Glyma.03G109400

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Report for Sequence Feature Glyma.03G109400

Feature Type:	gene_model
Chromosome:	Gm03
Start:	31152754
stop:	31159036
Source:	JGI
Version:	Wm82.a2.v1
High confidence:	yes

A previous version of this gene model can be found here:

Annotations for Glyma.03G109400

Database ID	Annotation Type	Annotation Description	Annotation Source	Match Score	Evidence Code
AT2G44770.1	AT	ELMO/CED-12 family protein	JGI	N/A	IEA
GO:0006909	GO-bp	phagocytosis	JGI	N/A	IEA
GO:0005856	GO-cc	cytoskeleton	JGI	N/A	IEA
KOG2998	KOG	Uncharacterized conserved protein	JGI	N/A	IEA
PTHR12771	Panther	ENGULFMENT AND CELL MOTILITY	JGI	N/A	IEA
PTHR12771:SF3	Panther	CED-12	JGI	N/A	IEA
PF04727	PFAM	ELMO/CED-12 family	JGI	N/A	IEA

Expression Patterns of Glyma.03G109400

Gene expression representations made with eFP at the University of Toronto.
Waese et al. 2017, Plant Cell 29(8):1806-1821 ePlant: Visualizing and Exploring Multiple Levels of Data for Hypothesis Generation in Plant Biology

Glyma.03G109400 not represented in the dataset	Glyma.03G109400 not represented in the dataset
Libault et al. 2010, Plant Phys 152(2):541-552. Complete Transcriptome of the Soybean Root Hair Cell, a Single-Cell Model, and Its Alteration in Response to Bradyrhizobium japonicum Infection	Severin et al. 2010, BMC Plant Biology 10:160 RNA-Seq Atlas of Glycine max: A guide to the soybean transcriptome

To see more experiments click HERE

Related Legume Genes

Gene families from Phytozome are displayed using the PhyloTree viewer developed by LIS.

Gene information in GlycineMine developed by LIS.

Related Plant Genes

Gene families from PhyloGenes.

Gene model name correspondences to Glyma.03G109400 Gene Call Version Wm82.a2.v1

Corresponding Name	Annotation Version	Evidence	Comments
Glyma.03g109400	Wm82.a4.v1	ISS	As supplied by JGI
Glyma03g25810	Wm82.a1.v1.1	IGC	As supplied by JGI

