Glyma.03g062500

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Report for Sequence Feature Glyma.03g062500

Feature Type:	gene_model
Chromosome:	Gm03
Start:	9653237
stop:	9657411
Source:	JGI
Version:	Wm82.a2.v1
High confidence:	yes

A previous version of this gene model can be found here:

Annotations for Glyma.03g062500

Database ID	Annotation Type	Annotation Description	Annotation Source	Match Score	Evidence Code
AT5G01260.2	AT	Carbohydrate-binding-like fold	JGI	N/A	IEA
GO:0030246	GO-mf	carbohydrate binding	EnsemblGenomes	N/A	IEA
GO:2001070	GO-mf	starch binding	EnsemblGenomes	N/A	IEA
GO:2001070	GO-mf	starch binding	JGI	N/A	IEA
PTHR10357	Panther	ALPHA-AMYLASE	JGI	N/A	IEA
PTHR10357:SF64	Panther		JGI	N/A	IEA
PF00686	PFAM	Starch binding domain	JGI	N/A	IEA
GN7V-65629	SoyCyc9-rxn	glucan 1,4-α-glucosidase	Plant Metabolic Network		ISS

Expression Patterns of Glyma.03g062500

Gene expression representations made with eFP at the University of Toronto.
Waese et al. 2017, Plant Cell 29(8):1806-1821 ePlant: Visualizing and Exploring Multiple Levels of Data for Hypothesis Generation in Plant Biology

Glyma.03g062500 not represented in the dataset	Glyma.03g062500 not represented in the dataset
Libault et al. 2010, Plant Phys 152(2):541-552. Complete Transcriptome of the Soybean Root Hair Cell, a Single-Cell Model, and Its Alteration in Response to Bradyrhizobium japonicum Infection	Severin et al. 2010, BMC Plant Biology 10:160 RNA-Seq Atlas of Glycine max: A guide to the soybean transcriptome

To see more experiments click HERE

Related Legume Genes

Gene families from Phytozome are displayed using the PhyloTree viewer developed by LIS.

Gene information in GlycineMine developed by LIS.

Related Plant Genes

Gene families from PhyloGenes.

Gene model name correspondences to Glyma.03g062500 Gene Call Version Wm82.a2.v1

Corresponding Name	Annotation Version	Evidence	Comments
Glyma03g08910	Wm82.a1.v1.1	IGC	As supplied by JGI

Transcripts of Glyma.03g062500

Limit To All Plant Sequences

>Glyma.03g062500.2 sequence-type=transcript locus=Glyma.03g062500 ID=Glyma.03g062500.2.Wm82.a2.v1 annot-version=Wm82.a2.v1
TCAACTACTAAAGCGATCGAAGAAGGGAACTAAAAACCAAACCAGTGTCTCACTCTCACCCCAGAAACTCATTGTTGTGTGGCACAACAAACTTCACCAATGATGAAAGCCCTCACAAGCTCTTGTTCTAAGGCCATGGTCGAGACTCTAGGACCCTTCTCTCCCAGAGTTCCCCTTTGTGTTTCTGATAGACCCAAATTCTGCTTCACCCTTCGTTCCAAAAATGAGAAAAAGGGATGGAATTTATTGCTCCTGAAACTAGTTCGAAACAATGATCTTTACCCTGTTCATGCAGTGCCACCAAAGGACCAGGTGGACTTGGAAACTGTGGAGCCTCAGGCTCAACAAAGTGAACAAACAAATGAATCAAAGTTTGTTCGTGTATCGTTCCAGTTACAAAAGACTTGTGATTTTGGTGAACAGTTTCTTATAGTTGGAGGTGATCCTGTGCTTGGTTCATGGGACCCTTTAGAGGCATTACCCATGACATGGTCTGAAGGACATGTATGGGCTGTGGAGCTGGATATGCCTGCTGGACAATCATTCCAGTATAAGTTCATACTGAAAGGAGAAGGGGGGGATATTATTTGGCAGCCAGGGTCGGATCGATTGATCCACACTTGGGAAACTATGAATAGAATAGTTGTTCTCGAAGATTGGGAGAATGTAGAACTTCAGAAAATTACAGAGGAAGATCAACTTGCCGAGCCAATTGAGGAACCCCAGGTTGACTTTGAAGTGCCAACTTTAGCTGAATTTCTTAATAATCCTCAAGAACTGGATTCCAAAGCATCGGAAATATCGTCTGTAGAAGATACCCAAATTCATGCTGTGGATGAACCACTTGCTGAAACAGTCGGGCAACAAATCACTGAATCTGCAGATAGTCCAGGAAATGATGATATAATACATGATCTTGGTCACAATGGAAATGCTGCATCACTGGAGAATCAGGAAAAGACAATTGTGGAAAGCAGCTTATTTGATCTTGAAGAAGGTCCTGTTCTTGTACCTGGCTTAACAATACCACCAACTGAGCCAACTGATGAAGCAGACCAAGGTGAAGTTCAAGAATCGACTAAAAAGGACATTTCAGTTGAAGCTTTTGAAACTCAGGATCAGAACATAGCTGAGTTCAGTAAGGAGGAAGAAACTGATGATGCCATACCCCAAGAGATAAATGCAACCATCAATAATGAACCAGAGTTGCTTTACAATAAACATGAAGAGTCTCATTTGTCCCCAGAAATGGAAGACGGCCAAACTACGAGCCAGATGATGACAATCCCTTGCAAAATGACATCAAATGGAGCCAAGACACGGTAAACAAGTTTCTAACAAAACTTGGATTCTTTTGATGGCAAACTTTAAAGAACCAAGGGAAGAAAACTTCATTGAAACTGGTCATGAGTTTTGTGATCATTCTGATCCATTTGCCAAAATTTTGATTTTCCTGGGAAATATGGCATGTTATGTGATGATGGTTGTTGAGTGTATGCTATGCTGCCATGTACTTAGATTGGTATCATTCTTTCAGTTTTGGCCACTTCTGTTAATCTGTATAGTACTGGGAGTTTCATGGGCGATAGATAGCGCTTTTGCTGTATATCATATCATAGTGATAGTGATCTTTTAAAAGCCATCTTAGAAGATTTATTCTTAACATTTCTCAGAAAAATAGAATTTTTCTGAGAAAATTAGTGTTACTTCATCTTGAATTCTCATAAAGTATG

