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Report for Sequence Feature Glyma.03G047400

Feature Type:gene_model
Chromosome:Gm03
Start:6002202
stop:6005473
Source:JGI
Version:Wm82.a2.v1
High confidence:yes



A previous version of this gene model can be found here:

Annotations for Glyma.03G047400
Database IDAnnotation TypeAnnotation DescriptionAnnotation SourceMatch ScoreEvidence Code
AT5G46490.2AT Disease resistance protein (TIR-NBS-LRR class) family JGI N/AIEA
GO:0006952GO-bp defense response EnsemblGenomesN/AIEA
GO:0015074GO-bp DNA integration EnsemblGenomesN/AIEA
GO:0003676GO-mf nucleic acid binding EnsemblGenomesN/AIEA
GO:0005515GO-mf protein binding JGI N/AIEA
GO:0043531GO-mf ADP binding EnsemblGenomesN/AIEA
GO:0043531GO-mf ADP binding JGI N/AIEA
PTHR11017Panther LEUCINE-RICH REPEAT-CONTAINING PROTEIN JGI N/AIEA
PTHR11017:SF20Panther DISEASE RESISTANCE PROTEIN RPS4-RELATED JGI N/AIEA
PF00560PFAM Leucine Rich Repeat JGI N/AIEA
PF00931PFAM NB-ARC domain JGI N/AIEA
PF07727PFAM Reverse transcriptase (RNA-dependent DNA polymerase) JGI N/AIEA

Expression Patterns of Glyma.03G047400
Gene expression representations made with eFP at the University of Toronto.
Waese et al. 2017, Plant Cell 29(8):1806-1821 ePlant: Visualizing and Exploring Multiple Levels of Data for Hypothesis Generation in Plant Biology

Glyma.03G047400 not represented in the dataset
Glyma.03G047400 not represented in the dataset
Libault et al. 2010, Plant Phys 152(2):541-552.
Complete Transcriptome of the Soybean Root Hair Cell, a Single-Cell Model, and Its Alteration in Response to Bradyrhizobium japonicum Infection 		Severin et al. 2010, BMC Plant Biology 10:160
RNA-Seq Atlas of Glycine max: A guide to the soybean transcriptome

To see more experiments click HERE

Related Legume Genes

View a gene family containing related genes from other legumes at LIS

Gene families from Phytozome are displayed using the PhyloTree viewer developed by LIS.


View gene and ortholog information at GlycineMine

Gene information in GlycineMine developed by LIS.


Related Plant Genes

View a gene family containing related genes from other plant species at PhyloGenes

Gene families from PhyloGenes.



