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Report for Sequence Feature Glyma.03g065500

Feature Type:gene_model
Chromosome:Gm03
Start:11450263
stop:11454605
Source:JGI
Version:Wm82.a2.v1
High confidence:yes



A previous version of this gene model can be found here:

Annotations for Glyma.03g065500
Database IDAnnotation TypeAnnotation DescriptionAnnotation SourceMatch ScoreEvidence Code
AT3G23730.1AT xyloglucan endotransglucosylase/hydrolase 16 JGI N/AIEA
GO:0005975GO-bp carbohydrate metabolic process EnsemblGenomesN/AIEA
GO:0005975GO-bp carbohydrate metabolic process JGI N/AIEA
GO:0004553GO-mf hydrolase activity, hydrolyzing O-glycosyl compounds EnsemblGenomesN/AIEA
GO:0004553GO-mf hydrolase activity, hydrolyzing O-glycosyl compounds JGI N/AIEA
PF00722PFAM Glycosyl hydrolases family 16 JGI N/AIEA
GN7V-43610SoyCyc9-rxn xyloglucan:xyloglucosyl transferase Plant Metabolic Network ISS

Proteins Associated with Glyma.03g065500
LocusGene SymbolProtein Name
SWEET50 sugar efflux transporter SWEET50

Expression Patterns of Glyma.03g065500
Gene expression representations made with eFP at the University of Toronto.
Waese et al. 2017, Plant Cell 29(8):1806-1821 ePlant: Visualizing and Exploring Multiple Levels of Data for Hypothesis Generation in Plant Biology

Glyma.03g065500 not represented in the dataset
Glyma.03g065500 not represented in the dataset
Libault et al. 2010, Plant Phys 152(2):541-552.
Complete Transcriptome of the Soybean Root Hair Cell, a Single-Cell Model, and Its Alteration in Response to Bradyrhizobium japonicum Infection 		Severin et al. 2010, BMC Plant Biology 10:160
RNA-Seq Atlas of Glycine max: A guide to the soybean transcriptome

To see more experiments click HERE

Related Legume Genes

View a gene family containing related genes from other legumes at LIS

Gene families from Phytozome are displayed using the PhyloTree viewer developed by LIS.


View gene and ortholog information at GlycineMine

Gene information in GlycineMine developed by LIS.


Related Plant Genes

View a gene family containing related genes from other plant species at PhyloGenes

Gene families from PhyloGenes.


Gene model name correspondences to Glyma.03g065500 Gene Call Version Wm82.a2.v1
Corresponding NameAnnotation VersionEvidenceComments
Glyma03g10046 Wm82.a1.v1.1IGC As supplied by JGI


Coding sequences of Glyma.03g065500
>Glyma.03g065500.1 sequence-type=CDS polypeptide=Glyma.03g065500.1.p locus=Glyma.03g065500 ID=Glyma.03g065500.1.Wm82.a2.v1 annot-version=Wm82.a2.v1
ATGGTTCGTGCACTCACGAATGGAGAAAGGGGTGGCCTTTGCGATCTGGTGGATTCGCTCAACTATGCTGCAAGTGTGGGATGCAAGGATTGTATTATGATAATTCCAACTTCCATTGTAACTGTGATGATCCAGGATCTCACCCACGGGTTTTTGATGACCCCCTTCGTGGGTAAGTCAACAGAGAAGCAATGTCCCATTGTAATGAGTCTTAAACGATGGGAGCGGAAGGAGTGTAAACCAAACAGTCTTCCTATCTTGCACAAAATGCAGGAGATGCGGTGCAAGTCATATCTGGACGAGAAAGGGGGTAAAGTTGGGGAGATTACTAAAATCTTCAAGCATGACAATAGTGTTATAGTGAAAGATTTAAATTTGAAGACAAAGCATGTCAAGAGTAGAGAAGAGGGTGAACTGGGGCAAATTATTAAGTTGTCATCCCAAGGGCCAACACATGATGAGATTGATTTCGAGTTTTTGCGAAACCTAAGTGGGGACCCTTATATTCTCCGCACAAACGTCTTCACCCAAGGCAAAGGTAATAGGGAGCAACAGTTCTATCTCTGGTTCGACCCCACCAGAAACTTCCACACTTATTCTATCATTTGGAAGCCCCAGCACATCATGATGCAGACCTACATTTTGGAAAATAAAGAAGCATGGATCTACGGAAGATTTCTCGAGCCTTCCTTACATTTGCACATTGCTTAA
Predicted protein sequences of Glyma.03g065500
>Glyma.03g065500.1.p sequence-type=predicted peptide transcript=Glyma.03g065500.1 locus=Glyma.03g065500 ID=Glyma.03g065500.1.Wm82.a2.v1 annot-version=Wm82.a2.v1
MVRALTNGERGGLCDLVDSLNYAASVGCKDCIMIIPTSIVTVMIQDLTHGFLMTPFVGKSTEKQCPIVMSLKRWERKECKPNSLPILHKMQEMRCKSYLDEKGGKVGEITKIFKHDNSVIVKDLNLKTKHVKSREEGELGQIIKLSSQGPTHDEIDFEFLRNLSGDPYILRTNVFTQGKGNREQQFYLWFDPTRNFHTYSIIWKPQHIMMQTYILENKEAWIYGRFLEPSLHLHIA*






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