Transcripts of Glyma.03G109400

Limit To All Plant Sequences

>Glyma.03g109400.2 sequence-type=transcript locus=Glyma.03g109400 ID=Glyma.03g109400.2.Wm82.a2.v1 annot-version=Wm82.a2.v1
TTTCTTTCGAACCTGCTCAATGGCCAATTAATAGCCTCATTGATTTCCCCCCTTGTTGAAAAAATAAATATAAATATAAATTCTAAATCCATCCTCTTCTACTGTCTCCCTCTCTTTCTAAATCTTAACAAAACGCCAACACCATAACCAAAACGCACACTCACACAGAGAGAAAACTCTTTCTCCTTCTTCTGTAGTTGTTTTCTTCTCTTCCAGATCTTCGGCGCAGAAGAACCTCCTGAAATTCGATCGCTTCATTCATTCACGTTTTGCTTTCTTCAGATTTTCGTCAATATTAGAGATTCTACGTTCGCACGATTATGAAGATGATGCTATAGCAGCAGCAGTAGAATTCGTTATTGCAAAAGAAGAAGAAAATGGACGATAGAGGTAGCTCATTCGTTGCTGTTAGGAGAATTCCTCAAGGAGAAACCTGCCATCCAAATTCTGAGGTTGTGGCAGGGTCAGCTGCATGGCTAGGTCGAGGTCTGTCTTGTGTCTGTGTACAAAGAAGAGATAGTGATGTTTCTAACACTTTCGATTTAACCCTAGCCCAGGAGGAATGCTTGCAGAGGATACAGAGACGTATAGATGTTCCATATGATAGTTCTATAATTGAGCACCAGGATGCCCTTAGGGCTTTGTGGAATGCTGCGTTTCCTGAAGAAGAACTTCATGGCTTGATATCTGAGCAATGGAAGGAAATGGGCTGGCAAGGAAAAGATCCATCAACAGATTTTAGGGGTGGTGGTTTTATATCATTGGAGAATTTTCTCTTCTTTGCTAGGAATTTCCCGAAATCCTTCCAGGTTCTTTTACGCAAGCAGGAAGGAGATCGATCAGTGTGGGAATACCCATTTGCAGTTGCTGGTGTTAACATCACATACATGCTGATACAAATGCTTGATCTTGAAGCAGTCAAGCCACGCAATCTGGTTGGAGCAACTTTTCTAAAATTTCTTGCAGAAAATGGGTCAGCTTTTGATCTTCTCTATTGCATAACTTTCAAGCTAATGGATCATCAATGGCTTACTATGCGTGCCTCATACATGGATTTTAATGCAGTGATGAAAGAAACACGACGTCAGCTAGAGAAAGAGCTTCTCATTGAAGACATAGCCCGGCTTGAAGATTTACCCTCATACAAATTACTTTCCCGATAATACCAGTCCCAAAAACCTGTCACTCCTATTTTTCGCCAAGAGGCTTTTGTATATGATGTGATGTGATGCTCCTCCTATCATAATTTTCACTCCTGTCAATTCAGCATTTTTAGTAACATTTCAGCAAGAATGAGCTATAACATGTAAAACTGATGTGAGCTTTAAGCCTTATACTTGATGTCACAAGGTTTGAGATGGATGCAGCAGTTAAGCTTTTAGTCTAGTTGAAAGATGATTTTGTTGGCCTGACATGCTGCCAGGAGGCTGAAATGTAAATTTGCTTGGTATTGGGTATTAATGATTTGTGGTTTGCCACTTTACCAATATATTTCCTTGTGGTGTTATAACTGGCAATTGCAGCTTGCAGTAATGTCTTTCAGATTGCATCTTCTTGATCTAGTTTGATAGACTGCATATGTTTGCAGATGAACTTGCCTATAAGAGTAATTGTGATATCTATCCGGAGTTGATAAAGATTGTATTCCTGATAGTAACACGTTTCGTTTTATCATATCTTGAATGTTTTATG

>Glyma.03g109400.3 sequence-type=transcript locus=Glyma.03g109400 ID=Glyma.03g109400.3.Wm82.a2.v1 annot-version=Wm82.a2.v1
ACTTCTTACTTTTCTCTCTTTCTCTCTCTTTACCTTCATAAAAAAAATGAAAAACATATTATTATTATTCTTAAATTGAATATCATATGCATGGAGTCATGGACCGAAATCGAGATCGAACCGTTTTGTAATAGGCCGCTTCATAAACCCGAGTTGCGTGATGTTTGCTGCTATTCTTAATTGCATTGCAGAGGTTGTGGCAGGGTCAGCTGCATGGCTAGGTCGAGGTCTGTCTTGTGTCTGTGTACAAAGAAGAGATAGTGATGTTTCTAACACTTTCGATTTAACCCTAGCCCAGGAGGAATGCTTGCAGAGGATACAGAGACGTATAGATGTTCCATATGATAGTTCTATAATTGAGCACCAGGATGCCCTTAGGGCTTTGTGGAATGCTGCGTTTCCTGAAGAAGAACTTCATGGCTTGATATCTGAGCAATGGAAGGAAATGGGCTGGCAAGGAAAAGATCCATCAACAGATTTTAGGGGTGGTGGTTTTATATCATTGGAGAATTTTCTCTTCTTTGCTAGGAATTTCCCGAAATCCTTCCAGGTTCTTTTACGCAAGCAGGAAGGAGATCGATCAGTGTGGGAATACCCATTTGCAGTTGCTGGTGTTAACATCACATACATGCTGATACAAATGCTTGATCTTGAAGCAGTCAAGCCACGCAATCTGGTTGGAGCAACTTTTCTAAAATTTCTTGCAGAAAATGGGTCAGCTTTTGATCTTCTCTATTGCATAACTTTCAAGCTAATGGATCATCAATGGCTTACTATGCGTGCCTCATACATGGATTTTAATGCAGTGATGAAAGAAACACGACGTCAGCTAGAGAAAGAGCTTCTCATTGAAGACATAGCCCGGCTTGAAGATTTACCCTCATACAAATTACTTTCCCGATAATACCAGTCCCAAAAACCTGTCACTCCTATTTTTCGCCAAGAGGCTTTTGTATATGATGTGATGTGATGCTCCTCCTATCATAATTTTCACTCCTGTCAATTCAGCATTTTTAGTAACATTTCAGCAAGAATGAGCTATAACATGTAAAACTGATGTGAGCTTTAAGCCTTATACTTGATGTCACAAGGTTTGAGATGGATGCAGCAGTTAAGCTTTTAGTCTAGTTGAAAGATGATTTTGTTGGCCTGACATGCTGCCAGGAGGCTGAAATGTAAATTTGCTTGGTATTGGGTATTAATGATTTGTGGTTTGCCACTTTACCAATATATTTCCTTGTGGTGTTATAACTGGCAATTGCAGCTTGCAGTAATGTCTTTCAGATTGCATCTTCTTGATCTAGTTTGATAGACTGCATATGTTTGCAGATGAACTTGCCTATAAGAGTAATTGTGATATCTATCCGGAGTTGATAAAGATTGTATTCCTGATAGTAACACGTTTCGTTTTATCATATCTTGAATGTTTTATG

