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Report for Sequence Feature Glyma.03g001200

Feature Type:gene_model
Chromosome:Gm03
Start:147770
stop:153096
Source:JGI
Version:Wm82.a4.v1
High confidence:yes



Annotations for Glyma.03g001200
Database IDAnnotation TypeAnnotation DescriptionAnnotation SourceMatch ScoreEvidence Code
AT1G77030.1AT JGI N/AIEA
3.6.4.13EC RNA helicase JGI N/AIEA
GO:0005634GO-cc nucleus JGI N/AIEA
GO:0003676GO-mf nucleic acid binding JGI N/AIEA
GO:0003723GO-mf RNA binding JGI N/AIEA
GO:0005524GO-mf ATP binding JGI N/AIEA
GO:0016818GO-mf hydrolase activity, acting on acid anhydrides, in phosphorus-containing anhydrides JGI N/AIEA
K14808KEGG Ribosome biogenesis JGI N/AIEA
PTHR24031PantherFam RNA HELICASE JGI N/AIEA
PTHR24031:SF292PantherFam ATP-DEPENDENT RNA HELICASE DDX54 JGI N/AIEA
PF00270Pfam DEAD/DEAH box helicase JGI N/AIEA
PF00271Pfam Helicase conserved C-terminal domain JGI N/AIEA
PF08147Pfam DBP10CT (NUC160) domain JGI N/AIEA

Gene model name correspondences to Glyma.03g001200 Gene Call Version Wm82.a4.v1
Corresponding NameAnnotation VersionEvidenceComments
Glyma03g00350 Wm82.a1.v1.1IGC As supplied by JGI


