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Report for Sequence Feature Glyma.03g056700

Feature Type:gene_model
Chromosome:Gm03
Start:7844599
stop:7848041
Source:JGI
Version:Wm82.a4.v1
High confidence:yes



Annotations for Glyma.03g056700
Database IDAnnotation TypeAnnotation DescriptionAnnotation SourceMatch ScoreEvidence Code
AT5G05580.1AT FAD8 JGI N/AIEA
1.14.99.33EC JGI N/AIEA
GO:0006629GO-bp lipid metabolic process JGI N/AIEA
GO:0055114GO-bp obsolete oxidation-reduction process JGI N/AIEA
GO:0016717GO-mf oxidoreductase activity, acting on paired donors, with oxidation of a pair of donors resulting in the reduction of molecular oxygen to two molecules of water JGI N/AIEA
K10257KEGG Lipid biosynthesis proteins JGI N/AIEA
PTHR32100PantherFam OMEGA-6 FATTY ACID DESATURASE, CHLOROPLASTIC JGI N/AIEA
PF00487Pfam Fatty acid desaturase JGI N/AIEA
PF11960Pfam Domain of unknown function (DUF3474) JGI N/AIEA

Proteins Associated with Glyma.03g056700
LocusGene SymbolProtein Name
FAD8-2 omega-3 fatty acid desaturase, chloroplastic-like
FAD8.2 omega-3 fatty acid desaturase, chloroplastic

Gene model name correspondences to Glyma.03g056700 Gene Call Version Wm82.a4.v1
Corresponding NameAnnotation VersionEvidenceComments
Glyma03g07570 Wm82.a1.v1.1IGC As supplied by JGI


Coding sequences of Glyma.03g056700
>Glyma.03g056700.1 sequence-type=CDS polypeptide=Glyma.03g056700.1.p locus=Glyma.03g056700 id=Glyma.03g056700.1.Wm82.a4.v1 annot-version=Wm82.a4.v1
ATGGCAACCTGGGTTTTATCAGAATGTGGCTTAAGGCCTCTTCCACCAGTGTTTCCACGGTCAACAAGACCCATTTCGTGCCAAAAACCTTCAAAGTCTAGATTTTTAAGCACAAACAAGGGTGTGCCAGATCTGAATCTCCAAGCAAGAGGGTTAACATGCTGTAGTTTTAGGGATAGAAAGTGGGAATTGGGAGTGAGTGCTCCACTGAAATTTGCCACCAATGAGGGAGAGGAAGAAGAGAGAACCAATGGGGCTAATAATGGGGTTGGTGAGGAAGTTTCAGAATTTGACCCTAGTGCACCACCACCCTTCAAATTGGCAGATATTAGAGCTGCCATTCCTAAACACTGTTGGGTGAAGGACCCTTGGAAGTCCATGAGTTATGTTGTTAGAGATGTCATTGTGGTTTTTGGGTTGGCTGCTGCTGCAGCTTATCTCAACAATTGGGTTGTTTGGCCTCTCTATTGGGCTGCTCAGGGAACCATGTTCTGGGCCCTCTTTGTTCTTGGTCATGATTGTGGTCATGGAAGCTTTTCAAACAATCCCAAGTTGAACAGTGTTGCTGGCCACTTGCTGCATTCATCAATTCTAGTACCTTATCATGGATGGAGAATCAGTCATAGAACACATCATCAAAACCATGGCCATGTCGAAAATGATGAATCTTGGCACCCATTGCCAGAGAAAATTTTCAAGAGCTTGGATAATGTAACACGCATTTTAAGATTTACTCTACCTTTCCCATTGCTTGCATATCCTATCTACCTGTGGAGCAGGAGTCCCGGGAAGACTGGTTCTCACTTTAATCCAGACAGTGACTTGTTTGTTCCCAGTGAGAGAAAAGATGTTATTACTTCAACAATTTGTTGGACAGCTATGGCTGCTTTGCTTGTTGGTCTGGGATTTGTGATGGGTCCAGTTCAATTGCTTAAGCTTTATGGCATTCCCTATGCGATTTTTGTTATGTGGTTGGATTTGGTGACTTATTTGCATCACCATGGCCATGAAGACAAATTACCTTGGTATCGTGGAGAGGAATGGAGCTACCTTAGGGGTGGCCTTACAACTATTGATCGTGACTACGGATGGATCAATAACATCCACCACGACATTGGAACCCATGTCATTCATCACCTCTTTCCTCAAATACCACACTATCACTTAATAGAAGCAACTGAAGCAGCTAAGCCAGTTCTTGGTCAATACTACCGCGAACCAAAGAAGTCTAGTCCTCTTCCAATTTACCTCATTGGAGAATTGTTAAGAAGCATGAAGAAAGACCATTTTGTCAGTGACAGTGGCGATATTGTATACTATCAAACAGACCCTACACTTAGTAGCTCTTCCACATCACAGTAA
Predicted protein sequences of Glyma.03g056700
>Glyma.03g056700.1.p sequence-type=predicted peptide transcript=Glyma.03g056700.1 locus=Glyma.03g056700 id=Glyma.03g056700.1.p.Wm82.a4.v1 annot-version=Wm82.a4.v1
MATWVLSECGLRPLPPVFPRSTRPISCQKPSKSRFLSTNKGVPDLNLQARGLTCCSFRDRKWELGVSAPLKFATNEGEEEERTNGANNGVGEEVSEFDPSAPPPFKLADIRAAIPKHCWVKDPWKSMSYVVRDVIVVFGLAAAAAYLNNWVVWPLYWAAQGTMFWALFVLGHDCGHGSFSNNPKLNSVAGHLLHSSILVPYHGWRISHRTHHQNHGHVENDESWHPLPEKIFKSLDNVTRILRFTLPFPLLAYPIYLWSRSPGKTGSHFNPDSDLFVPSERKDVITSTICWTAMAALLVGLGFVMGPVQLLKLYGIPYAIFVMWLDLVTYLHHHGHEDKLPWYRGEEWSYLRGGLTTIDRDYGWINNIHHDIGTHVIHHLFPQIPHYHLIEATEAAKPVLGQYYREPKKSSPLPIYLIGELLRSMKKDHFVSDSGDIVYYQTDPTLSSSSTSQ*






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