SoyBase SoyBase transitions to NEW site on 10/1/2024
Integrating Genetics and Genomics to Advance Soybean Research

Report for Sequence Feature Glyma.03g060100

Feature Type:gene_model
Chromosome:Gm03
Start:8792959
stop:8797411
Source:JGI
Version:Wm82.a4.v1
High confidence:yes



Annotations for Glyma.03g060100
Database IDAnnotation TypeAnnotation DescriptionAnnotation SourceMatch ScoreEvidence Code
AT5G60540.1AT ATPDX2,EMB2407,PDX2 JGI N/AIEA
4.3.3.6EC pyridoxal 5'-phosphate synthase (glutamine hydrolysing) JGI N/AIEA
GO:0009236GO-bp cobalamin biosynthetic process JGI N/AIEA
GO:0003824GO-mf catalytic activity JGI N/AIEA
K08681KEGG Vitamin B6 metabolism JGI N/AIEA
KOG3210 KOG Imidazoleglycerol-phosphate synthase subunit H-like JGI N/AIEA
PTHR31559PantherFam PYRIDOXAL 5'-PHOSPHATE SYNTHASE SUBUNIT SNO JGI N/AIEA
PTHR31559:SF0PantherFam PYRIDOXAL 5'-PHOSPHATE SYNTHASE SUBUNIT SNO1-RELATED JGI N/AIEA
PF07685Pfam CobB/CobQ-like glutamine amidotransferase domain JGI N/AIEA

Gene model name correspondences to Glyma.03g060100 Gene Call Version Wm82.a4.v1
Corresponding NameAnnotation VersionEvidenceComments
Glyma03g08260 Wm82.a1.v1.1IGC As supplied by JGI


Coding sequences of Glyma.03g060100
>Glyma.03g060100.1 sequence-type=CDS polypeptide=Glyma.03g060100.1.p locus=Glyma.03g060100 id=Glyma.03g060100.1.Wm82.a4.v1 annot-version=Wm82.a4.v1
ATGGCCGTCGTTGGCGTCCTCGCGCTGCAAGGATCTTTCAACGAACACATAGCTGCTCTTAGAAGGTTAGGGGTGCAAGGCGTGGAGATTCGAAAGCCAGAGCAGCTTAACACAATTAGTTCCCTCATTATCCCTGGTGGAGAAAGCACCACCATGGCTAAGCTCGCCGAGTATCACAACCTGTTTCCTGCTTTGCGAGAGTTTGTACAAATGGGAAAGCCTGTTTGGGGAACCTGTGCAGGGCTTATATTCTTGGCAAATAAAGCTATAGGACAGAAGACTGGTGGTCAATATTTGGTTGGTGGACTTGATTGTACAGTGCATAGAAATTTCTTTGGCAGCCAGATTCAAAGCTTTGAGGCAGAGCTTTCAGTGCCGGAGCTTGTCTCCAAGGAAGGAGGTCCTGAAACATTTTGTGGAATTTTTATTCGTGCCCCTGCAATTCTTGAAGCAGGGCCAGAAGTTCAAGTGCTGGCTGATTATCCTGTACCTTCTAGCAGATTGTTGAGTTCTGATTCCTCTATTGAAGACCAAACGGAGAATGCTGAGAAAGAAAGTAAAGTTATAGTTGCTGTGAGACAAGGGAACATATTAGCCACTGCTTTCCATCCTGAATTGACAGCCGATACTCGATGGCATAGTTATTTCGTAAAAATGTCAAATGAAATTAGAGAAGAGGCCTCTTCGAGTAGCCTTGTTCCTGCACAAGTCAGTAGTACAAGTCAATATCAACAGCCCCGGAATGACCTTCCTATCTATCGATAG
Predicted protein sequences of Glyma.03g060100
>Glyma.03g060100.1.p sequence-type=predicted peptide transcript=Glyma.03g060100.1 locus=Glyma.03g060100 id=Glyma.03g060100.1.p.Wm82.a4.v1 annot-version=Wm82.a4.v1
MAVVGVLALQGSFNEHIAALRRLGVQGVEIRKPEQLNTISSLIIPGGESTTMAKLAEYHNLFPALREFVQMGKPVWGTCAGLIFLANKAIGQKTGGQYLVGGLDCTVHRNFFGSQIQSFEAELSVPELVSKEGGPETFCGIFIRAPAILEAGPEVQVLADYPVPSSRLLSSDSSIEDQTENAEKESKVIVAVRQGNILATAFHPELTADTRWHSYFVKMSNEIREEASSSSLVPAQVSSTSQYQQPRNDLPIYR*






Funded by the USDA-ARS. Developed by the USDA-ARS SoyBase and Legume Clade Database group at the Iowa State University, Ames, IA
 
USDA Logo
Iowa State University Logo