIVRGNWLKKGVVVIDMGTNQVKVMIFFFSILVVPMTS*






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