>Glyma.03g062500.3 sequence-type=transcript locus=Glyma.03g062500 ID=Glyma.03g062500.3.Wm82.a2.v1 annot-version=Wm82.a2.v1
TCAACTACTAAAGCGATCGAAGAAGGGAACTAAAAACCAAACCAGTGTCTCACTCTCACCCCAGAAACTCATTGTTGTGTGGCACAACAAACTTCACCAATGATGAAAGCCCTCACAAGCTCTTGTTCTAAGGCCATGGTCGAGACTCTAGGACCCTTCTCTCCCAGAGTTCCCCTTTGTGTTTCTGATAGACCCAAATTCTGCTTCACCCTTCGTTCCAAAAATGAGAAAAAGGGATGGAATTTATTGCTCCTGAAACTAGTTCGAAACAATGATCTTTACCCTGTTCATGCAGTGCCACCAAAGGACCAGGTGGACTTGGAAACTGTGGAGCCTCAGGCTCAACAAAGTGAACAAACAAATGAATCAAAGTTTGTTCGTGTATCGTTCCAGTTACAAAAGACTTGTGATTTTGGTGAACAGTTTCTTATAGTTGGAGGTGATCCTGTGCTTGGTTCATGGGACCCTTTAGAGGCATTACCCATGACATGGTCTGAAGGACATGTATGGGCTGTGGAGCTGGATATGCCTGCTGGACAATCATTCCAGTATAAGTTCATACTGAAAGGAGAAGGGGGGGATATTATTTGGCAGCCAGGGTCGGATCGATTGATCCACACTTGGGAAACTATGAATAGAATAGTTGTTCTCGAAGATTGGGAGAATGTAGAACTTCAGAAAATTACAGAGGAAGATCAACTTGCCGAGCCAATTGAGGAACCCCAGGTTGACTTTGAAGTGCCAACTTTAGCTGAATTTCTTAATAATCCTCAAGAACTGGATTCCAAAGCATCGGAAATATCGTCTGTAGAAGATACCCAAATTCATGCTGTGGATGAACCACTTGCTGAAACAGTCGGGCAACAAATCACTGAATCTGCAGATAGTCCAGGAAATGATGATATAATACATGATCTTGGTCACAATGGAAATGCTGCATCACTGGAGAATCAGGAAAAGACAATTGTGGAAAGCAGCTTATTTGATCTTGAAGAAGGTCCTGTTCTTGTACCTGGCTTAACAATACCACCAACTGAGCCAACTGATGAAGCAGACCAAGGTGAAGTTCAAGAATCGACTAAAAAGGACATTTCAGTTGAAGCTTTTGAAACTCAGGATCAGAACATAGCTGAGTAAGGAGGAAGAAACTGATGATGCCATACCCCAAGAGATAAATGCAACCATCAATAATGAACCAGAGTTGCTTTACAATAAACATGAAGAGTCTCATTTGTCCCCAGAAATGGAAGACGGCCAAACTACGAGCCAGATGATGACAATCCCTTGCAAAATGACATCAAATGGAGCCAAGACACGGTAAACAAGTTTCTAACAAAACTTGGATTCTTTTGATGGCAAACTTTAAAGAACCAAGGGAAGAAAACTTCATTGAAACTGGTCATGAGTTTTGTGATCATTCTGATCCATTTGCCAAAATTTTGATTTTCCTGGGAAATATGGCATGTTATGTGATGATGGTTGTTGAGTGTATGCTATGCTGCCATGTACTTAGATTGGTATCATTCTTTCAGTTTTGGCCACTTCTGTTAATCTGTATAGTACTGGGAGTTTCATGGGCGATAGATAGCGCTTTTGCTGTATATCATATCATAGTGATAGTGATCTTTTAAAAGCCATCTTAGAAGATTTATTCTTAACATTTCTCAGAAAAATAGAATTTTTCTGAGAAAATTAGTGTTACTTCATCTTGAATTCTCATAAAGTATG

