SoyBase SoyBase transitions to NEW site on 10/1/2024
Integrating Genetics and Genomics to Advance Soybean Research

Report for Sequence Feature Glyma.03g057300

Feature Type:gene_model
Chromosome:Gm03
Start:8114945
stop:8118490
Source:JGI
Version:Wm82.a4.v1
High confidence:yes



Annotations for Glyma.03g057300
Database IDAnnotation TypeAnnotation DescriptionAnnotation SourceMatch ScoreEvidence Code
AT5G05610.2AT AL1 JGI N/AIEA
GO:0006355GO-bp regulation of transcription, DNA-templated JGI N/AIEA
GO:0005515GO-mf protein binding JGI N/AIEA
GO:0042393GO-mf histone binding JGI N/AIEA
KOG1632 KOG Uncharacterized PHD Zn-finger protein JGI N/AIEA
PTHR12321PantherFam CPG BINDING PROTEIN JGI N/AIEA
PF00628Pfam PHD-finger JGI N/AIEA
PF12165Pfam Alfin JGI N/AIEA

Gene model name correspondences to Glyma.03g057300 Gene Call Version Wm82.a4.v1
Corresponding NameAnnotation VersionEvidenceComments
Glyma03g07750 Wm82.a1.v1.1IGC As supplied by JGI


Coding sequences of Glyma.03g057300
>Glyma.03g057300.1 sequence-type=CDS polypeptide=Glyma.03g057300.1.p locus=Glyma.03g057300 id=Glyma.03g057300.1.Wm82.a4.v1 annot-version=Wm82.a4.v1
ATGGAAATGGCTTCCACTCCCCGCACCGTCGAAGAGATCTTCAAGGACTACACCGCCCGCAGAACCGCCATCGTTCGCGCTCTCTCTCAAGATGTGGATGAATTCTACGGACTCTGCGATCCAGATAAGGAGAACTTGTGCCTCTATGGACATCCGAATGAAACATGGGAGGTGACTTTGCCGGCAGAGGAAGTTCCTCCGGAGCTTCCGGAGCCTGCACTCGGAATCAATTTTGCTAGGGATGGCATGAACCGCAGGGACTGGCTTTCTCTGGTTGCTGTGCACAGTGATTCGTGGTTGCTCTCTGTGGCCTTCTATCTTGGAGCTCGTCTTAACCGCAACGAAAGGAAACGTTTATTTAGCTTGATCAATGATCTTCCTACTGTTTTTGAAGTTGTGACTGAGAGGAAGCCAGTAAAGGACAAGCCCACTGCAGACAGTGGAAGCAAGTCTAGAGGCAGCACCAAGAGATCAAGTGATGGGCAAGTTAAGAGCAACCCAAAGTTTGCAGATGATGGTTATGAAGACGAGGATGATGAGCACAGTGAAACCCTTTGTGGGAGCTGTGGCGGAAATTACAATGCAGATGAATTTTGGATTGGCTGCGATATATGTGAGAGGTGGTTCCATGGGAAATGTGTGAAGATCACTCCTGCAAAAGCTGAGAGCATAAAGCAATACAAATGTCCATCATGCAGCTTGAGGCGAGGCAGGCCCTAA
Predicted protein sequences of Glyma.03g057300
>Glyma.03g057300.1.p sequence-type=predicted peptide transcript=Glyma.03g057300.1 locus=Glyma.03g057300 id=Glyma.03g057300.1.p.Wm82.a4.v1 annot-version=Wm82.a4.v1
MEMASTPRTVEEIFKDYTARRTAIVRALSQDVDEFYGLCDPDKENLCLYGHPNETWEVTLPAEEVPPELPEPALGINFARDGMNRRDWLSLVAVHSDSWLLSVAFYLGARLNRNERKRLFSLINDLPTVFEVVTERKPVKDKPTADSGSKSRGSTKRSSDGQVKSNPKFADDGYEDEDDEHSETLCGSCGGNYNADEFWIGCDICERWFHGKCVKITPAKAESIKQYKCPSCSLRRGRP*






Funded by the USDA-ARS. Developed by the USDA-ARS SoyBase and Legume Clade Database group at the Iowa State University, Ames, IA
 
USDA Logo
Iowa State University Logo