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Integrating Genetics and Genomics to Advance Soybean Research
SoyBase
SoyBase transitions to NEW site on 10/1/2024
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A previous version of this gene model can be found here:
| Database ID | Annotation Type | Annotation Description | Annotation Source | Match Score | Evidence Code |
|---|---|---|---|---|---|
| AT4G16970.1 | AT | Protein kinase superfamily protein | JGI | N/A | IEA |
| GO:0000727 | GO-bp | double-strand break repair via break-induced replication | EnsemblGenomes | N/A | IEA |
| GO:0006270 | GO-bp | DNA replication initiation | EnsemblGenomes | N/A | IEA |
| GO:0006468 | GO-bp | protein phosphorylation | EnsemblGenomes | N/A | IEA |
| GO:0006468 | GO-bp | protein phosphorylation | JGI | N/A | IEA |
| GO:0006909 | GO-bp | phagocytosis | EnsemblGenomes | N/A | IEA |
| GO:0008360 | GO-bp | regulation of cell shape | EnsemblGenomes | N/A | IEA |
| GO:0018105 | GO-bp | peptidyl-serine phosphorylation | EnsemblGenomes | N/A | IEA |
| GO:0005634 | GO-cc | nucleus | EnsemblGenomes | N/A | IEA |
| GO:0005737 | GO-cc | cytoplasm | EnsemblGenomes | N/A | IEA |
| GO:0004672 | GO-mf | protein kinase activity | EnsemblGenomes | N/A | IEA |
| GO:0004672 | GO-mf | protein kinase activity | JGI | N/A | IEA |
| GO:0004674 | GO-mf | protein serine/threonine kinase activity | EnsemblGenomes | N/A | IEA |
| GO:0005524 | GO-mf | ATP binding | EnsemblGenomes | N/A | IEA |
| GO:0005524 | GO-mf | ATP binding | JGI | N/A | IEA |
| KOG0658 | KOG | Glycogen synthase kinase-3 | JGI | N/A | IEA |
| PTHR11909 | Panther | CASEIN KINASE-RELATED | JGI | N/A | IEA |
| PTHR11909:SF48 | Panther | JGI | N/A | IEA | |
| PF00069 | PFAM | Protein kinase domain | JGI | N/A | IEA |
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Glyma.03G109300 not represented in the dataset |
Glyma.03G109300 not represented in the dataset |
| Libault et al. 2010, Plant Phys 152(2):541-552. Complete Transcriptome of the Soybean Root Hair Cell, a Single-Cell Model, and Its Alteration in Response to Bradyrhizobium japonicum Infection |
Severin et al. 2010, BMC Plant Biology 10:160 RNA-Seq Atlas of Glycine max: A guide to the soybean transcriptome |
Gene families from Phytozome are displayed using the PhyloTree viewer developed by LIS.
Gene information in GlycineMine developed by LIS.
Gene families from PhyloGenes.