Coding sequences of Glyma.03g062500

Limit To All Plant Sequences

>Glyma.03g062500.1 sequence-type=CDS polypeptide=Glyma.03g062500.1.p locus=Glyma.03g062500 ID=Glyma.03g062500.1.Wm82.a2.v1 annot-version=Wm82.a2.v1
ATGATGAAAGCCCTCACAAGCTCTTGTTCTAAGGCCATGGTCGAGACTCTAGGACCCTTCTCTCCCAGAGTTCCCCTTTGTGTTTCTGATAGACCCAAATTCTGCTTCACCCTTCGTTCCAAAAATGAGAAAAAGGGATGGAATTTATTGCTCCTGAAACTAGTTCGAAACAATGATCTTTACCCTGTTCATGCAGTGCCACCAAAGGACCAGGTGGACTTGGAAACTGTGGAGCCTCAGGCTCAACAAAGTGAACAAACAAATGAATCAAAGTTTGTTCGTGTATCGTTCCAGTTACAAAAGACTTGTGATTTTGGTGAACAGTTTCTTATAGTTGGAGGTGATCCTGTGCTTGGTTCATGGGACCCTTTAGAGGCATTACCCATGACATGGTCTGAAGGACATGTATGGGCTGTGGAGCTGGATATGCCTGCTGGACAATCATTCCAGTATAAGTTCATACTGAAAGGAGAAGGGGGGGATATTATTTGGCAGCCAGGGTCGGATCGATTGATCCACACTTGGGAAACTATGAATAGAATAGTTGTTCTCGAAGATTGGGAGAATGTAGAACTTCAGAAAATTACAGAGGAAGATCAACTTGCCGAGCCAATTGAGGAACCCCAGGTTGACTTTGAAGTGCCAACTTTAGCTGAATTTCTTAATAATCCTCAAGAACTGGATTCCAAAGCATCGGAAATATCGTCTGTAGAAGATACCCAAATTCATGCTGTGGATGAACCACTTGCTGAAACAGTCGGGCAACAAATCACTGGTAATAGTATTTCTTCCTCAATGGTAATAGTATGTTCTATTGTTGTAGAAAACATAAGTTCTTCGGAGGATCTCATCAGCAGTATAAGCCACAAAAGTAATAAAAAGAGTATACTTCGACCTAGTGAAGAATCTGCAGATAGTCCAGGAAATGATGATATAATACATGATCTTGGTCACAATGGAAATGCTGCATCACTGGAGAATCAGGAAAAGACAATTGTGGAAAGCAGCTTATTTGATCTTGAAGAAGGTCCTGTTCTTGTACCTGGCTTAACAATACCACCAACTGAGCCAACTGATGAAGCAGACCAAGGTGAAGTTCAAGAATCGACTAAAAAGGACATTTCAGTTGAAGCTTTTGAAACTCAGGATCAGAACATAGCTGAGTTCAGTAAGGAGGAAGAAACTGATGATGCCATACCCCAAGAGATAAATGCAACCATCAATAATGAACCAGAGTTGCTTTACAATAAACATGAAGAGTCTCATTTGTCCCCAGAAATGGAAGACGGCCAAACTACGAGCCAGATGATGACAATCCCTTGCAAAATGACATCAAATGGAGCCAAGACACGGTAA

