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Report for Sequence Feature Glyma.03G201200

Feature Type:gene_model
Chromosome:Gm03
Start:40977183
stop:40977806
Source:JGI
Version:Wm82.a2.v1
High confidence:yes



A previous version of this gene model can be found here:

Database IDAnnotation TypeAnnotation DescriptionAnnotation SourceMatch ScoreEvidence Code
AT2G35980.1AT Late embryogenesis abundant (LEA) hydroxyproline-rich glycoprotein family JGI N/AIEA
GO:0006952GO-bp defense response EnsemblGenomesN/AIEA
GO:0007165GO-bp signal transduction EnsemblGenomesN/AIEA
GO:0009506GO-cc plasmodesma EnsemblGenomesN/AIEA
GO:0016020GO-cc membrane EnsemblGenomesN/AIEA
GO:0016021GO-cc integral component of membrane EnsemblGenomesN/AIEA
GO:0046658GO-cc anchored component of plasma membrane EnsemblGenomesN/AIEA
GO:0004871GO-mf signal transducer activity EnsemblGenomesN/AIEA
PTHR19957Panther SYNTAXIN JGI N/AIEA
PTHR19957:SF11Panther JGI N/AIEA
PF03168PFAM Late embryogenesis abundant protein JGI N/AIEA

LocusGene SymbolProtein Name
LEA2-14 late embryogenesis abundant 2 gene 14

Gene expression representations made with eFP at the University of Toronto.
Waese et al. 2017, Plant Cell 29(8):1806-1821 ePlant: Visualizing and Exploring Multiple Levels of Data for Hypothesis Generation in Plant Biology
Libault et al. 2010, Plant Phys 152(2):541-552.
Complete Transcriptome of the Soybean Root Hair Cell, a Single-Cell Model, and Its Alteration in Response to Bradyrhizobium japonicum Infection
Severin et al. 2010, BMC Plant Biology 10:160
RNA-Seq Atlas of Glycine max: A guide to the soybean transcriptome

To see more experiments click HERE


View a gene family containing related genes from other legumes at LIS

Gene families from Phytozome are displayed using the PhyloTree viewer developed by LIS.


View gene and ortholog information at GlycineMine

Gene information in GlycineMine developed by LIS.



View a gene family containing related genes from other plant species at PhyloGenes

Gene families from PhyloGenes.


Corresponding NameAnnotation VersionEvidenceComments
Glyma.03g201200 Wm82.a4.v1ISS As supplied by JGI
Glyma03g35950 Wm82.a1.v1.1IGC As supplied by JGI


>Glyma.03g201200.1 sequence-type=CDS polypeptide=Glyma.03g201200.1.p locus=Glyma.03g201200 ID=Glyma.03g201200.1.Wm82.a2.v1 annot-version=Wm82.a2.v1
ATGGCAGATTATAAGCAACACCACGGAAGAAGCTGCGGCTGCTGCTGCCTCTTTGGAATCTTGTGGAAGATTGTGGTTGCACTCATTGTCCTCGTTGGTCTTGTATTCCTCATATTTTGGCTGGTTGTTCAACCCCGCTACTTCAAGTTCCACGTCACGGAAGCGGACCTAACTCAATTTGAGTACTATCCAAACAACAACACCCTTCACTACAACATGGTCCTCAATTTCACTGCACGCAACCCCAACAAGAAGCTCAGCATATACTACGACAAAGTTGAGGCATTAGCATTCTACGAGGATGCCAGGTTCGCCAATTACGATGTCATAACTCACATGAACTCCTTCCGCCAGTACAAGAAGAGCACCAGTCCCATGAGCGCCGTTTTCTCGGGGCAGAAGGTGTTGATGCTCAACAACGAACAAGTCTCTCAGTTCAACCAAGACAAGAGTGTTGGAGCTTATGATATCTATGTGAAGCTCAACTTCAGGATTCGGTTCAGGCTCGGGGACTCGATTTCCCGTCACTTGAAGCCCAAGGTCAAATGTGATCTCAAGGTTCCCTTGAACAAAAGTGGCACCTTTACTCTGTTTCAGACCACCAAGTGCCATGTCAATGTCTAG

>Glyma.03g201200.1.p sequence-type=predicted peptide transcript=Glyma.03g201200.1 locus=Glyma.03g201200 ID=Glyma.03g201200.1.Wm82.a2.v1 annot-version=Wm82.a2.v1
MADYKQHHGRSCGCCCLFGILWKIVVALIVLVGLVFLIFWLVVQPRYFKFHVTEADLTQFEYYPNNNTLHYNMVLNFTARNPNKKLSIYYDKVEALAFYEDARFANYDVITHMNSFRQYKKSTSPMSAVFSGQKVLMLNNEQVSQFNQDKSVGAYDIYVKLNFRIRFRLGDSISRHLKPKVKCDLKVPLNKSGTFTLFQTTKCHVNV*







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