>Glyma.03g109400.4 sequence-type=transcript locus=Glyma.03g109400 ID=Glyma.03g109400.4.Wm82.a2.v1 annot-version=Wm82.a2.v1
ATTCTTAAATTGAATATCATATGCATGGAGTCATGGACCGAAATCGAGATCGAACCGTTTTGTAATAGGCCGCTTCATAAACCCGAGTTGCGTGATGTTTGCTGCTATTCTTAATTGCATTGAGGTTGTGGCAGGGTCAGCTGCATGGCTAGGTCGAGGTCTGTCTTGTGTCTGTGTACAAAGAAGAGATAGTGATGTTTCTAACACTTTCGATTTAACCCTAGCCCAGGAGGAATGCTTGCAGAGGATACAGAGACGTATAGATGTTCCATATGATAGTTCTATAATTGAGCACCAGGATGCCCTTAGGGCTTTGTGGAATGCTGCGTTTCCTGAAGAAGAACTTCATGGCTTGATATCTGAGCAATGGAAGGAAATGGGCTGGCAAGGAAAAGATCCATCAACAGATTTTAGGGGTGGTGGTTTTATATCATTGGAGAATTTTCTCTTCTTTGCTAGGAATTTCCCGAAATCCTTCCAGGTTCTTTTACGCAAGCAGGAAGGAGATCGATCAGTGTGGGAATACCCATTTGCAGTTGCTGGTGTTAACATCACATACATGCTGATACAAATGCTTGATCTTGAAGCAGTCAAGCCACGCAATCTGGTTGGAGCAACTTTTCTAAAATTTCTTGCAGAAAATGGGTCAGCTTTTGATCTTCTCTATTGCATAACTTTCAAGCTAATGGATCATCAATGGCTTACTATGCGTGCCTCATACATGGATTTTAATGCAGTGATGAAAGAAACACGACGTCAGCTAGAGAAAGAGCTTCTCATTGAAGACATAGCCCGGCTTGAAGATTTACCCTCATACAAATTACTTTCCCGATAATACCAGTCCCAAAAACCTGTCACTCCTATTTTTCGCCAAGAGGCTTTTGTATATGATGTGATGTGATGCTCCTCCTATCATAATTTTCACTCCTGTCAATTCAGCATTTTTAGTAACATTTCAGCAAGAATGAGCTATAACATGTAAAACTGATGTGAGCTTTAAGCCTTATACTTGATGTCACAAGGTTTGAGATGGATGCAGCAGTTAAGCTTTTAGTCTAGTTGAAAGATGATTTTGTTGGCCTGACATGCTGCCAGGAGGCTGAAATGTAAATTTGCTTGGTATTGGGTATTAATGATTTGTGGTTTGCCACTTTACCAATATATTTCCTTGTGGTGTTATAACTGGCAATTGCAGCTTGCAGTAATGTCTTTCAGATTGCATCTTCTTGATCTAGTTTGATAGACTGCATATGTTTGCAGATGAACTTGCCTATAAGAGTAATTGTGATATCTATCCGGAGTTGATAAAGATTGTATTCCTGATAGTAACACGTTTCGTTTTATCATATCTTGAATGTTTTATG