Coding sequences of Glyma.03G047400
>Glyma.03g047400.1 sequence-type=CDS polypeptide=Glyma.03g047400.1.p locus=Glyma.03g047400 ID=Glyma.03g047400.1.Wm82.a2.v1 annot-version=Wm82.a2.v1
ATGAAAGATGCTTTTGAAATGACAGACCTTGGAAGGATGACATTCTTTCTTAGTATGCAGGTGTATCAAAAACAGAATGAAATATTTCTTTGCCAGGAAAAATATGCAAATGAAGTTCTCAAGAAGTTTAACATGGCTGGGTGCAAACCAGCTGCAACTCCAATGAATCAAAAGGAGAAGTTTTGCAAAGAAGATGGAGCTGAAAAAGTGGATGAAAAGTTGTATAGGAGCCTTATAGGCTGCGTAATGTATTTAAGTGCATCAAGGCCTGACATCTTGCATGCAGTAAGCTTGTTATCAAGGGAACTGAACTCTAGTGAAGCACTTGAGCTTTTGAGTTTGTATGCCTTTAACCAAAATCATCTTGATATGGAGTATTATAAGCTATTAAAGAGGGTGGTCAACTATTCCCAAGGCATACCATTAGTTGTTAAAGTTTTGGGTCATCTTTGTGAGAAAGATAAGGAAGTTTGGGAAAGTCAGCTAGACAAACTTAAGAACATGCCAAATATAGATATTTACAACGCAATGAGATTGAGTTATGATGATCTAGATCACAAAGAACAAAAGATTCTTTTAGATCTTGCATGTTTTTTCATGGGATTGAATATGAAAGTGGACCACATAAAAGTTTTATTGAAAGACAGTGAAAAAGATGATTCAGTGGCTGTTGGGTTAGAAAGGTTAAAAGATAAAGCTCTTATAACCATTTCTGAAGATAATGTTATATCTATGCACGATATCAAACAAGAAAAGGCTTCGGAGATTGTTCGTCTAGAATCAATTGTAGACCCTGGAAACCGTAGCCGATTGATGCATCCCGATGATACTTACGAAGTATTAAAATATAACAAGGGGACTGAGGCCATAAGAAGCATAAGGGCAGACTTGTCAGTAATTAGGAAGCTGCACAAATATAATCAAGATGGATTTCCTCTTCTTCCTTGCGGCCTTCAATCTTTCCCAGTTGAGCTAAGATATCTTGCTTGGATGCATTACCCTCTGAAATCCTTGGCAGAGAATTTTTCTGTGGAAAACCTGAATTTGGTGAATTTAAAAGAAGTTAAAGTCTCTGGTTCTGAAAACTTGAAGGAGCTGCCAGACCTTTCAGAAGCCACAAATCTTGAAGTGCTGGATATCAATTTTTGTCCTCAGTTGACTAGTGTGACTCCATCTATTTTCTCTCTCAACAGGCTTGAGAGATTGTCTGTAGCTTATTGTTCCCTTACAAAAATTACCAGCAAGAACCACCTAAGCTCCCTTAGATATCTCAACCTTGAGTCATGCAAAAAGCTAAGGGAATTTTCAGTGGCATCAGAGAATATGATTGAACTAGATTTATCATCCACTTGTGTCAATGCATTTACCTCATCTTTTGGATATTGCACAGCATTGAAGACTGTATTGTTTCCATCAGTTGCTCAACAATTCAACGAAAACAGAAAAGAAGTTCTGTTTTGGAATTGCTTGAAATTGGATGAAGATTCTCTCAAGGCTGTTAAACTAAATACACATATTAATTTGAGGAAATTTGCATACCAACATTTATCTGCACCAGATGAAAATTTTGATGATTATAATCGTACTTATGGATCTGATCAGGTAAAGTATGTGTATCCAGGAAGAAGCGTTCCAGAACTTACATTCTATATCACTGTGAGTGATGATGAGGATGAAAGTAAAAAGGATAGCATCAACATCTACATGTCCAACTCAATTGTCTGGGCTGCATCAGATCATGTGTGTGTGATTTATGACCAATGA
Predicted protein sequences of Glyma.03G047400
>Glyma.03g047400.1.p sequence-type=predicted peptide transcript=Glyma.03g047400.1 locus=Glyma.03g047400 ID=Glyma.03g047400.1.Wm82.a2.v1 annot-version=Wm82.a2.v1
MKDAFEMTDLGRMTFFLSMQVYQKQNEIFLCQEKYANEVLKKFNMAGCKPAATPMNQKEKFCKEDGAEKVDEKLYRSLIGCVMYLSASRPDILHAVSLLSRELNSSEALELLSLYAFNQNHLDMEYYKLLKRVVNYSQGIPLVVKVLGHLCEKDKEVWESQLDKLKNMPNIDIYNAMRLSYDDLDHKEQKILLDLACFFMGLNMKVDHIKVLLKDSEKDDSVAVGLERLKDKALITISEDNVISMHDIKQEKASEIVRLESIVDPGNRSRLMHPDDTYEVLKYNKGTEAIRSIRADLSVIRKLHKYNQDGFPLLPCGLQSFPVELRYLAWMHYPLKSLAENFSVENLNLVNLKEVKVSGSENLKELPDLSEATNLEVLDINFCPQLTSVTPSIFSLNRLERLSVAYCSLTKITSKNHLSSLRYLNLESCKKLREFSVASENMIELDLSSTCVNAFTSSFGYCTALKTVLFPSVAQQFNENRKEVLFWNCLKLDEDSLKAVKLNTHINLRKFAYQHLSAPDENFDDYNRTYGSDQVKYVYPGRSVPELTFYITVSDDEDESKKDSINIYMSNSIVWAASDHVCVIYDQ*






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