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Report for Sequence Feature Glyma.03g002500

Feature Type:gene_model
Chromosome:Gm03
Start:239467
stop:245267
Source:JGI
Version:Wm82.a4.v1
High confidence:yes



Annotations for Glyma.03g002500
Database IDAnnotation TypeAnnotation DescriptionAnnotation SourceMatch ScoreEvidence Code
AT2G26260.1AT 3BETAHSD/D2,AT3BETAHSD/D2 JGI N/AIEA
1.1.1.170EC 3beta-hydroxysteroid-4alpha-carboxylate 3-dehydrogenase JGI N/AIEA
K07748KEGG Steroid biosynthesis JGI N/AIEA
KOG1430 KOG C-3 sterol dehydrogenase/3-beta-hydroxysteroid dehydrogenase and related dehydrogenases JGI N/AIEA
PTHR10366PantherFam NAD DEPENDENT EPIMERASE/DEHYDRATASE JGI N/AIEA
PTHR10366:SF242PantherFam STEROL-4-ALPHA-CARBOXYLATE 3-DEHYDROGENASE, DECARBOXYLATING JGI N/AIEA
PF02453Pfam Reticulon JGI N/AIEA
PF16363Pfam GDP-mannose 4,6 dehydratase JGI N/AIEA

Gene model name correspondences to Glyma.03g002500 Gene Call Version Wm82.a4.v1
Corresponding NameAnnotation VersionEvidenceComments
Glyma03g00480 Wm82.a1.v1.1IGC As supplied by JGI


Coding sequences of Glyma.03g002500
>Glyma.03g002500.1 sequence-type=CDS polypeptide=Glyma.03g002500.1.p locus=Glyma.03g002500 id=Glyma.03g002500.1.Wm82.a4.v1 annot-version=Wm82.a4.v1
ATGGCAGCGGCGGAAGATAAGTGGTGCGTGGTGACCGGAGGTCGTGGTTTCGCAGCTCGGCATTTAGTGGAAATGCTAATCCGTCACAACGAGTACTGCGTTCGCATCGCCGATTTGGAGGCCAACATTGTTCTCGAGCCCGCCGAGCAGTTAGGGCTTCTCGGCCAGGCCCTGCACTCGGGCCGGGCCCAATATGTCTCCCTTGATCTTCGCAACAAGGCCCAACTTCTAAAAGCGTTGGAGGGAGTTGAGGTTGTGTTCCACATGGCTGCTCCGAACTCTTCCATTAACAACTACCAGCTTCATCATTCCGTCAATGTGCAAGGGACCAAGAATGTCATCGATGCTTGCGTGGAGCTGAACGTGAAGCGTCTCGTTTACACCAGCTCTCCCAGCGTCGTCTTCGACGGCGTTCATGGAATTCATAATGGAAACGAAACAATGCCTTATGCGCATTCGCCTAATGATCATTATTCAGCGACAAAAGCTGAGGGTGAGGCATTGGTTATTAAAGCTAATGGGACTAATGGGCTCCTAACGTGCTGCATACGCCCTAGCAGCATTTTTGGGCCTGGTGACAGGTTGTTGGTGCCTTCACTAGTTGATGCTGCCAGAAAAGGAAAATCTAAGTTCCTTATTGGTGATGGCAATAACGTTTATGATTTCACATATGTTGAAAATGTGGCTCATGCCCATATATGTGCTGATCGAGCTCTAGTTTCAGAAGCACCAGTTTCAGAAAAAGCGGCAGGAGAGGCATATTTCATAACAAATATGGAACCTATGAAATTTTGGGAGTTCGTGTCAGTGGTAGTGGAAGGTCTTGGATATGAAGGGCCAAGAATAAAGATCCCTACCTTTGTTATCATGCCATTTGCACATTTGGTGGAGTGGATATATAGGCTACTAGGCCCATATGGGATGAAGGTGCCCCAGTTAACTCCTTCAAGAATAAGACTCACGTCTTGCAGCAGGACTTTTGATTGCTCAAAAGCAAAGGATCGCCTTGGCTATGCACCCATCGTAACTCTACAGGAGGGTCTGCGTAGGACAATTGAATCATACACACACTTGAAGGCTGAAAATCAACCTAAAACTAAAAGAGAAGGTTCCTCAAAAGCTTCCATATATCTTGGAAGTGGAAGAGTTGCCGACACATTGCTTTGGAAGGATAAAAAGCAAACTTTCATCGCATTGTTAGTCTTGATTGCAATATACTTCAACTTCATTGCATCGGAAAATACCATCATTAGTGCTCTGACAAAGCTTCTGTTGTTTGCATCGATCTTTTTATTCATTCATGGCATTCTACCTGCAAAAATATTGGGGTATACTCTTGAGAAAATACCCAAATCATGGTTTCACTTATCAGAAGATATGTCTCATCAAATTGCTCTCTCAGTAGCCTCATCATGGAATATTGCTGTGAATGTTTTGAAATCCCTTGCAGATGGGAATGATTGGGTGCTGTTCTTCAAGGCTGTTCTCTCTCTGTTCATTCTCAGCTTCCTTGGAGCCTTTTCACTGCAGAGCTTGTATACTATAGGGGTTACCTTTGCGTTTATAGCTTTCTACGTATACGAACAGAAGGAGGAAGAGATTGGTGGCTTATTCATCAAAACACATTCTCTTGGATGCAAATTGAAATCTGATCTCACCAGGAAGTTTCTTTCTTCAAAGAAGATTGATTGA
Predicted protein sequences of Glyma.03g002500
>Glyma.03g002500.1.p sequence-type=predicted peptide transcript=Glyma.03g002500.1 locus=Glyma.03g002500 id=Glyma.03g002500.1.p.Wm82.a4.v1 annot-version=Wm82.a4.v1
MAAAEDKWCVVTGGRGFAARHLVEMLIRHNEYCVRIADLEANIVLEPAEQLGLLGQALHSGRAQYVSLDLRNKAQLLKALEGVEVVFHMAAPNSSINNYQLHHSVNVQGTKNVIDACVELNVKRLVYTSSPSVVFDGVHGIHNGNETMPYAHSPNDHYSATKAEGEALVIKANGTNGLLTCCIRPSSIFGPGDRLLVPSLVDAARKGKSKFLIGDGNNVYDFTYVENVAHAHICADRALVSEAPVSEKAAGEAYFITNMEPMKFWEFVSVVVEGLGYEGPRIKIPTFVIMPFAHLVEWIYRLLGPYGMKVPQLTPSRIRLTSCSRTFDCSKAKDRLGYAPIVTLQEGLRRTIESYTHLKAENQPKTKREGSSKASIYLGSGRVADTLLWKDKKQTFIALLVLIAIYFNFIASENTIISALTKLLLFASIFLFIHGILPAKILGYTLEKIPKSWFHLSEDMSHQIALSVASSWNIAVNVLKSLADGNDWVLFFKAVLSLFILSFLGAFSLQSLYTIGVTFAFIAFYVYEQKEEEIGGLFIKTHSLGCKLKSDLTRKFLSSKKID*






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