Coding sequences of Glyma.03g001200
>Glyma.03g001200.1 sequence-type=CDS polypeptide=Glyma.03g001200.1.p locus=Glyma.03g001200 id=Glyma.03g001200.1.Wm82.a4.v1 annot-version=Wm82.a4.v1
ATGGGACGCGAAGCGACGAAGAAGAAGAAGATGAATAAGAATGCAAAATCTGGGGGTTTTGAATCACTTGGTCTGAATCCCAATGTGTTCAAAGGAATCAAGCGCAAAGGGTACAAAGTGCCCACTCCGATTCAGCGGAAGACCATGCCCCTCATCCTTTCTGGCTCCGACGTCGTTGCCATGGCTCGCACTGGCTCTGGCAAAACGGCGGCGTTTCTTGTCCCCATGCTTCACCGCCTCAACCAGCATATCCCTCAGTCTGGTGTCAGAGCCCTCATTCTATCCCCTACCAGGGACTTGGCCCTTCAGACTCTCAAGTTCACCAAAGAGCTTGGCCACTTCACAGACCTTCGTGTTAGTTTGTTAGTTGGTGGAGATAGTATGGAGATTCAGTTTGAGGAATTAGCTCAGAGTCCTGACATCATAATTGCCACTCCTGGTAGGCTCATGCACCATTTGTCTGAGGTTGATGACATGTCATTGCGCAGCGTCGAGTATGTTGTTTTCGACGAGGCTGATTGTTTATTTGGCATGGGTTTCGCCGAGCAGTTGCATCAGATTCTTGCTCAGCTCGGGGAGAACCGTCAGACCTTGCTTTTCAGTGCCACACTGCCCAGTGCCCTTGCTGAATTTGCCAAGGCTGGTTTGAGAGACCCTCAGCTTGTCCGCCTTGACTTAGAAACTAGAATTAGCCCTGACTTGAAGCTTGCCTTCTTCACTTTGAGGCAGGAGGAGAAGTACTCCGCCTTGCTCTATTTGGTTCGGGAGCACATTGGTTCTGATCAGCAGACATTGATTTTTGTGTCCACCAAGCATCATGTGGAGTTTCTCAATGTTTTGTTTCGCGAAGAGGGTATTGAGCCATCTGTGTGTTATGGCGACATGGACCAAGATGCTCGCAAAATCCATGTATCGAGGTTTAGGGCTAGAAAGACAATGTTGTTGATTGTGACAGATGTTGCGGCCCGGGGCATTGACATTCCATTACTTGATAATGTTATCAATTGGGACTTTCCCCCCAAGCCTAAAATATTTGTCCATCGAGTTGGAAGGGCTGCAAGGGCTGGTCGAACTGGGACTGCATATTCTTTTGTGACTCCTGAGGATATGGCTTACCTTTTGGATCTTCATTTGTTTCTTTCGAAACCAATCAAACCTGCTCCCACCGAAGAAGAGTTCTTGCAGGATATGGATGGAGTAATGTCTAGATGTGAACAGGCAATGGCAAATAGAGAAACCATTTATGGTCGTTTCCCACAAAAAGTCATCGACCTTGTTTCAGACAGAGTTAGGGAAATTATTGATACTTCTGCGGAACTGGAATTATTGCAGAGAACCTGTAAAAATGCATTTCGTTTATATTCAAAAACAAAACCCTTACCCGCAAAGGAGTCCATTAGAAGAGTAAAGGATTTGCCTCATGAAGGGCTGCATCCAATGTTCATGAATGTGTTGGAAACAGGGGAGTTAACGGCACTTGCATTTTCTGAGCATTTGAAAAAGTTTAGGCCAAAGCAGACTATTTTGGAAGCTGAAGGGGAAGCAGCTAAATCAAAGCATCAACAGGGCCCTTCTGGCCAATGGGTCGATGTGATGAAAAGGAAAAGAGCCATTCATGAGAATATTATAAATTTGGTTCGTGAACAGCAGCAGTCTAAGAGTAATAAGGAAAAGGAGGAAATTCAATCAGAAATCAGTCCTTCCATGGAGAAAGGAAGAAAAGCACGTGGTTCTAAGAGGAAGCCCCAAAGTTTCAAGGATGAGGATCACTATATAAGTTCAATACCAAAAAATCAACATATGGAGGCTGGCCTTACAGTAAAAGCTAATGAAGACTTTGCTTCTAATAGATTGGAAGCAGCTGTCCTTGATCTAGTGGCAGATGATGGTACTGGCATTAAGAAACAAAGATCTATGTATCACTGGGATAAGAGGGGTAAAAAGTACATCAAGTTAAACAATGGTGACCGTGTTGCTGCAAATGGAAAGATAAAGACAGAGAGTGGTGCAAAAACAAAGGCAAACAAGACTGGTATATATAAGAAGTGGAAAGAACGCTCACATGGTAGGATATCACTTAAAGGGACAAATAATGATGGTGATTCTCAGGAATCAACAAGTTTGGCAGGATCTTACCAAAGAGGTCGTAGGAATTTTAAAGGCAGCAAGAAGCAGCATTCAATGCCCAATGCTCATGTGCGTTCAGAGATCAAAGATATGGATCAAATTCGAAAGGAGAGGCAGACAAAAGCCAACAGGGTTTCTTATATAAAGAGCAAGTCGACAAAGGGTAAAAAGTTTGGTAAAAATGGTAAAAAAAGAAAAGGCAAATAG