>Glyma.03g062500.2 sequence-type=CDS polypeptide=Glyma.03g062500.2.p locus=Glyma.03g062500 ID=Glyma.03g062500.2.Wm82.a2.v1 annot-version=Wm82.a2.v1
ATGATGAAAGCCCTCACAAGCTCTTGTTCTAAGGCCATGGTCGAGACTCTAGGACCCTTCTCTCCCAGAGTTCCCCTTTGTGTTTCTGATAGACCCAAATTCTGCTTCACCCTTCGTTCCAAAAATGAGAAAAAGGGATGGAATTTATTGCTCCTGAAACTAGTTCGAAACAATGATCTTTACCCTGTTCATGCAGTGCCACCAAAGGACCAGGTGGACTTGGAAACTGTGGAGCCTCAGGCTCAACAAAGTGAACAAACAAATGAATCAAAGTTTGTTCGTGTATCGTTCCAGTTACAAAAGACTTGTGATTTTGGTGAACAGTTTCTTATAGTTGGAGGTGATCCTGTGCTTGGTTCATGGGACCCTTTAGAGGCATTACCCATGACATGGTCTGAAGGACATGTATGGGCTGTGGAGCTGGATATGCCTGCTGGACAATCATTCCAGTATAAGTTCATACTGAAAGGAGAAGGGGGGGATATTATTTGGCAGCCAGGGTCGGATCGATTGATCCACACTTGGGAAACTATGAATAGAATAGTTGTTCTCGAAGATTGGGAGAATGTAGAACTTCAGAAAATTACAGAGGAAGATCAACTTGCCGAGCCAATTGAGGAACCCCAGGTTGACTTTGAAGTGCCAACTTTAGCTGAATTTCTTAATAATCCTCAAGAACTGGATTCCAAAGCATCGGAAATATCGTCTGTAGAAGATACCCAAATTCATGCTGTGGATGAACCACTTGCTGAAACAGTCGGGCAACAAATCACTGAATCTGCAGATAGTCCAGGAAATGATGATATAATACATGATCTTGGTCACAATGGAAATGCTGCATCACTGGAGAATCAGGAAAAGACAATTGTGGAAAGCAGCTTATTTGATCTTGAAGAAGGTCCTGTTCTTGTACCTGGCTTAACAATACCACCAACTGAGCCAACTGATGAAGCAGACCAAGGTGAAGTTCAAGAATCGACTAAAAAGGACATTTCAGTTGAAGCTTTTGAAACTCAGGATCAGAACATAGCTGAGTTCAGTAAGGAGGAAGAAACTGATGATGCCATACCCCAAGAGATAAATGCAACCATCAATAATGAACCAGAGTTGCTTTACAATAAACATGAAGAGTCTCATTTGTCCCCAGAAATGGAAGACGGCCAAACTACGAGCCAGATGATGACAATCCCTTGCAAAATGACATCAAATGGAGCCAAGACACGGTAA

>Glyma.03g062500.3 sequence-type=CDS polypeptide=Glyma.03g062500.3.p locus=Glyma.03g062500 ID=Glyma.03g062500.3.Wm82.a2.v1 annot-version=Wm82.a2.v1
ATGATGAAAGCCCTCACAAGCTCTTGTTCTAAGGCCATGGTCGAGACTCTAGGACCCTTCTCTCCCAGAGTTCCCCTTTGTGTTTCTGATAGACCCAAATTCTGCTTCACCCTTCGTTCCAAAAATGAGAAAAAGGGATGGAATTTATTGCTCCTGAAACTAGTTCGAAACAATGATCTTTACCCTGTTCATGCAGTGCCACCAAAGGACCAGGTGGACTTGGAAACTGTGGAGCCTCAGGCTCAACAAAGTGAACAAACAAATGAATCAAAGTTTGTTCGTGTATCGTTCCAGTTACAAAAGACTTGTGATTTTGGTGAACAGTTTCTTATAGTTGGAGGTGATCCTGTGCTTGGTTCATGGGACCCTTTAGAGGCATTACCCATGACATGGTCTGAAGGACATGTATGGGCTGTGGAGCTGGATATGCCTGCTGGACAATCATTCCAGTATAAGTTCATACTGAAAGGAGAAGGGGGGGATATTATTTGGCAGCCAGGGTCGGATCGATTGATCCACACTTGGGAAACTATGAATAGAATAGTTGTTCTCGAAGATTGGGAGAATGTAGAACTTCAGAAAATTACAGAGGAAGATCAACTTGCCGAGCCAATTGAGGAACCCCAGGTTGACTTTGAAGTGCCAACTTTAGCTGAATTTCTTAATAATCCTCAAGAACTGGATTCCAAAGCATCGGAAATATCGTCTGTAGAAGATACCCAAATTCATGCTGTGGATGAACCACTTGCTGAAACAGTCGGGCAACAAATCACTGAATCTGCAGATAGTCCAGGAAATGATGATATAATACATGATCTTGGTCACAATGGAAATGCTGCATCACTGGAGAATCAGGAAAAGACAATTGTGGAAAGCAGCTTATTTGATCTTGAAGAAGGTCCTGTTCTTGTACCTGGCTTAACAATACCACCAACTGAGCCAACTGATGAAGCAGACCAAGGTGAAGTTCAAGAATCGACTAAAAAGGACATTTCAGTTGAAGCTTTTGAAACTCAGGATCAGAACATAGCTGAGTAA

