SoyBase SoyBase transitions to NEW site on 10/1/2024
Integrating Genetics and Genomics to Advance Soybean Research

Report for Sequence Feature Glyma.03g063000

Feature Type:gene_model
Chromosome:Gm03
Start:9960457
stop:9965332
Source:JGI
Version:Wm82.a4.v1
High confidence:yes



Annotations for Glyma.03g063000
Database IDAnnotation TypeAnnotation DescriptionAnnotation SourceMatch ScoreEvidence Code
AT5G01260.2AT JGI N/AIEA
3.2.1.3EC glucan 1,4-alpha-glucosidase JGI N/AIEA
GO:0003824GO-mf catalytic activity JGI N/AIEA
GO:2001070GO-mf starch binding JGI N/AIEA
PTHR10357PantherFam ALPHA-AMYLASE FAMILY MEMBER JGI N/AIEA
PF00686Pfam Starch binding domain JGI N/AIEA

Gene model name correspondences to Glyma.03g063000 Gene Call Version Wm82.a4.v1
Corresponding NameAnnotation VersionEvidenceComments
Glyma03g08980 Wm82.a1.v1.1IGC As supplied by JGI


Coding sequences of Glyma.03g063000
>Glyma.03g063000.1 sequence-type=CDS polypeptide=Glyma.03g063000.1.p locus=Glyma.03g063000 id=Glyma.03g063000.1.Wm82.a4.v1 annot-version=Wm82.a4.v1
ATGATGAAAGCCCTCACAAGCTCTTGTTCTAAGGCCATGGTCGAGACTCTAGGACCCTTCTCTCCCAGAGTTCCCCTTTGTGTTTCTGATAGACCCGAATTCTGCTTCACCCTTCGTTCCAAAAATGAGAAAAAGGGATGGAATTTATTGCTCCTGAAACTGGTTCGAAACAATGATCTTTACCCTGTTCATGCAGTGCCACCAAAGGACCAGGTGGACTTGGAGACTGTGGAGCCTCAGGCTCAACAAAGTGAACAAACAAATGAATCAAAGTTTGTTCATGTATCGTTCCAGTTAGAAAAGAGTTGTAATTTTGGTGAACAGTTTCTTATAGTTGGAGGTGATCCTGTGCTTGGTTCATGGGACCCTTTAGAGGCATTACCCATGACATGGTCTGAAGGACATGTATGGGCTGTGGAGCTGGATATGCCTGCTGGACAAACATTCCAGTATAAGTTCATACTGGAAGGAGAAGGGGGGGATATTATTTGGCAGCCAGGGTCGGATCGATTGATCCACACTTGGGAAACTAAGAATAGAATAGTTGTTCTCGAAGATTGGGAGAATGTAGAACTTCAGAAAATAACAGAGGAAGATCAACTTGCCGAGCCAAATGAGGAACCCCAGGTTGACTTTGAAGTGCCAACTTTAGCTGAATTTCTTAATAATCCTCAAGAAGAACTGGATTCCAAAGCATCGGAAATATCGTCTGTAGAAGATACCCAAATTCAGTCTGTGGAGGAACCACTTGCTGAAACAGTTCGGCAACAAATCACTGAGGAAGATCAACTTGCCGAGCCAAATGAGGAACCCCAAGTTGACTTTGAAGTGCCAACTTTAGCTGAATTTCTTAATAATCCTCAAGAAGAACTGGATTCCAAAGCATTGGAAATATCATCTGTAGAAGATACCCAAATTCATGCTGTGGAGGAACCACTTGCTGAAACAGTCCGGCAACAAATCACTGGTAATAGTATTTCTTCCTCAATGGAAAAGCCAATGTCTATTGTTGTAGAAAACATCAGTTCTTCGGAGGATCTCATCAGCAGTATAAGCCACAAAAGTAATAAAAAGAGTATACTTCAACCAAGTGAAGAATCTGCAGATAGTCCAGGAAATGATGATATAATACATGATCTTGGTCAAAATGGAAATGCTGCATCACTGGAGAATCAGGAAAAGACAATTGTGGAAAGCAGCTTATTTGATCTTGAAGAAGGTCCTGTTCTTGTACCTGGCTTACCAATACCACCAACTGAGCCAACTGATGAAGCAGACCAAGGTGAAGTTCAAGAAACGACTAAAAAGGACACTTCAGTTGAAGCTTTTGAAACTCAGGATCAGAACATAGCTAAGTTCAGCAAGGAGGAAGAAACTGATGATGCCATACCCCAAGAGATAAATGCAACCATCAATAATGGACCAGAGCTGCTTTACAATAAACAACATGAAGAGTCTCATTTGTCCCCAGAAATGGAAGACTGGCCAAACTACGAGCCAGATGATGACAATACCGTGCAAAATGACATCAAATGGGGCCAAGACACGGTAAACAAGTTTCTAACAAAACTTGGATTCTTTTGA

