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Report for Sequence Feature Glyma.03G061000

Feature Type:gene_model
Chromosome:Gm03
Start:9049358
stop:9051509
Source:JGI
Version:Wm82.a2.v1
High confidence:yes



A previous version of this gene model can be found here:

Annotations for Glyma.03G061000
Database IDAnnotation TypeAnnotation DescriptionAnnotation SourceMatch ScoreEvidence Code
AT2G45270.1AT glycoprotease 1 JGI N/AIEA
GO:0002949GO-bp tRNA threonylcarbamoyladenosine modification EnsemblGenomesN/AIEA
GO:0006508GO-bp proteolysis EnsemblGenomesN/AIEA
GO:0009793GO-bp embryo development ending in seed dormancy EnsemblGenomesN/AIEA
GO:0005743GO-cc mitochondrial inner membrane EnsemblGenomesN/AIEA
GO:0004222GO-mf metalloendopeptidase activity EnsemblGenomesN/AIEA
PTHR11735Panther O-SIALOGLYCOPROTEIN ENDOPEPTIDASE JGI N/AIEA
PF00814PFAM Glycoprotease family JGI N/AIEA
GN7V-65396SoyCyc9-rxn Enzyme name not determined Plant Metabolic Network ISS

Expression Patterns of Glyma.03G061000
Gene expression representations made with eFP at the University of Toronto.
Waese et al. 2017, Plant Cell 29(8):1806-1821 ePlant: Visualizing and Exploring Multiple Levels of Data for Hypothesis Generation in Plant Biology

Glyma.03G061000 not represented in the dataset
Glyma.03G061000 not represented in the dataset
Libault et al. 2010, Plant Phys 152(2):541-552.
Complete Transcriptome of the Soybean Root Hair Cell, a Single-Cell Model, and Its Alteration in Response to Bradyrhizobium japonicum Infection 		Severin et al. 2010, BMC Plant Biology 10:160
RNA-Seq Atlas of Glycine max: A guide to the soybean transcriptome

To see more experiments click HERE

Related Legume Genes

View a gene family containing related genes from other legumes at LIS

Gene families from Phytozome are displayed using the PhyloTree viewer developed by LIS.


View gene and ortholog information at GlycineMine

Gene information in GlycineMine developed by LIS.


Related Plant Genes

View a gene family containing related genes from other plant species at PhyloGenes

Gene families from PhyloGenes.



Coding sequences of Glyma.03G061000
>Glyma.03g061000.1 sequence-type=CDS polypeptide=Glyma.03g061000.1.p locus=Glyma.03g061000 ID=Glyma.03g061000.1.Wm82.a2.v1 annot-version=Wm82.a2.v1
ATGGGTACTTCAGAGTTCAACCACGACACATGGAAAGAGAAAGAGAGAGAATTGGTATTTTACTTAAAGGGAACAAATGTGGAACAGGGGAAGCACAAAAGCATTTCAATGAAATCAAAAACCATAAAACCAGGCAAGCATCAACGGGGAAACAACAGAGGCGAGAGAGAAACCAAAAGCAACAAAACCAAAAGTAGCAAGCAACAAAGGGGGAAACGGAGGCGAGAAAAATGCAAGCAGCAACATGGAGCAGATAAGAAAACTCAGGAAAGAAAGAAGGGCCTACCTGCAAAGGGGGAAACGGAGGCGGCGAGCAGCAATGGAGGTTCGCTTGCGATGAGGAGAAGACGTGCAGAAACGGCAGACCTGCTTGCAAAACATGGAGGTGTTGCTCCAAAAATGGCAGAAGAAGCTCACTCAAAAGTTATAGACCAGGTTGTGCAAGATGCCCTTGATAAAGCTTATCTGACCGAGAAGGATCTTACTGCTGTTGCTGTTACTATTGGTCCTGGTTTGAGTCTCTGCCTTCGTGTGGAGGTGCAGAAAGCCCCGGAGAATTGCTGGCAGATTTAA
Predicted protein sequences of Glyma.03G061000
>Glyma.03g061000.1.p sequence-type=predicted peptide transcript=Glyma.03g061000.1 locus=Glyma.03g061000 ID=Glyma.03g061000.1.Wm82.a2.v1 annot-version=Wm82.a2.v1
MGTSEFNHDTWKEKERELVFYLKGTNVEQGKHKSISMKSKTIKPGKHQRGNNRGERETKSNKTKSSKQQRGKRRREKCKQQHGADKKTQERKKGLPAKGETEAASSNGGSLAMRRRRAETADLLAKHGGVAPKMAEEAHSKVIDQVVQDALDKAYLTEKDLTAVAVTIGPGLSLCLRVEVQKAPENCWQI*






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