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Report for Sequence Feature Glyma.03g017200

Feature Type:gene_model
Chromosome:Gm03
Start:1723170
stop:1726862
Source:JGI
Version:Wm82.a4.v1
High confidence:yes



Annotations for Glyma.03g017200
Database IDAnnotation TypeAnnotation DescriptionAnnotation SourceMatch ScoreEvidence Code
AT5G52040.2AT ATRSP41 JGI N/AIEA
GO:0003676GO-mf nucleic acid binding JGI N/AIEA
K12893KEGG Spliceosome JGI N/AIEA
KOG0106 KOG Alternative splicing factor SRp55/B52/SRp75 (RRM superfamily) JGI N/AIEA
PTHR24012PantherFam RNA BINDING PROTEIN JGI N/AIEA
PF00076Pfam RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain) JGI N/AIEA

Gene model name correspondences to Glyma.03g017200 Gene Call Version Wm82.a4.v1
Corresponding NameAnnotation VersionEvidenceComments
Glyma03g01920 Wm82.a1.v1.1IGC As supplied by JGI


Coding sequences of Glyma.03g017200
>Glyma.03g017200.1 sequence-type=CDS polypeptide=Glyma.03g017200.1.p locus=Glyma.03g017200 id=Glyma.03g017200.1.Wm82.a4.v1 annot-version=Wm82.a4.v1
ATGAAACCTGTTTTCTGCGGAAACCTGGATTTCGACGCGCGTCAATCCGACGTGGAGAGGCTCTTCAGAAGATACGGCAAGGTTGATAGAGTCGACATGAAATCCGGGTTTGCTTTCGTCTACATGGAAGATGAACGTGATGCTGAGTATGCAATCAGAAGGCTTGATAGAACAGAATTTGGTAGAAAGGGTCGCCGGATTCGTGTTGAGTGGACTAAGCAAGAACGTGACAGTAGAAGGTCAGGTGGTGATTCCAGAAAATCTTCATCTAATTCAAGACCATCCAAAACTTTGTTTGTTATAAATTTTGATCCCGTTAATGCCAGGACAAGGGATCTGGAGAGACATTTTGATTCCTATGGGAAAATATTAAATATAAGAATCAGAAGGAATTTTGCTTTTATTCAGTTTGAATCCCAGGAGGATGCTACTAGAGCTTTGGAGGCGACCAACCTGAGCAAGTTTATGGACCGTGTTATCACTGTGGAGTATGCCATAAGAGATGATGATGACAGAGACAGAAGGAATGGATACAGTCCTGATAGAAGAGGCCATGACTCTCCTGATGGGAGATATGGTCGTGGTAGATCCCCCAGTCCATATCGTAGAGGTAGGGGTAGCCCAGATTATGGTCATGGATCGAATCCATCTTCCAGACCAGAACCAAGAGGAAGCCCCAAGTATGATCGAGCTGAAAGCCCAATAAATGGGAGATATGATAGCCGGTCTCCCCCACCCCGAGATAGGTCTCGATCTTGA

>Glyma.03g017200.2 sequence-type=CDS polypeptide=Glyma.03g017200.2.p locus=Glyma.03g017200 id=Glyma.03g017200.2.Wm82.a4.v1 annot-version=Wm82.a4.v1
ATGACTTTTGCTCAGTGTTCAATTTCCAACATGTTTCAACATAGAAACCATGATGATTTCGCAACTGTGGCAGGGTTTGCTTTCGTCTACATGGAAGATGAACGTGATGCTGAGTATGCAATCAGAAGGCTTGATAGAACAGAATTTGGTAGAAAGGGTCGCCGGATTCGTGTTGAGTGGACTAAGCAAGAACGTGACAGTAGAAGGTCAGGTGGTGATTCCAGAAAATCTTCATCTAATTCAAGACCATCCAAAACTTTGTTTGTTATAAATTTTGATCCCGTTAATGCCAGGACAAGGGATCTGGAGAGACATTTTGATTCCTATGGGAAAATATTAAATATAAGAATCAGAAGGAATTTTGCTTTTATTCAGTTTGAATCCCAGGAGGATGCTACTAGAGCTTTGGAGGCGACCAACCTGAGCAAGTTTATGGACCGTGTTATCACTGTGGAGTATGCCATAAGAGATGATGATGACAGAGACAGAAGGAATGGATACAGTCCTGATAGAAGAGGCCATGACTCTCCTGATGGGAGATATGGTCGTGGTAGATCCCCCAGTCCATATCGTAGAGGTAGGGGTAGCCCAGATTATGGTCATGGATCGAATCCATCTTCCAGACCAGAACCAAGAGGAAGCCCCAAGTATGATCGAGCTGAAAGCCCAATAAATGGGAGATATGATAGCCGGTCTCCCCCACCCCGAGATAGGTCTCGATCTTGA

