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Integrating Genetics and Genomics to Advance Soybean Research
SoyBase
SoyBase transitions to NEW site on 10/1/2024
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A previous version of this gene model can be found here:
| Database ID | Annotation Type | Annotation Description | Annotation Source | Match Score | Evidence Code |
|---|---|---|---|---|---|
| AT5G56030.1 | AT | heat shock protein 81-2 | JGI | N/A | IEA |
| GO:0006418 | GO-bp | tRNA aminoacylation for protein translation | JGI | N/A | IEA |
| GO:0006457 | GO-bp | protein folding | EnsemblGenomes | N/A | IEA |
| GO:0006457 | GO-bp | protein folding | JGI | N/A | IEA |
| GO:0006950 | GO-bp | response to stress | EnsemblGenomes | N/A | IEA |
| GO:0006950 | GO-bp | response to stress | JGI | N/A | IEA |
| GO:0007264 | GO-bp | small GTPase mediated signal transduction | EnsemblGenomes | N/A | IEA |
| GO:0050790 | GO-bp | regulation of catalytic activity | EnsemblGenomes | N/A | IEA |
| GO:0005622 | GO-cc | intracellular | EnsemblGenomes | N/A | IEA |
| GO:0000166 | GO-mf | nucleotide binding | JGI | N/A | IEA |
| GO:0004812 | GO-mf | aminoacyl-tRNA ligase activity | JGI | N/A | IEA |
| GO:0005092 | GO-mf | GDP-dissociation inhibitor activity | EnsemblGenomes | N/A | IEA |
| GO:0005524 | GO-mf | ATP binding | EnsemblGenomes | N/A | IEA |
| GO:0005524 | GO-mf | ATP binding | JGI | N/A | IEA |
| GO:0051082 | GO-mf | unfolded protein binding | EnsemblGenomes | N/A | IEA |
| GO:0051082 | GO-mf | unfolded protein binding | JGI | N/A | IEA |
| PTHR11528 | Panther | HEAT SHOCK PROTEIN 90 | JGI | N/A | IEA |
| PF00183 | PFAM | Hsp90 protein | JGI | N/A | IEA |
| PF00587 | PFAM | tRNA synthetase class II core domain (G, H, P, S and T) | JGI | N/A | IEA |
| PF00996 | PFAM | GDP dissociation inhibitor | JGI | N/A | IEA |
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Glyma.03G114400 not represented in the dataset |
Glyma.03G114400 not represented in the dataset |
| Libault et al. 2010, Plant Phys 152(2):541-552. Complete Transcriptome of the Soybean Root Hair Cell, a Single-Cell Model, and Its Alteration in Response to Bradyrhizobium japonicum Infection |
Severin et al. 2010, BMC Plant Biology 10:160 RNA-Seq Atlas of Glycine max: A guide to the soybean transcriptome |
Gene families from Phytozome are displayed using the PhyloTree viewer developed by LIS.
Gene information in GlycineMine developed by LIS.
Gene families from PhyloGenes.
>Glyma.03g114400.1 sequence-type=CDS polypeptide=Glyma.03g114400.1.p locus=Glyma.03g114400 ID=Glyma.03g114400.1.Wm82.a2.v1 annot-version=Wm82.a2.v1 