SoyBase SoyBase transitions to NEW site on 10/1/2024
Integrating Genetics and Genomics to Advance Soybean Research

Report for Sequence Feature Glyma.03g042500

Feature Type:gene_model
Chromosome:Gm03
Start:5457540
stop:5460682
Source:JGI
Version:Wm82.a4.v1
High confidence:yes



Annotations for Glyma.03g042500
Database IDAnnotation TypeAnnotation DescriptionAnnotation SourceMatch ScoreEvidence Code
AT2G38460.1AT ATIREG1,FPN1,IREG1 JGI N/AIEA
GO:0034755GO-bp iron ion transmembrane transport JGI N/AIEA
GO:0016021GO-cc integral component of membrane JGI N/AIEA
GO:0005381GO-mf iron ion transmembrane transporter activity JGI N/AIEA
K14685KEGG Transporters JGI N/AIEA
PTHR11660PantherFam SOLUTE CARRIER FAMILY 40 MEMBER JGI N/AIEA
PTHR11660:SF57PantherFam SOLUTE CARRIER FAMILY 40 PROTEIN JGI N/AIEA
PF06963Pfam Ferroportin1 (FPN1) JGI N/AIEA

Gene model name correspondences to Glyma.03g042500 Gene Call Version Wm82.a4.v1
Corresponding NameAnnotation VersionEvidenceComments
Glyma03g05201 Wm82.a1.v1.1IGC As supplied by JGI


Coding sequences of Glyma.03g042500
>Glyma.03g042500.1 sequence-type=CDS polypeptide=Glyma.03g042500.1.p locus=Glyma.03g042500 id=Glyma.03g042500.1.Wm82.a4.v1 annot-version=Wm82.a4.v1
ATGACAGCTACCTTAAAATGGGAAGGAATACCTGCATATGTTATTGGAATAGCAAGAGGAATAAGTGTTGTGATTGGAATAGCTGCAACAGCTGTATATCCTGTGCTACAGTCTCATATATCGACCATTAGAACTGGACTTTGGTCTATATGGTCTCAGTGGAGTTGCCTCCTTCCATGTGTGGCTGCAATATGGATCCAAAGTGGCTTTCTATCATCATATATTCTGATGGGAAGTGTAGCCATTTCTCGGCTTGGATTGTGGATGTTTCATTTGTCTGTGCTTCAACAAATGCAGGATCTTGTTTCTGAATCCGATCGTTTGATTGTTGGAGGCGTTCAAAGTTCGCTTCAGTCTTTGATGGGTTTATTGGCCTATGTAATGGGAATCATAATATCTGATCCACGGGACTTCTGGAAGTTGACTTCAATATCTTCTAGCAGTCACATTAGCTGCATTCCTCTACTGTATCCACGCATACCATGTACGAAAGCACCTCTGCCACTTAGACCAAGTATTGTGGGGTAA

>Glyma.03g042500.2 sequence-type=CDS polypeptide=Glyma.03g042500.2.p locus=Glyma.03g042500 id=Glyma.03g042500.2.Wm82.a4.v1 annot-version=Wm82.a4.v1
ATGACAGCTACCTTAAAATGGGAAGGAATACCTGCATATGTTATTGGAATAGCAAGAGGAATAAGTGTTGTGATTGGAATAGCTGCAACAGCTGTATATCCTGTGCTACAGTCTCATATATCGACCATTAGAACTGGACTTTGGTCTATATGGTCTCAGTGGAGTTGCCTCCTTCCATGTGTGGCTGCAATATGGATCCAAAGTGGCTTTCTATCATCATATATTCTGATGGGAAGTGTAGCCATTTCTCGGCTTGGATTGTGGATGTTTCATTTGTCTGTGCTTCAACAAATGCAGGATCTTGTTTCTGAATCCGATCGTTTGATTGTTGGAGGCGTTCAAAGTTCGCTTCAGTCTTTGATGGGTTTATTGGCCTATGTAATGGGAATCATAATATCTGATCCACGGGACTTCTGGAAGTTGACTTCAATATCTTCTAGCAGTCACATTAGCTGCATTCCTCTACTGTATCCACGCATACCATGTACGAAAGCACCTCTGCCACTTAGACCAAGTATTGTGGGGTAA