>Glyma.03g001200.3 sequence-type=CDS polypeptide=Glyma.03g001200.3.p locus=Glyma.03g001200 id=Glyma.03g001200.3.Wm82.a4.v1 annot-version=Wm82.a4.v1
ATGGGACGCGAAGCGACGAAGAAGAAGAAGATGAATAAGAATGCAAAATCTGGGGGTTTTGAATCACTTGGTCTGAATCCCAATGTGTTCAAAGGAATCAAGCGCAAAGGGTACAAAGTGCCCACTCCGATTCAGCGGAAGACCATGCCCCTCATCCTTTCTGGCTCCGACGTCGTTGCCATGGCTCGCACTGGCTCTGGCAAAACGGCGGCGTTTCTTGTCCCCATGCTTCACCGCCTCAACCAGCATATCCCTCAGTCTGGTGTCAGAGCCCTCATTCTATCCCCTACCAGGGACTTGGCCCTTCAGACTCTCAAGTTCACCAAAGAGCTTGGCCACTTCACAGACCTTCGTGTTAGTTTGTTAGTTGGTGGAGATAGTATGGAGATTCAGTTTGAGGAATTAGCTCAGAGTCCTGACATCATAATTGCCACTCCTGGTAGGCTCATGCACCATTTGTCTGAGGTTGATGACATGTCATTGCGCAGCGTCGAGTATGTTGTTTTCGACGAGGCTGATTGTTTATTTGGCATGGGTTTCGCCGAGCAGTTGCATCAGATTCTTGCTCAGCTCGGGGAGAACCGTCAGACCTTGCTTTTCAGTGCCACACTGCCCAGTGCCCTTGCTGAATTTGCCAAGGCTGGTTTGAGAGACCCTCAGCTTGTCCGCCTTGACTTAGAAACTAGAATTAGCCCTGACTTGAAGCTTGCCTTCTTCACTTTGAGGCAGGAGGAGAAGTACTCCGCCTTGCTCTATTTGGTTCGGGAGCACATTGGTTCTGATCAGCAGACATTGATTTTTGTGTCCACCAAGCATCATGTGGAGTTTCTCAATGTTTTGTTTCGCGAAGAGGGTATTGAGCCATCTGTGTGTTATGGCGACATGGACCAAGATGCTCGCAAAATCCATGTATCGAGGTTTAGGGCTAGAAAGACAATGTTGTTGATTGTGACAGATGTTGCGGCCCGGGGCATTGACATTCCATTACTTGATAATGTTATCAATTGGGACTTTCCCCCCAAGCCTAAAATATTTGTCCATCGAGTTGGAAGGGCTGCAAGGGCTGGTCGAACTGGGACTGCATATTCTTTTGTGACTCCTGAGGATATGGCTTACCTTTTGGATCTTCATTTGTTTCTTTCGAAACCAATCAAACCTGCTCCCACCGAAGAAGAGTTCTTGCAGGATATGGATGGAGTAATGTCTAGATGTGAACAGGCAATGGCAAATAGAGAAACCATTTATGGTCGTTTCCCACAAAAAGTCATCGACCTTGTTTCAGACAGAGTTAGGGAAATTATTGATACTTCTGCGGAACTGGAATTATTGCAGAGAACCTGTAAAAATGCATTTCGTTTATATTCAAAAACAAAACCCTTACCCGCAAAGGAGTCCATTAGAAGAGTAAAGGATTTGCCTCATGAAGGGCTGCATCCAATGTTCATGAATGTGTTGGAAACAGGGGAGTTAACGGCACTTGCATTTTCTGAGCATTTGAAAAAGTTTAGGCCAAAGCAGACTATTTTGGAAGCTGAAGGGGAAGCAGCTAAATCAAAGCATCAACAGGGCCCTTCTGGCCAATGGGTCGATGTGATGAAAAGGAAAAGAGCCATTCATGAGAATATTATAAATTTGGTTCGTGAACAGCAGCAGTCTAAGAGTAATAAGGAAAAGGAGGAAATTCAATCAGAAATCAGTCCTTCCATGGAGAAAGGAAGAAAAGCAGCACGTGGTTCTAAGAGGAAGCCCCAAAGTTTCAAGGATGAGGATCACTATATAAGTTCAATACCAAAAAATCAACATATGGAGGCTGGCCTTACAGTAAAAGCTAATGAAGACTTTGCTTCTAATAGATTGGAAGCAGCTGTCCTTGATCTAGTGGCAGATGATGGTACTGGCATTAAGAAACAAAGATCTATGTATCACTGGGATAAGAGGGGTAAAAAGTACATCAAGTTAAACAATGGTGACCGTGTTGCTGCAAATGGAAAGATAAAGACAGAGAGTGGTGCAAAAACAAAGGCAAACAAGACTGGTATATATAAGAAGTGGAAAGAACGCTCACATGGTAGGATATCACTTAAAGGGACAAATAATGATGGTGATTCTCAGGAATCAACAAGTTTGGCAGGATCTTACCAAAGAGGTCGTAGGAATTTTAAAGGCAGCAAGAAGCAGCATTCAATGCCCAATGCTCATGTGCGTTCAGAGATCAAAGATATGGATCAAATTCGAAAGGAGAGGCAGACAAAAGCCAACAGGGTTTCTTATATAAAGAGCAAGTCGACAAAGGGTAAAAAGTTTGGTAAAAATGGTAAAAAAAGAAAAGGCAAATAG
Predicted protein sequences of Glyma.03g001200
>Glyma.03g001200.1.p sequence-type=predicted peptide transcript=Glyma.03g001200.1 locus=Glyma.03g001200 id=Glyma.03g001200.1.p.Wm82.a4.v1 annot-version=Wm82.a4.v1
MGREATKKKKMNKNAKSGGFESLGLNPNVFKGIKRKGYKVPTPIQRKTMPLILSGSDVVAMARTGSGKTAAFLVPMLHRLNQHIPQSGVRALILSPTRDLALQTLKFTKELGHFTDLRVSLLVGGDSMEIQFEELAQSPDIIIATPGRLMHHLSEVDDMSLRSVEYVVFDEADCLFGMGFAEQLHQILAQLGENRQTLLFSATLPSALAEFAKAGLRDPQLVRLDLETRISPDLKLAFFTLRQEEKYSALLYLVREHIGSDQQTLIFVSTKHHVEFLNVLFREEGIEPSVCYGDMDQDARKIHVSRFRARKTMLLIVTDVAARGIDIPLLDNVINWDFPPKPKIFVHRVGRAARAGRTGTAYSFVTPEDMAYLLDLHLFLSKPIKPAPTEEEFLQDMDGVMSRCEQAMANRETIYGRFPQKVIDLVSDRVREIIDTSAELELLQRTCKNAFRLYSKTKPLPAKESIRRVKDLPHEGLHPMFMNVLETGELTALAFSEHLKKFRPKQTILEAEGEAAKSKHQQGPSGQWVDVMKRKRAIHENIINLVREQQQSKSNKEKEEIQSEISPSMEKGRKARGSKRKPQSFKDEDHYISSIPKNQHMEAGLTVKANEDFASNRLEAAVLDLVADDGTGIKKQRSMYHWDKRGKKYIKLNNGDRVAANGKIKTESGAKTKANKTGIYKKWKERSHGRISLKGTNNDGDSQESTSLAGSYQRGRRNFKGSKKQHSMPNAHVRSEIKDMDQIRKERQTKANRVSYIKSKSTKGKKFGKNGKKRKGK*