| Corresponding Name | Annotation Version | Evidence | Comments |
|---|---|---|---|
| Glyma.03g109300 | Wm82.a4.v1 | ISS | As supplied by JGI |
| Glyma03g25801 | Wm82.a1.v1.1 | IGC | As supplied by JGI |
>Glyma.03g109300.1 sequence-type=CDS polypeptide=Glyma.03g109300.1.p locus=Glyma.03g109300 ID=Glyma.03g109300.1.Wm82.a2.v1 annot-version=Wm82.a2.v1 ATGGCAGAGTCCGAATTCGAACCAAACCGAGTCCATGACCTCGAAGAGAAATCGTGGCACCTCCTCGCGCTCCTCTTCCGAATCGGCCACGCCGTTTACCCGCAACGCCTCGCCGCGCAGTGCCGTTTGTTCGCCGCCTCGCCTGACTTCGTCTGCTACGTCAGCACTCTCCCCGGCTCGCCGCTCTCCGTCACCGACAACGGGCTCGTCACGCCCTCCGTCAGCGCCGTCTTCGCCCTCGGAAGCTTCTTCTCCCTCCGCTTCTCGCCGCCGCAGACGCACCGTTTCAGGAAACGCAAGTTGCTTTTCGATTCCGCCGAAGATGGAAGAGAGCGCAAGAGGTTAGCGATTCGTCATGGACTTCGAGAATTTTCGTTCCAGAGTTTTGCTGATGCTGCAGAGGCTCTGATGAGAAGCAATTTCCCTGTAATAAAATTTGAATCACAGAATATAGGTAGTGGAAATTTTGTATTCCTCTTGCGTATTGATAAAAATGAAGAGTGTTCTGGTTGTCCAATGTCAAATTTTGAACATCGGGGAGCCAATAATGATGCCAGCACAACCATGTCTAATGGAGAGGTTTCTAAATCTATTATCGAAGTGCTGACCAAAAAAATATCCATTATCAAAACAAGTTACTTGAACTGTCCGAAGCTAGTGGACAAAAATAGATTCATGGAATGCAATCTCTTTGTTGTGGATCCCCCATGCAAAGAGGGAATAGTTAACAACCTTGGAATTGGGAAGAAAATAGATTATTTTGACACATTTACGCATGACTGTGCTGAACAAAACAGTATTCATCATGTGGATGAAGATGGTATTGGTAAAAGTAATACTTGCAAAGATCAACCAAGAGAACCAAATGAAGATGATGAGGTGGAAAGTGGTTCAAAGAAAGGGCTGATTGATTCTGGCACAAATAGAGTCAAGGAAGATGTTGCTCAGAGGGTCAATGCTGCACTATGTGGAGAAGCATTGACTAATGGTTTGGAACAAAAGAACCATGTCCATGCAATGAATTTGGAAAAGGAGAGTGAGAGAAACACAGGGACTAAGTCTACTAATAAAATATCAAATTCCTCTTCAACTCCTAAGCGACCTTTGAAATCTTCTAGCATATTAAAGGGAGGACAGAAGAATGATCTCCACCCCAAGTCACAAATTCTTAAAGAGTCATTAGTCAGTAATAAATTTGGTAATGTTCCAAAAAATGTTGATCAACGTAAAAATGAACAGAATCTTACAGCAAGGAAGCAAAATCATAAAGAGAACATGGCTGGAAATATTGCCACTACTACTAAGGTGGAGAAAAGAGCATATCCATCATTTGAAGCTTTTACAATAGAGGAAGAAGAAGGTTCAGGTGGTTATGGCACCGTTTACCGTGCTCAAAGAACTACTGATGGAAAACGGGTTGCAATAAAATGTCCTCATACTAATGCTCATAAAAACCATGTAAATAATGAACGGAGTATGCTCGAGCGTTTTGGTGGTAAAAACTATATAATAAGGTATGAGGGCTCTTTTAAAAATGGCAACAGCGACTGCTTTGTTTTAGAACATGTTCACCATGATAGACCTGAGGTTTTGAAAAAAGAAATTGATATAGTTCAGCTTCAATGGTACGGGTATTGCATGTTCAGGGCCCTTTATTGCTTGCACAAAGAGGGAGTTGTTCACAGAGACATTAAACCTGGAAACTTCCTTTTCTCTCGAAAGCTAAGCAAAGGCTATCTTATTGATTTTAACCTTGCCATGGATTTAAAGCAGAAGCACAACATCGGAAGTAAATCTAAACCAAGCCATGATGCAGCATCCAATATTGTTTCTTTCTCTTCTGGTTCTGCCCCTCTGGTCCGAGACAAGAACCTTGGAGGCAGCAAGTCTTTAACATCCAATAAAAGGGCTTTGGCAGATTATAAGAATTATTCTGAACTTAATAGGCATGTAAAGCAAAAGGATTGTACCGGTCCTCTGAAAAATTGTCCTGATAAGGCTGGTGGGAGTTTTCTTAGAGCACAAGGAACAGATGGCTCTGGTGTAACTTCTGCGAAAGATCCTAGCACTAGGACTGCTTCTGCAGAGAGGCTCAGGGAACCTTTACCTTCCCATGGAAGAAAGGAGCTTATCAGCTTTGTGAATACCATGAAATGTGCAAACAACAGTTCAACAATAGGCCCTTCTTCACAAAGGAAAAGGGTTACTGCTCCCTCAAGCAAGGTAGATGGCAAGATTTTTAATATTACTCCGATGCCTTTGCATTCATCTACTGTTGGTGGGGGATTAATGAGAAGCAAAGGTGATGGAAAGAAAAAAGAAGGTTCATGTGTTGGAACCAAAGGATTCCGTGCTCCGGAGGTTTTGTTAAGGTCTCAGCATCAGGGACATAAGATTGATATTTGGTCAGCTGGAGTCACTCTACTCTACATGGTGATCGGGAAGACTCCTTTCACTGGCGACCCAGAACAGAATATAAAAGAAATTGTTAAATTGCGGGGCAGTGAAGAGTTTTGGGAAGTGGCCAAGCTACATGACCGTGAATTATCTTTTCCAGTGGAGTTACTTGATGACCGATACTTACAGTCATGGGACTTAGAAGGCTGGTGCAAGATTCACACAAAGAGACCAGAGTTTCTTGAGCAGATCCCGAAATCGCTGTTTGATTTGATAGACAAGTGTCTAACAGTTAACCCAAGAAATAGGCTCAGTGCTGAAGATGTTCTAAGGCATGAATTCTTTGACTCACTGCATGAGTCCCTGAGGAAGCAAAGGATGCTTCATCGACATCGAGCTCTCAGGTCGGATGCAGCAGCTTCCAGAGCAATCTGA
>Glyma.03g109300.1.p sequence-type=predicted peptide transcript=Glyma.03g109300.1 locus=Glyma.03g109300 ID=Glyma.03g109300.1.Wm82.a2.v1 annot-version=Wm82.a2.v1 MAESEFEPNRVHDLEEKSWHLLALLFRIGHAVYPQRLAAQCRLFAASPDFVCYVSTLPGSPLSVTDNGLVTPSVSAVFALGSFFSLRFSPPQTHRFRKRKLLFDSAEDGRERKRLAIRHGLREFSFQSFADAAEALMRSNFPVIKFESQNIGSGNFVFLLRIDKNEECSGCPMSNFEHRGANNDASTTMSNGEVSKSIIEVLTKKISIIKTSYLNCPKLVDKNRFMECNLFVVDPPCKEGIVNNLGIGKKIDYFDTFTHDCAEQNSIHHVDEDGIGKSNTCKDQPREPNEDDEVESGSKKGLIDSGTNRVKEDVAQRVNAALCGEALTNGLEQKNHVHAMNLEKESERNTGTKSTNKISNSSSTPKRPLKSSSILKGGQKNDLHPKSQILKESLVSNKFGNVPKNVDQRKNEQNLTARKQNHKENMAGNIATTTKVEKRAYPSFEAFTIEEEEGSGGYGTVYRAQRTTDGKRVAIKCPHTNAHKNHVNNERSMLERFGGKNYIIRYEGSFKNGNSDCFVLEHVHHDRPEVLKKEIDIVQLQWYGYCMFRALYCLHKEGVVHRDIKPGNFLFSRKLSKGYLIDFNLAMDLKQKHNIGSKSKPSHDAASNIVSFSSGSAPLVRDKNLGGSKSLTSNKRALADYKNYSELNRHVKQKDCTGPLKNCPDKAGGSFLRAQGTDGSGVTSAKDPSTRTASAERLREPLPSHGRKELISFVNTMKCANNSSTIGPSSQRKRVTAPSSKVDGKIFNITPMPLHSSTVGGGLMRSKGDGKKKEGSCVGTKGFRAPEVLLRSQHQGHKIDIWSAGVTLLYMVIGKTPFTGDPEQNIKEIVKLRGSEEFWEVAKLHDRELSFPVELLDDRYLQSWDLEGWCKIHTKRPEFLEQIPKSLFDLIDKCLTVNPRNRLSAEDVLRHEFFDSLHESLRKQRMLHRHRALRSDAAASRAI*
| Funded by the USDA-ARS. Developed by the USDA-ARS SoyBase and Legume Clade Database group at the Iowa State University, Ames, IA | ||
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