Coding sequences of Glyma.03G109400

Limit To All Plant Sequences

>Glyma.03g109400.1 sequence-type=CDS polypeptide=Glyma.03g109400.1.p locus=Glyma.03g109400 ID=Glyma.03g109400.1.Wm82.a2.v1 annot-version=Wm82.a2.v1
ATGGACGATAGAGGTAGCTCATTCGTTGCTGTTAGGAGAATTCCTCAAGGAGAAACCTGCCATCCAAATTCTGCAGAGGTTGTGGCAGGGTCAGCTGCATGGCTAGGTCGAGGTCTGTCTTGTGTCTGTGTACAAAGAAGAGATAGTGATGTTTCTAACACTTTCGATTTAACCCTAGCCCAGGAGGAATGCTTGCAGAGGATACAGAGACGTATAGATGTTCCATATGATAGTTCTATAATTGAGCACCAGGATGCCCTTAGGGCTTTGTGGAATGCTGCGTTTCCTGAAGAAGAACTTCATGGCTTGATATCTGAGCAATGGAAGGAAATGGGCTGGCAAGGAAAAGATCCATCAACAGATTTTAGGGGTGGTGGTTTTATATCATTGGAGAATTTTCTCTTCTTTGCTAGGAATTTCCCGAAATCCTTCCAGGTTCTTTTACGCAAGCAGGAAGGAGATCGATCAGTGTGGGAATACCCATTTGCAGTTGCTGGTGTTAACATCACATACATGCTGATACAAATGCTTGATCTTGAAGCAGTCAAGCCACGCAATCTGGTTGGAGCAACTTTTCTAAAATTTCTTGCAGAAAATGGGTCAGCTTTTGATCTTCTCTATTGCATAACTTTCAAGCTAATGGATCATCAATGGCTTACTATGCGTGCCTCATACATGGATTTTAATGCAGTGATGAAAGAAACACGACGTCAGCTAGAGAAAGAGCTTCTCATTGAAGACATAGCCCGGCTTGAAGATTTACCCTCATACAAATTACTTTCCCGATAA

>Glyma.03g109400.2 sequence-type=CDS polypeptide=Glyma.03g109400.2.p locus=Glyma.03g109400 ID=Glyma.03g109400.2.Wm82.a2.v1 annot-version=Wm82.a2.v1
ATGGACGATAGAGGTAGCTCATTCGTTGCTGTTAGGAGAATTCCTCAAGGAGAAACCTGCCATCCAAATTCTGAGGTTGTGGCAGGGTCAGCTGCATGGCTAGGTCGAGGTCTGTCTTGTGTCTGTGTACAAAGAAGAGATAGTGATGTTTCTAACACTTTCGATTTAACCCTAGCCCAGGAGGAATGCTTGCAGAGGATACAGAGACGTATAGATGTTCCATATGATAGTTCTATAATTGAGCACCAGGATGCCCTTAGGGCTTTGTGGAATGCTGCGTTTCCTGAAGAAGAACTTCATGGCTTGATATCTGAGCAATGGAAGGAAATGGGCTGGCAAGGAAAAGATCCATCAACAGATTTTAGGGGTGGTGGTTTTATATCATTGGAGAATTTTCTCTTCTTTGCTAGGAATTTCCCGAAATCCTTCCAGGTTCTTTTACGCAAGCAGGAAGGAGATCGATCAGTGTGGGAATACCCATTTGCAGTTGCTGGTGTTAACATCACATACATGCTGATACAAATGCTTGATCTTGAAGCAGTCAAGCCACGCAATCTGGTTGGAGCAACTTTTCTAAAATTTCTTGCAGAAAATGGGTCAGCTTTTGATCTTCTCTATTGCATAACTTTCAAGCTAATGGATCATCAATGGCTTACTATGCGTGCCTCATACATGGATTTTAATGCAGTGATGAAAGAAACACGACGTCAGCTAGAGAAAGAGCTTCTCATTGAAGACATAGCCCGGCTTGAAGATTTACCCTCATACAAATTACTTTCCCGATAA

