SoyBase SoyBase transitions to NEW site on 10/1/2024
Integrating Genetics and Genomics to Advance Soybean Research

Report for Sequence Feature Glyma.02g291600

Feature Type:gene_model
Chromosome:Gm02
Start:48910322
stop:48914297
Source:JGI
Version:Wm82.a4.v1
High confidence:yes



Annotations for Glyma.02g291600
Database IDAnnotation TypeAnnotation DescriptionAnnotation SourceMatch ScoreEvidence Code
AT1G28490.1AT ATSYP61,OSM1,SYP61 JGI N/AIEA
GO:0048193GO-bp Golgi vesicle transport JGI N/AIEA
GO:0016020GO-cc membrane JGI N/AIEA
GO:0005515GO-mf protein binding JGI N/AIEA
K08498KEGG Membrane trafficking JGI N/AIEA
KOG3202 KOG SNARE protein TLG1/Syntaxin 6 JGI N/AIEA
PTHR19957PantherFam SYNTAXIN JGI N/AIEA
PF05739Pfam SNARE domain JGI N/AIEA
PF09177Pfam Syntaxin 6, N-terminal JGI N/AIEA

Gene model name correspondences to Glyma.02g291600 Gene Call Version Wm82.a4.v1
Corresponding NameAnnotation VersionEvidenceComments
Glyma02g46110 Wm82.a1.v1.1IGC As supplied by JGI


Coding sequences of Glyma.02g291600
>Glyma.02g291600.1 sequence-type=CDS polypeptide=Glyma.02g291600.1.p locus=Glyma.02g291600 id=Glyma.02g291600.1.Wm82.a4.v1 annot-version=Wm82.a4.v1
ATGCCTTCGGCTCAAGATCCATTCTACGTTGTCAAGCAAGAAATTCAAGAATCTATTGATAAGCTAAAATCCACTTTTCACCAATGGGAAAACACTGCTGATGTTGGCGAGCGATCCAGTCTATCAAAGGAAGTTCTTGCTAGTTGTGAAAGCATTGCATGGCAGGTGGATGAATTGGACAAAGCAATTTCTGTGGCTGCTAGAGATCCTTCTTGGTATGGCATTGATGAAGTGGAGGTTGAAAACCGGAGGAAGTGGACCAGTGATGCTCGCACCCAGGTGAACAAAGCAAAGAGAACAGTGGAAGCTGGAAAGGGCTCAAACAATGCTAGTCTAAGTGGGATGCACAGGGAATTAATGAGGCTTCCTAGTTCTCATCAAACTACATCTAACCAATATGCTGCCCAGGATAATGATGATTTCATAGAGTCAGAATCAGACAGGCAGATGCTTCTTATTAAGAGACAAGATGAGGAGTTGGATGAGCTTAGTTTAAGTGTACAAAGAATTGGAGGTGTTGGACTTACTATACATGAAGAGCTCCTTGCGCAGGAAAAGATTATTGATGAACTTGGCAATGAGATGGACGGTACATCTAATCGCCTAGATTTTGTCCAGAAAAAAGTGGCAATGGTCATGAAGAAGGCTAGCGCAAAGGGCCAGATCATGATGATATTGGGTTTGTTGGCGATGTTTATTTTCCTCTTCATCTTGGTATTCTTCACCTAG
Predicted protein sequences of Glyma.02g291600
>Glyma.02g291600.1.p sequence-type=predicted peptide transcript=Glyma.02g291600.1 locus=Glyma.02g291600 id=Glyma.02g291600.1.p.Wm82.a4.v1 annot-version=Wm82.a4.v1
MPSAQDPFYVVKQEIQESIDKLKSTFHQWENTADVGERSSLSKEVLASCESIAWQVDELDKAISVAARDPSWYGIDEVEVENRRKWTSDARTQVNKAKRTVEAGKGSNNASLSGMHRELMRLPSSHQTTSNQYAAQDNDDFIESESDRQMLLIKRQDEELDELSLSVQRIGGVGLTIHEELLAQEKIIDELGNEMDGTSNRLDFVQKKVAMVMKKASAKGQIMMILGLLAMFIFLFILVFFT*






Funded by the USDA-ARS. Developed by the USDA-ARS SoyBase and Legume Clade Database group at the Iowa State University, Ames, IA
 
USDA Logo
Iowa State University Logo