SoyBase SoyBase transitions to NEW site on 10/1/2024
Integrating Genetics and Genomics to Advance Soybean Research

Report for Sequence Feature Glyma.03g016100

Feature Type:gene_model
Chromosome:Gm03
Start:1571098
stop:1572094
Source:JGI
Version:Wm82.a4.v1
High confidence:yes



Annotations for Glyma.03g016100
Database IDAnnotation TypeAnnotation DescriptionAnnotation SourceMatch ScoreEvidence Code
AT2G45760.1AT BAL,BAP2 JGI N/AIEA
GO:0005515GO-mf protein binding JGI N/AIEA
PTHR32246PantherFam INGRESSION PROTEIN FIC1 JGI N/AIEA
PTHR32246:SF20PantherFam C2 DOMAIN-CONTAINING PROTEIN JGI N/AIEA
PF00168Pfam C2 domain JGI N/AIEA

Proteins Associated with Glyma.03g016100
LocusGene SymbolProtein Name
C2-24 C2 domain containing protein gene 24

Gene model name correspondences to Glyma.03g016100 Gene Call Version Wm82.a4.v1
Corresponding NameAnnotation VersionEvidenceComments
Glyma03g01820 Wm82.a1.v1.1IGC As supplied by JGI


Coding sequences of Glyma.03g016100
>Glyma.03g016100.1 sequence-type=CDS polypeptide=Glyma.03g016100.1.p locus=Glyma.03g016100 id=Glyma.03g016100.1.Wm82.a4.v1 annot-version=Wm82.a4.v1
ATGGGGGCAAGCTCGGGTACAGTACTAGAGATCACAGTTATATCATGCGAAAACCTTCGTGTCACGGAGGATCCGTACGTTGTCGTTAGGGCAGAGTCCTTAAAGTGTTGCACCACGAAGATGGCGAAAGATAGTGGGAGCAACAAAACGGGTTTGTTTTCGTGGAACGAGAAGTTGATGCTGAACATGCCCATGCATGCAAGGTCCATCACGTTCGAGGTGCAATGCAACAGGTTCAAGGGTCTTCGACCCGTCGGGGTGGCAAGAATTGCGGTTTCCGATTTTCTCGGCGGCGCTGCCGTGTCGGAAAATTGCTTGCATGAGTTGAGTTACCGGCTGAGGGACTGGGAAGGGAAGGGAAACGGGGTGATTCATTTCGGGGTGAGGGTGGTGCCGCCGGAGGAACGTTCGAATGCTGCCGTGAAACCGGTGAAGGGAATGACGGTGAGTAAGGATTCCGGTGATTATAAGTCAAATGAAGTTGTTGGTGTCCCGTTTTGGTGGAACTACCCTAACGTTATTTGA
Predicted protein sequences of Glyma.03g016100
>Glyma.03g016100.1.p sequence-type=predicted peptide transcript=Glyma.03g016100.1 locus=Glyma.03g016100 id=Glyma.03g016100.1.p.Wm82.a4.v1 annot-version=Wm82.a4.v1
MGASSGTVLEITVISCENLRVTEDPYVVVRAESLKCCTTKMAKDSGSNKTGLFSWNEKLMLNMPMHARSITFEVQCNRFKGLRPVGVARIAVSDFLGGAAVSENCLHELSYRLRDWEGKGNGVIHFGVRVVPPEERSNAAVKPVKGMTVSKDSGDYKSNEVVGVPFWWNYPNVI*






Funded by the USDA-ARS. Developed by the USDA-ARS SoyBase and Legume Clade Database group at the Iowa State University, Ames, IA
 
USDA Logo
Iowa State University Logo