>Glyma.03g063000.3 sequence-type=CDS polypeptide=Glyma.03g063000.3.p locus=Glyma.03g063000 id=Glyma.03g063000.3.Wm82.a4.v1 annot-version=Wm82.a4.v1
ATGATGAAAGCCCTCACAAGCTCTTGTTCTAAGGCCATGGTCGAGACTCTAGGACCCTTCTCTCCCAGAGTTCCCCTTTGTGTTTCTGATAGACCCGAATTCTGCTTCACCCTTCGTTCCAAAAATGAGAAAAAGGGATGGAATTTATTGCTCCTGAAACTGGTTCGAAACAATGATCTTTACCCTGTTCATGCAGTGCCACCAAAGGACCAGGTGGACTTGGAGACTGTGGAGCCTCAGGCTCAACAAAGTGAACAAACAAATGAATCAAAGTTTGTTCATGTATCGTTCCAGTTAGAAAAGAGTTGTAATTTTGGTGAACAGTTTCTTATAGTTGGAGGTGATCCTGTGCTTGGTTCATGGGACCCTTTAGAGGCATTACCCATGACATGGTCTGAAGGACATGTATGGGCTGTGGAGCTGGATATGCCTGCTGGACAAACATTCCAGTATAAGTTCATACTGGAAGGAGAAGGGGGGGATATTATTTGGCAGCCAGGGTCGGATCGATTGATCCACACTTGGGAAACTAAGAATAGAATAGTTGTTCTCGAAGATTGGGAGAATGTAGAACTTCAGAAAATAACAGAGGAAGATCAACTTGCCGAGCCAAATGAGGAACCCCAGGTTGACTTTGAAGTGCCAACTTTAGCTGAATTTCTTAATAATCCTCAAGAAGAACTGGATTCCAAAGCATCGGAAATATCGTCTGTAGAAGATACCCAAATTCAGTCTGTGGAGGAACCACTTGCTGAAACAGTTCGGCAACAAATCACTGAGGAAGATCAACTTGCCGAGCCAAATGAGGAACCCCAAGTTGACTTTGAAGTGCCAACTTTAGCTGAATTTCTTAATAATCCTCAAGAAGAACTGGATTCCAAAGCATTGGAAATATCATCTGTAGAAGATACCCAAATTCATGCTGTGGAGGAACCACTTGCTGAAACAGTCCGGCAACAAATCACTGGTAATAGTATTTCTTCCTCAATGGAAAAGCCAATGTCTATTGTTGTAGAAAACATCAGTTCTTCGGAGGATCTCATCAGCAGTATAAGCCACAAAAGTAATAAAAAGAGTATACTTCAACCAAGTGAAGAATCTGCAGATAGTCCAGGAAATGATGATATAATACATGATCTTGGTCAAAATGGAAATGCTGCATCACTGGAGAATCAGGAAAAGACAATTGTGGAAAGCAGCTTATTTGATCTTGAAGAAGGTCCTGTTCTTGTACCTGGCTTACCAATACCACCAACTGAGCCAACTGATGAAGCAGACCAAGGTGAAGTTCAAGAAACGACTAAAAAGGACACTTCAGTTGAAGCTTTTGAAACTCAGGATCAGAACATAGCTAAGGTAAACACTTGA
Predicted protein sequences of Glyma.03g063000
>Glyma.03g063000.1.p sequence-type=predicted peptide transcript=Glyma.03g063000.1 locus=Glyma.03g063000 id=Glyma.03g063000.1.p.Wm82.a4.v1 annot-version=Wm82.a4.v1
MMKALTSSCSKAMVETLGPFSPRVPLCVSDRPEFCFTLRSKNEKKGWNLLLLKLVRNNDLYPVHAVPPKDQVDLETVEPQAQQSEQTNESKFVHVSFQLEKSCNFGEQFLIVGGDPVLGSWDPLEALPMTWSEGHVWAVELDMPAGQTFQYKFILEGEGGDIIWQPGSDRLIHTWETKNRIVVLEDWENVELQKITEEDQLAEPNEEPQVDFEVPTLAEFLNNPQEELDSKASEISSVEDTQIQSVEEPLAETVRQQITEEDQLAEPNEEPQVDFEVPTLAEFLNNPQEELDSKALEISSVEDTQIHAVEEPLAETVRQQITGNSISSSMEKPMSIVVENISSSEDLISSISHKSNKKSILQPSEESADSPGNDDIIHDLGQNGNAASLENQEKTIVESSLFDLEEGPVLVPGLPIPPTEPTDEADQGEVQETTKKDTSVEAFETQDQNIAKFSKEEETDDAIPQEINATINNGPELLYNKQHEESHLSPEMEDWPNYEPDDDNTVQNDIKWGQDTVNKFLTKLGFF*

>Glyma.03g063000.3.p sequence-type=predicted peptide transcript=Glyma.03g063000.3 locus=Glyma.03g063000 id=Glyma.03g063000.3.p.Wm82.a4.v1 annot-version=Wm82.a4.v1
MMKALTSSCSKAMVETLGPFSPRVPLCVSDRPEFCFTLRSKNEKKGWNLLLLKLVRNNDLYPVHAVPPKDQVDLETVEPQAQQSEQTNESKFVHVSFQLEKSCNFGEQFLIVGGDPVLGSWDPLEALPMTWSEGHVWAVELDMPAGQTFQYKFILEGEGGDIIWQPGSDRLIHTWETKNRIVVLEDWENVELQKITEEDQLAEPNEEPQVDFEVPTLAEFLNNPQEELDSKASEISSVEDTQIQSVEEPLAETVRQQITEEDQLAEPNEEPQVDFEVPTLAEFLNNPQEELDSKALEISSVEDTQIHAVEEPLAETVRQQITGNSISSSMEKPMSIVVENISSSEDLISSISHKSNKKSILQPSEESADSPGNDDIIHDLGQNGNAASLENQEKTIVESSLFDLEEGPVLVPGLPIPPTEPTDEADQGEVQETTKKDTSVEAFETQDQNIAKVNT*






Funded by the USDA-ARS. Developed by the USDA-ARS SoyBase and Legume Clade Database group at the Iowa State University, Ames, IA
 
USDA Logo
Iowa State University Logo