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Integrating Genetics and Genomics to Advance Soybean Research
SoyBase
SoyBase transitions to NEW site on 10/1/2024
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A previous version of this gene model can be found here:
| Database ID | Annotation Type | Annotation Description | Annotation Source | Match Score | Evidence Code |
|---|---|---|---|---|---|
| AT4G13070.1 | AT | RNA-binding CRS1 / YhbY (CRM) domain protein | JGI | N/A | IEA |
| GO:0006298 | GO-bp | mismatch repair | EnsemblGenomes | N/A | IEA |
| GO:0051026 | GO-bp | chiasma assembly | EnsemblGenomes | N/A | IEA |
| GO:0000795 | GO-cc | synaptonemal complex | EnsemblGenomes | N/A | IEA |
| GO:0016020 | GO-cc | membrane | EnsemblGenomes | N/A | IEA |
| GO:0016021 | GO-cc | integral component of membrane | EnsemblGenomes | N/A | IEA |
| GO:0003723 | GO-mf | RNA binding | EnsemblGenomes | N/A | IEA |
| GO:0003723 | GO-mf | RNA binding | JGI | N/A | IEA |
| GO:0008094 | GO-mf | DNA-dependent ATPase activity | EnsemblGenomes | N/A | IEA |
| GO:0030983 | GO-mf | mismatched DNA binding | EnsemblGenomes | N/A | IEA |
| PTHR11361 | Panther | DNA MISMATCH REPAIR MUTS RELATED PROTEINS | JGI | N/A | IEA |
| PTHR11361:SF36 | Panther | JGI | N/A | IEA | |
| PF01985 | PFAM | CRS1 / YhbY (CRM) domain | JGI | N/A | IEA |
| PF09737 | PFAM | De-etiolated protein 1 Det1 | JGI | N/A | IEA |
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Glyma.03G073000 not represented in the dataset |
Glyma.03G073000 not represented in the dataset |
| Libault et al. 2010, Plant Phys 152(2):541-552. Complete Transcriptome of the Soybean Root Hair Cell, a Single-Cell Model, and Its Alteration in Response to Bradyrhizobium japonicum Infection |
Severin et al. 2010, BMC Plant Biology 10:160 RNA-Seq Atlas of Glycine max: A guide to the soybean transcriptome |
Gene families from Phytozome are displayed using the PhyloTree viewer developed by LIS.
Gene information in GlycineMine developed by LIS.
Gene families from PhyloGenes.
>Glyma.03g073000.1 sequence-type=CDS polypeptide=Glyma.03g073000.1.p locus=Glyma.03g073000 ID=Glyma.03g073000.1.Wm82.a2.v1 annot-version=Wm82.a2.v1 ATGGCATTAGATGCAAATGGGAGGAGACTCTTGAGATCAAATATCTTTGGAAGCCATGATATTCTGGGAAGCTGGCTCCCTGCCAGATACATAAGTAATGAATCAGTTGAGCTGAAGACTCACAATGATGTCATACGGTTCTCTCTAGGCAAGTCTGATGATATTAATAATGCAAAGAAGAGCCAGCTGAACAAAAAATTTAAAATCTCTAGAAAGGCTAAACTAAATGAGCTGAAGTGCTATCGTTTGAAGGCCAAGAAAAAGATGAATTCCCCAAATCCAGAAGTTAGAATTAGATATAAGCTTGAAAAGGCCAAGCGAAAGGAAACTTGGTTGATTGAGAAGCTACAGAAATTTGATGTACCAAAACCCCCTCCAGAAACATATGATCCTGAAATTTTAACTGAGGAGGAGAGGCATTACATGAAGCGCACTGTTGGGAGACGAGGAGTGTTTGGTGGGGTAGTTCTTAATATGCATCTTCACTGGAAAAATCATGAAACGGTAAAGGTTATCTGCAAGCCTTGCAAACCAGGGCAAGTTCATGAATATGCTGAAGAGCTTGCTCGACTAAGCAAAGGCATTGTGATTGACATCAAGCCCAATAATACTATCATTTTTTACCGTGGAAAGAACTATGTAAAACCAGAAGTAATGTCACCTCCAAATACATTATCAAAAGCGAAGAATTCACCAGACGAGCTTTATCTGTTGTTTCAGCAGTTCTGTGACCACTTCCATGCAACATCAAGGAATTCAATGTATATGAATTTCATATCTTCTCATTCAAATAATATCCACGCACTGGAACAGCTCCGGAGCATTAAAGATAAGGCAAGCAGCTCTGCACAGATAAAAGAAAAAACAAAAGACAATAAAAAAATTACAGAACTTATGGATGACATTCGTGAGAATGTCTCTGTGTTGACACTGCTTGCTGAGGTCTTGTGCTTGCTGGATATGATTGTAAATTCATTTGCTCATATGATATCAACTAAGCCTGTTGATCGATATACAAGACCAGAATTTACAGAGAATGGGCCGTTGGCAATTGATTCTAAACAGGCTATTAATCATATTAAGAGGAAGTATGAGTTGGAGAATATGGAAATTGTGAACAAGGAAAAAGAAAAGGTTCGATATGATTTCCTGGTTGACAAAGCCATTGCAGAAATTGAGGCAAAGTGTGGCCAAAAAATTGAAGAATGCAAAGAAGAACAAAGGCAGCAGTTGATGCGCATTGAAGATGAACACACGTTGCTCGTTACTCAAATGAAGCAGGAGCATGACAAGAGGCAAGCAAGCCTCATAGCTGAACACAACGAACAGCTAAAGCGTACCCAACTTAACTGTTCCCTGGAATTCTATAATTTGTTGTCTCAGACTCTCAGTCATAACCGTCATAAAAAGCAATTGCGTTTCAACGACGTTATATACAATGACGGTTTACAACCGTCGTTAAAAGCACTTAATAACCGTCGTAAAAAGCCATTTTTCTAG
>Glyma.03g073000.1.p sequence-type=predicted peptide transcript=Glyma.03g073000.1 locus=Glyma.03g073000 ID=Glyma.03g073000.1.Wm82.a2.v1 annot-version=Wm82.a2.v1 MALDANGRRLLRSNIFGSHDILGSWLPARYISNESVELKTHNDVIRFSLGKSDDINNAKKSQLNKKFKISRKAKLNELKCYRLKAKKKMNSPNPEVRIRYKLEKAKRKETWLIEKLQKFDVPKPPPETYDPEILTEEERHYMKRTVGRRGVFGGVVLNMHLHWKNHETVKVICKPCKPGQVHEYAEELARLSKGIVIDIKPNNTIIFYRGKNYVKPEVMSPPNTLSKAKNSPDELYLLFQQFCDHFHATSRNSMYMNFISSHSNNIHALEQLRSIKDKASSSAQIKEKTKDNKKITELMDDIRENVSVLTLLAEVLCLLDMIVNSFAHMISTKPVDRYTRPEFTENGPLAIDSKQAINHIKRKYELENMEIVNKEKEKVRYDFLVDKAIAEIEAKCGQKIEECKEEQRQQLMRIEDEHTLLVTQMKQEHDKRQASLIAEHNEQLKRTQLNCSLEFYNLLSQTLSHNRHKKQLRFNDVIYNDGLQPSLKALNNRRKKPFF*
| Funded by the USDA-ARS. Developed by the USDA-ARS SoyBase and Legume Clade Database group at the Iowa State University, Ames, IA | ||
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