ATGGATGAGGAGTACGATGTGAACATGTTGGGTACGGGTCTCAAGGAGTGCATTCTCAACGGTCTTCTCTCTGTCGTTGGCCTCAGGAGATTCAGGGGAGATGACAAGTCTCTTCTATATTTGGGCACTAGCAGAGACTACAACATTCATATGAACCCTAAGTTTATTATGGCTAATGGAAATTTGGTGCGGGTTCTTATACATGCCAATGTTACCAAGTATCTCTATTTCAAAGCTGTGGATGGAAGCTATGTGTTTAATAAAGGAAAGGTTCATAAGGTGCCTGCAAACGACATGGAGACCTTGAAGTCCCTACTTATGGGGCTATTTGCAAAACACTGGACACATAAGTTTTTCATTTATGTGCAAAAATACAATGAGAACTTCATTGGTCATGCTTTGGCGCTTCATAGCGATGATCGCTACTTGGCTGAGCTAGCACTGGACATTGTGAAGAGAATAAAGTTATATGCAGAGTCTCTTGTACACTTTCAAGGAGGGTCACCTTACATATATCCTTTATATGGTTTAGGAGAGCTTCCCCAGGCATTTTCACAACTTAGTGTTGTTTATGGTGAAACATATATGTTGAACAAGCCTGAGTGCAAGGTAGAATTTGACGAGGAAGGAAAGATTGTTGGTGTCACATCTGAAGGGGAGCTTCTTTTTTTGAGGTATGACTTGACAATTCCCTTTGCGAGGTTTGTGGCTATGAATGGTCTGACATCTTTCAAAAGGTACCAAATAGCCAAGGTTTACAGAGTGAATAACTCATCCAAGGGAAGATATCGTGAATTTTATCAATGTGACTTTGATACTGCTGGTAATCCTAGCGTGTCTGAAATTATGGGTCCGGACTTTGAGGTTGTTAGGATTTTGACTGAACTAGTTAATGAGTTGGACATTGGGGAATGTGAGATAAAGTTGAATGATAGAAAGTTACTAGATGGCATGCTGCAAATACGTAGAGTACCTCGTGAAAATTTTAGGACAATATGTTCAAATATTGACAAGTTAGACAAACAATCTTTTCAACAGCTAAGAAAAGAAATGGTGGCAGAAAAAGGATTAACCGCTGAGACAACTAATAGAATTGAAACTGAAGAGCATCTGCCTGTTAAGAATTTTTCTGTTGCGGGTCACCAGGAGTTTAAGGTTGTCCTCTTTATCCCCATGAGGGCACCTTTTAATCTCTTTGACACTAGGAAGAATCCTAACAAAATCAAATTGTATGTCCTTCGTGTTTTCATCATGGACAACTGCAAGGAGTTAATGCCAAAATATCTTAGCTTTGTTAAGGAAATGTTGCAACAGAACAAGATCCTAAAATTGGTCAAGAAATGCATTGAGATGTTCTTTGAAATTGTGGAGAACAAGAAGGACTATAACAGGTTTTATGAAGCCTTCCTTAAGTATTTGAAACTTGGTATTCATGAGGTTTCTCATAACAAGACAAAGCTTGTTGAATTGCTCAGGTATCACCCCACTAAGAATGGTGATGAGATGACCAGCCTCAAGGACTATGTTACCAGGATGAAGGAAGGGCAGAATGACATCTACTACATTACTGGTGAAAGCAAGAAAGTTGTTGAGAATTCCCCTTTTCTTGAAAAGCTTAAGAAGAAGGGGTACGAGGTTCTCTACATGGTTGATGCTATTGATGAGTATGTTCATAAGGAATTTGAGGGAACGGAGTTGGTCTCTGCTACTAAGGAAGGCATGAAACTTGACGAGAGTGAAGACGAGAAGAAAAAAAAGGAAGAATTGAAGGAGAAATTTGAGGGTCTTTGCCATGTGATCAAGGATGTGTTGGTGGAGAAAGTTGTGGTGTCTAATCATCATGTGGATTCTCCTTGCTGTTTGGTAACTGGTAAATACGGACGGAGCACAAACATGGAGAGGATCATGAAGGCTCAGGCTTTGAGAAACAGCAGCATGAGTGGCCAGATGTCTAGCAAGAAGACCATGGAGATCAACCCAGACAATGGTATCATGGAGGAGTTGAGGAAGAGAGTTGAAGCTGACAAGAATGGTAAGTCTGTGAAAGACCATGTGTTGCTTCTCTTTGAGACTACCCTTTTGACGCCAAGTTTTAGCCTTGATGATCCCAACACATTTGCTTTGGTTTGGAAGTCCCTTTACAACATCAAGGGCAAGGTTGTTTTTTTCCAGCAGAGAGTGTTGATAGCAATTGCGCACAAGTCAACAGGCCCAAGAGGATAG
>Glyma.03g114400.1.p sequence-type=predicted peptide transcript=Glyma.03g114400.1 locus=Glyma.03g114400 ID=Glyma.03g114400.1.Wm82.a2.v1 annot-version=Wm82.a2.v1 MDEEYDVNMLGTGLKECILNGLLSVVGLRRFRGDDKSLLYLGTSRDYNIHMNPKFIMANGNLVRVLIHANVTKYLYFKAVDGSYVFNKGKVHKVPANDMETLKSLLMGLFAKHWTHKFFIYVQKYNENFIGHALALHSDDRYLAELALDIVKRIKLYAESLVHFQGGSPYIYPLYGLGELPQAFSQLSVVYGETYMLNKPECKVEFDEEGKIVGVTSEGELLFLRYDLTIPFARFVAMNGLTSFKRYQIAKVYRVNNSSKGRYREFYQCDFDTAGNPSVSEIMGPDFEVVRILTELVNELDIGECEIKLNDRKLLDGMLQIRRVPRENFRTICSNIDKLDKQSFQQLRKEMVAEKGLTAETTNRIETEEHLPVKNFSVAGHQEFKVVLFIPMRAPFNLFDTRKNPNKIKLYVLRVFIMDNCKELMPKYLSFVKEMLQQNKILKLVKKCIEMFFEIVENKKDYNRFYEAFLKYLKLGIHEVSHNKTKLVELLRYHPTKNGDEMTSLKDYVTRMKEGQNDIYYITGESKKVVENSPFLEKLKKKGYEVLYMVDAIDEYVHKEFEGTELVSATKEGMKLDESEDEKKKKEELKEKFEGLCHVIKDVLVEKVVVSNHHVDSPCCLVTGKYGRSTNMERIMKAQALRNSSMSGQMSSKKTMEINPDNGIMEELRKRVEADKNGKSVKDHVLLLFETTLLTPSFSLDDPNTFALVWKSLYNIKGKVVFFQQRVLIAIAHKSTGPRG*
| Funded by the USDA-ARS. Developed by the USDA-ARS SoyBase and Legume Clade Database group at the Iowa State University, Ames, IA | ||
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