>Glyma.03g042500.3 sequence-type=CDS polypeptide=Glyma.03g042500.3.p locus=Glyma.03g042500 id=Glyma.03g042500.3.Wm82.a4.v1 annot-version=Wm82.a4.v1
ATGACAGCTACCTTAAAATGGGAAGGAATACCTGCATATGTTATTGGAATAGCAAGAGGAATAAGTGTTGTGATTGGAATAGCTGCAACAGCTGTATATCCTGTGCTACAGTCTCATATATCGACCATTAGAACTGGACTTTGGTCTATATGGTCTCAGTGGAGTTGCCTCCTTCCATGTGTGGCTGCAATATGGATCCAAAGTGGCTTTCTATCATCATATATTCTGATGGGAAGTGTAGCCATTTCTCGGCTTGGATTGTGGATGTTTCATTTGTCTGTGCTTCAACAAATGCAGGATCTTGTTTCTGAATCCGATCGTTTGATTGTTGGAGGCGTTCAAAGTTCGCTTCAGTCTTTGATGGGTTTATTGGCCTATGTAATGGGAATCATAATATCTGATCCACGGGACTTCTGGAAGTTGACTTCAATATCTTCTAGCAGTCACATTAGCTGCATTCCTCTACTGTATCCACGCATACCATGTACGAAAGCACCTCTGCCACTTAGACCAAGTATTGTGGGGTAA
Predicted protein sequences of Glyma.03g042500
>Glyma.03g042500.1.p sequence-type=predicted peptide transcript=Glyma.03g042500.1 locus=Glyma.03g042500 id=Glyma.03g042500.1.p.Wm82.a4.v1 annot-version=Wm82.a4.v1
MTATLKWEGIPAYVIGIARGISVVIGIAATAVYPVLQSHISTIRTGLWSIWSQWSCLLPCVAAIWIQSGFLSSYILMGSVAISRLGLWMFHLSVLQQMQDLVSESDRLIVGGVQSSLQSLMGLLAYVMGIIISDPRDFWKLTSISSSSHISCIPLLYPRIPCTKAPLPLRPSIVG*

>Glyma.03g042500.2.p sequence-type=predicted peptide transcript=Glyma.03g042500.2 locus=Glyma.03g042500 id=Glyma.03g042500.2.p.Wm82.a4.v1 annot-version=Wm82.a4.v1
MTATLKWEGIPAYVIGIARGISVVIGIAATAVYPVLQSHISTIRTGLWSIWSQWSCLLPCVAAIWIQSGFLSSYILMGSVAISRLGLWMFHLSVLQQMQDLVSESDRLIVGGVQSSLQSLMGLLAYVMGIIISDPRDFWKLTSISSSSHISCIPLLYPRIPCTKAPLPLRPSIVG*

>Glyma.03g042500.3.p sequence-type=predicted peptide transcript=Glyma.03g042500.3 locus=Glyma.03g042500 id=Glyma.03g042500.3.p.Wm82.a4.v1 annot-version=Wm82.a4.v1
MTATLKWEGIPAYVIGIARGISVVIGIAATAVYPVLQSHISTIRTGLWSIWSQWSCLLPCVAAIWIQSGFLSSYILMGSVAISRLGLWMFHLSVLQQMQDLVSESDRLIVGGVQSSLQSLMGLLAYVMGIIISDPRDFWKLTSISSSSHISCIPLLYPRIPCTKAPLPLRPSIVG*






Funded by the USDA-ARS. Developed by the USDA-ARS SoyBase and Legume Clade Database group at the Iowa State University, Ames, IA
 
USDA Logo
Iowa State University Logo