>Glyma.03g109400.3 sequence-type=CDS polypeptide=Glyma.03g109400.3.p locus=Glyma.03g109400 ID=Glyma.03g109400.3.Wm82.a2.v1 annot-version=Wm82.a2.v1
ATGTTTGCTGCTATTCTTAATTGCATTGCAGAGGTTGTGGCAGGGTCAGCTGCATGGCTAGGTCGAGGTCTGTCTTGTGTCTGTGTACAAAGAAGAGATAGTGATGTTTCTAACACTTTCGATTTAACCCTAGCCCAGGAGGAATGCTTGCAGAGGATACAGAGACGTATAGATGTTCCATATGATAGTTCTATAATTGAGCACCAGGATGCCCTTAGGGCTTTGTGGAATGCTGCGTTTCCTGAAGAAGAACTTCATGGCTTGATATCTGAGCAATGGAAGGAAATGGGCTGGCAAGGAAAAGATCCATCAACAGATTTTAGGGGTGGTGGTTTTATATCATTGGAGAATTTTCTCTTCTTTGCTAGGAATTTCCCGAAATCCTTCCAGGTTCTTTTACGCAAGCAGGAAGGAGATCGATCAGTGTGGGAATACCCATTTGCAGTTGCTGGTGTTAACATCACATACATGCTGATACAAATGCTTGATCTTGAAGCAGTCAAGCCACGCAATCTGGTTGGAGCAACTTTTCTAAAATTTCTTGCAGAAAATGGGTCAGCTTTTGATCTTCTCTATTGCATAACTTTCAAGCTAATGGATCATCAATGGCTTACTATGCGTGCCTCATACATGGATTTTAATGCAGTGATGAAAGAAACACGACGTCAGCTAGAGAAAGAGCTTCTCATTGAAGACATAGCCCGGCTTGAAGATTTACCCTCATACAAATTACTTTCCCGATAA

>Glyma.03g109400.4 sequence-type=CDS polypeptide=Glyma.03g109400.4.p locus=Glyma.03g109400 ID=Glyma.03g109400.4.Wm82.a2.v1 annot-version=Wm82.a2.v1
ATGTTTGCTGCTATTCTTAATTGCATTGAGGTTGTGGCAGGGTCAGCTGCATGGCTAGGTCGAGGTCTGTCTTGTGTCTGTGTACAAAGAAGAGATAGTGATGTTTCTAACACTTTCGATTTAACCCTAGCCCAGGAGGAATGCTTGCAGAGGATACAGAGACGTATAGATGTTCCATATGATAGTTCTATAATTGAGCACCAGGATGCCCTTAGGGCTTTGTGGAATGCTGCGTTTCCTGAAGAAGAACTTCATGGCTTGATATCTGAGCAATGGAAGGAAATGGGCTGGCAAGGAAAAGATCCATCAACAGATTTTAGGGGTGGTGGTTTTATATCATTGGAGAATTTTCTCTTCTTTGCTAGGAATTTCCCGAAATCCTTCCAGGTTCTTTTACGCAAGCAGGAAGGAGATCGATCAGTGTGGGAATACCCATTTGCAGTTGCTGGTGTTAACATCACATACATGCTGATACAAATGCTTGATCTTGAAGCAGTCAAGCCACGCAATCTGGTTGGAGCAACTTTTCTAAAATTTCTTGCAGAAAATGGGTCAGCTTTTGATCTTCTCTATTGCATAACTTTCAAGCTAATGGATCATCAATGGCTTACTATGCGTGCCTCATACATGGATTTTAATGCAGTGATGAAAGAAACACGACGTCAGCTAGAGAAAGAGCTTCTCATTGAAGACATAGCCCGGCTTGAAGATTTACCCTCATACAAATTACTTTCCCGATAA