>Glyma.03g001200.3.p sequence-type=predicted peptide transcript=Glyma.03g001200.3 locus=Glyma.03g001200 id=Glyma.03g001200.3.p.Wm82.a4.v1 annot-version=Wm82.a4.v1
MGREATKKKKMNKNAKSGGFESLGLNPNVFKGIKRKGYKVPTPIQRKTMPLILSGSDVVAMARTGSGKTAAFLVPMLHRLNQHIPQSGVRALILSPTRDLALQTLKFTKELGHFTDLRVSLLVGGDSMEIQFEELAQSPDIIIATPGRLMHHLSEVDDMSLRSVEYVVFDEADCLFGMGFAEQLHQILAQLGENRQTLLFSATLPSALAEFAKAGLRDPQLVRLDLETRISPDLKLAFFTLRQEEKYSALLYLVREHIGSDQQTLIFVSTKHHVEFLNVLFREEGIEPSVCYGDMDQDARKIHVSRFRARKTMLLIVTDVAARGIDIPLLDNVINWDFPPKPKIFVHRVGRAARAGRTGTAYSFVTPEDMAYLLDLHLFLSKPIKPAPTEEEFLQDMDGVMSRCEQAMANRETIYGRFPQKVIDLVSDRVREIIDTSAELELLQRTCKNAFRLYSKTKPLPAKESIRRVKDLPHEGLHPMFMNVLETGELTALAFSEHLKKFRPKQTILEAEGEAAKSKHQQGPSGQWVDVMKRKRAIHENIINLVREQQQSKSNKEKEEIQSEISPSMEKGRKAARGSKRKPQSFKDEDHYISSIPKNQHMEAGLTVKANEDFASNRLEAAVLDLVADDGTGIKKQRSMYHWDKRGKKYIKLNNGDRVAANGKIKTESGAKTKANKTGIYKKWKERSHGRISLKGTNNDGDSQESTSLAGSYQRGRRNFKGSKKQHSMPNAHVRSEIKDMDQIRKERQTKANRVSYIKSKSTKGKKFGKNGKKRKGK*






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