Predicted protein sequences of Glyma.03g062500

Limit To All Plant Sequences

>Glyma.03g062500.1.p sequence-type=predicted peptide transcript=Glyma.03g062500.1 locus=Glyma.03g062500 ID=Glyma.03g062500.1.Wm82.a2.v1 annot-version=Wm82.a2.v1
MMKALTSSCSKAMVETLGPFSPRVPLCVSDRPKFCFTLRSKNEKKGWNLLLLKLVRNNDLYPVHAVPPKDQVDLETVEPQAQQSEQTNESKFVRVSFQLQKTCDFGEQFLIVGGDPVLGSWDPLEALPMTWSEGHVWAVELDMPAGQSFQYKFILKGEGGDIIWQPGSDRLIHTWETMNRIVVLEDWENVELQKITEEDQLAEPIEEPQVDFEVPTLAEFLNNPQELDSKASEISSVEDTQIHAVDEPLAETVGQQITGNSISSSMVIVCSIVVENISSSEDLISSISHKSNKKSILRPSEESADSPGNDDIIHDLGHNGNAASLENQEKTIVESSLFDLEEGPVLVPGLTIPPTEPTDEADQGEVQESTKKDISVEAFETQDQNIAEFSKEEETDDAIPQEINATINNEPELLYNKHEESHLSPEMEDGQTTSQMMTIPCKMTSNGAKTR*

>Glyma.03g062500.2.p sequence-type=predicted peptide transcript=Glyma.03g062500.2 locus=Glyma.03g062500 ID=Glyma.03g062500.2.Wm82.a2.v1 annot-version=Wm82.a2.v1
MMKALTSSCSKAMVETLGPFSPRVPLCVSDRPKFCFTLRSKNEKKGWNLLLLKLVRNNDLYPVHAVPPKDQVDLETVEPQAQQSEQTNESKFVRVSFQLQKTCDFGEQFLIVGGDPVLGSWDPLEALPMTWSEGHVWAVELDMPAGQSFQYKFILKGEGGDIIWQPGSDRLIHTWETMNRIVVLEDWENVELQKITEEDQLAEPIEEPQVDFEVPTLAEFLNNPQELDSKASEISSVEDTQIHAVDEPLAETVGQQITESADSPGNDDIIHDLGHNGNAASLENQEKTIVESSLFDLEEGPVLVPGLTIPPTEPTDEADQGEVQESTKKDISVEAFETQDQNIAEFSKEEETDDAIPQEINATINNEPELLYNKHEESHLSPEMEDGQTTSQMMTIPCKMTSNGAKTR*

>Glyma.03g062500.3.p sequence-type=predicted peptide transcript=Glyma.03g062500.3 locus=Glyma.03g062500 ID=Glyma.03g062500.3.Wm82.a2.v1 annot-version=Wm82.a2.v1
MMKALTSSCSKAMVETLGPFSPRVPLCVSDRPKFCFTLRSKNEKKGWNLLLLKLVRNNDLYPVHAVPPKDQVDLETVEPQAQQSEQTNESKFVRVSFQLQKTCDFGEQFLIVGGDPVLGSWDPLEALPMTWSEGHVWAVELDMPAGQSFQYKFILKGEGGDIIWQPGSDRLIHTWETMNRIVVLEDWENVELQKITEEDQLAEPIEEPQVDFEVPTLAEFLNNPQELDSKASEISSVEDTQIHAVDEPLAETVGQQITESADSPGNDDIIHDLGHNGNAASLENQEKTIVESSLFDLEEGPVLVPGLTIPPTEPTDEADQGEVQESTKKDISVEAFETQDQNIAE*

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