Predicted protein sequences of Glyma.03G109400

Limit To All Plant Sequences

>Glyma.03g109400.1.p sequence-type=predicted peptide transcript=Glyma.03g109400.1 locus=Glyma.03g109400 ID=Glyma.03g109400.1.Wm82.a2.v1 annot-version=Wm82.a2.v1
MDDRGSSFVAVRRIPQGETCHPNSAEVVAGSAAWLGRGLSCVCVQRRDSDVSNTFDLTLAQEECLQRIQRRIDVPYDSSIIEHQDALRALWNAAFPEEELHGLISEQWKEMGWQGKDPSTDFRGGGFISLENFLFFARNFPKSFQVLLRKQEGDRSVWEYPFAVAGVNITYMLIQMLDLEAVKPRNLVGATFLKFLAENGSAFDLLYCITFKLMDHQWLTMRASYMDFNAVMKETRRQLEKELLIEDIARLEDLPSYKLLSR*

>Glyma.03g109400.2.p sequence-type=predicted peptide transcript=Glyma.03g109400.2 locus=Glyma.03g109400 ID=Glyma.03g109400.2.Wm82.a2.v1 annot-version=Wm82.a2.v1
MDDRGSSFVAVRRIPQGETCHPNSEVVAGSAAWLGRGLSCVCVQRRDSDVSNTFDLTLAQEECLQRIQRRIDVPYDSSIIEHQDALRALWNAAFPEEELHGLISEQWKEMGWQGKDPSTDFRGGGFISLENFLFFARNFPKSFQVLLRKQEGDRSVWEYPFAVAGVNITYMLIQMLDLEAVKPRNLVGATFLKFLAENGSAFDLLYCITFKLMDHQWLTMRASYMDFNAVMKETRRQLEKELLIEDIARLEDLPSYKLLSR*

>Glyma.03g109400.3.p sequence-type=predicted peptide transcript=Glyma.03g109400.3 locus=Glyma.03g109400 ID=Glyma.03g109400.3.Wm82.a2.v1 annot-version=Wm82.a2.v1
MFAAILNCIAEVVAGSAAWLGRGLSCVCVQRRDSDVSNTFDLTLAQEECLQRIQRRIDVPYDSSIIEHQDALRALWNAAFPEEELHGLISEQWKEMGWQGKDPSTDFRGGGFISLENFLFFARNFPKSFQVLLRKQEGDRSVWEYPFAVAGVNITYMLIQMLDLEAVKPRNLVGATFLKFLAENGSAFDLLYCITFKLMDHQWLTMRASYMDFNAVMKETRRQLEKELLIEDIARLEDLPSYKLLSR*

>Glyma.03g109400.4.p sequence-type=predicted peptide transcript=Glyma.03g109400.4 locus=Glyma.03g109400 ID=Glyma.03g109400.4.Wm82.a2.v1 annot-version=Wm82.a2.v1
MFAAILNCIEVVAGSAAWLGRGLSCVCVQRRDSDVSNTFDLTLAQEECLQRIQRRIDVPYDSSIIEHQDALRALWNAAFPEEELHGLISEQWKEMGWQGKDPSTDFRGGGFISLENFLFFARNFPKSFQVLLRKQEGDRSVWEYPFAVAGVNITYMLIQMLDLEAVKPRNLVGATFLKFLAENGSAFDLLYCITFKLMDHQWLTMRASYMDFNAVMKETRRQLEKELLIEDIARLEDLPSYKLLSR*

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