>Glyma.03g017200.3 sequence-type=CDS polypeptide=Glyma.03g017200.3.p locus=Glyma.03g017200 id=Glyma.03g017200.3.Wm82.a4.v1 annot-version=Wm82.a4.v1
ATGACTTTTGCTCAGTGTTCAATTTCCAACATGTTTCAACATAGAAACCATGATGATTTCGCAACTGTGGCAGGGTTTGCTTTCGTCTACATGGAAGATGAACGTGATGCTGAGTATGCAATCAGAAGGCTTGATAGAACAGAATTTGGTAGAAAGGGTCGCCGGATTCGTGTTGAGTGGACTAAGCAAGAACGTGACAGTAGAAGGTCAGGTGGTGATTCCAGAAAATCTTCATCTAATTCAAGACCATCCAAAACTTTGTTTGTTATAAATTTTGATCCCGTTAATGCCAGGACAAGGGATCTGGAGAGACATTTTGATTCCTATGGGAAAATATTAAATATAAGAATCAGAAGGAATTTTGCTTTTATTCAGTTTGAATCCCAGGAGGATGCTACTAGAGCTTTGGAGGCGACCAACCTGAGCAAGTTTATGGACCGTGTTATCACTGTGGAGTATGCCATAAGAGATGATGATGACAGAGACAGAAGGAATGGATACAGTCCTGATAGAAGAGGCCATGACTCTCCTGATGGGAGATATGGTCGTGGTAGATCCCCCAGTCCATATCGTAGAGGTAGGGGTAGCCCAGATTATGGTCATGGATCGAATCCATCTTCCAGACCAGAACCAAGAGGAAGCCCCAAGTATGATCGAGCTGAAAGCCCAATAAATGGGAGATATGATAGCCGGTCTCCCCCACCCCGAGATAGGTCTCGATCTTGA
Predicted protein sequences of Glyma.03g017200
>Glyma.03g017200.1.p sequence-type=predicted peptide transcript=Glyma.03g017200.1 locus=Glyma.03g017200 id=Glyma.03g017200.1.p.Wm82.a4.v1 annot-version=Wm82.a4.v1
MKPVFCGNLDFDARQSDVERLFRRYGKVDRVDMKSGFAFVYMEDERDAEYAIRRLDRTEFGRKGRRIRVEWTKQERDSRRSGGDSRKSSSNSRPSKTLFVINFDPVNARTRDLERHFDSYGKILNIRIRRNFAFIQFESQEDATRALEATNLSKFMDRVITVEYAIRDDDDRDRRNGYSPDRRGHDSPDGRYGRGRSPSPYRRGRGSPDYGHGSNPSSRPEPRGSPKYDRAESPINGRYDSRSPPPRDRSRS*

>Glyma.03g017200.2.p sequence-type=predicted peptide transcript=Glyma.03g017200.2 locus=Glyma.03g017200 id=Glyma.03g017200.2.p.Wm82.a4.v1 annot-version=Wm82.a4.v1
MTFAQCSISNMFQHRNHDDFATVAGFAFVYMEDERDAEYAIRRLDRTEFGRKGRRIRVEWTKQERDSRRSGGDSRKSSSNSRPSKTLFVINFDPVNARTRDLERHFDSYGKILNIRIRRNFAFIQFESQEDATRALEATNLSKFMDRVITVEYAIRDDDDRDRRNGYSPDRRGHDSPDGRYGRGRSPSPYRRGRGSPDYGHGSNPSSRPEPRGSPKYDRAESPINGRYDSRSPPPRDRSRS*

>Glyma.03g017200.3.p sequence-type=predicted peptide transcript=Glyma.03g017200.3 locus=Glyma.03g017200 id=Glyma.03g017200.3.p.Wm82.a4.v1 annot-version=Wm82.a4.v1
MTFAQCSISNMFQHRNHDDFATVAGFAFVYMEDERDAEYAIRRLDRTEFGRKGRRIRVEWTKQERDSRRSGGDSRKSSSNSRPSKTLFVINFDPVNARTRDLERHFDSYGKILNIRIRRNFAFIQFESQEDATRALEATNLSKFMDRVITVEYAIRDDDDRDRRNGYSPDRRGHDSPDGRYGRGRSPSPYRRGRGSPDYGHGSNPSSRPEPRGSPKYDRAESPINGRYDSRSPPPRDRSRS*






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