SoyBase SoyBase transitions to NEW site on 10/1/2024
Integrating Genetics and Genomics to Advance Soybean Research

Report for Sequence Feature Glyma.02g279900

Feature Type:gene_model
Chromosome:Gm02
Start:48033527
stop:48035979
Source:JGI
Version:Wm82.a4.v1
High confidence:yes



Annotations for Glyma.02g279900
Database IDAnnotation TypeAnnotation DescriptionAnnotation SourceMatch ScoreEvidence Code
AT5G12300.1AT JGI N/AIEA
GO:0005515GO-mf protein binding JGI N/AIEA
PTHR31208PantherFam EXPRESSED PROTEIN JGI N/AIEA
PTHR31208:SF3PantherFam C2 DOMAIN-CONTAINING PROTEIN JGI N/AIEA
PF00168Pfam C2 domain JGI N/AIEA

Proteins Associated with Glyma.02g279900
LocusGene SymbolProtein Name
C2-18 C2 domain containing protein gene 18

Gene model name correspondences to Glyma.02g279900 Gene Call Version Wm82.a4.v1
Corresponding NameAnnotation VersionEvidenceComments
Glyma02g44850 Wm82.a1.v1.1IGC As supplied by JGI


Coding sequences of Glyma.02g279900
>Glyma.02g279900.1 sequence-type=CDS polypeptide=Glyma.02g279900.1.p locus=Glyma.02g279900 id=Glyma.02g279900.1.Wm82.a4.v1 annot-version=Wm82.a4.v1
ATGGATTCATTCAATCAGAGTGTTCAGAATTCCAGCTTCAGGTACAATCCAAATTTGAACACAAGGACACATGCAGATGAAGAAGCTGAGTTCTCAGGAATTCTTGATATCTTTGTCCATCATGCCAGGAATATTCATAACATATGCATCTATGACAACCAGGATGTCTATGCTAAGTTCTCTCTCACTTACAACCCTGATGAGACTCTCTCTACAAGAATCATCAATGGAGGTGGCAAAAACCCAACATTCAATGAAAACTTGAGGTTGAAGATCACCCAAATGAATGCTGTTCTGAAATGTGAAGTTTGGATGTTTAGTAGGTCAAGGATTCACATGGAAGACCAGCTTTTGGGGTTTGCTTTGGTCCCAATTTCACAAGTTGTTGGCAAAGGAAAGTTGACTGAAGATTACAGCCTTTCCTCCACTGATCTTTTCCACTCTCCTGCAGGAACTGTCCAACTAACACTGTCTTTGGACCCCTCTTTGGCAATCAACTCCTCAGTGAATTTGATACCTGAATCAGCAAAGAACTCATCAATATCATCAGAAGTTATTTTGCTTGATAGAAAGATCTCAGAAGTTATGTTGGATCCAGTTGAGTATGCTAGAATTGAATTTCCTGACATCAGTGTGGTGAAGGAGAATCAGCAAATGGTATCTGAGTACTTCAATTTGGCTTCTCAAGATACTAATTCTGCTCCTTCAAGGTCCAACATTGGAGGGTCACTACCATTTCTTCACCTTGGTGCATCTCCTCAACTTGATGATTATGAGATGACTATGATGAGCTCACCAGATGAGAATCATATAGGGCCCATTTCTCCAAATGAGAGCATTCAGAACTCTTGCTTCCCAGGTTCTACCATCACAACCTTGAGTAGTGATGATATAAACTCAGCAGATTCAGTTGAGAAAAAGAACCATTTGAGCACTGGTGACTCATCAAATTCTATCACTGTGTCAATCACTGTGGAAGGTACTCAAAACTGTGGTGCTGGTCCAGATACCCCAACTTCCAAGAAAGAAGAAGGTGAGGCCAGAGGTAACAAAGATGCAAACTTCTCAAGCAAGGAAAAGGAAAGCAAAAAAATCAATAATAACAACACAGAAGCTTCAAAGTTTGGTCAAGTTTATTCAGCTCCACTAGGGAACATCAATTTAGAAGCTGAGCAAGCTGCTATGCAAAAACAAATAGTGGACATGTATATGAGGAGCATGAAGCAGTTCACTGAGTCCTTGGCAAAAATGAAGCTACCAATGGACCTTGACAAACCTGAAAAAGTGGATCATGGTGATGTTGATGTGATTCAGAATCTTGACAACAGCAAATTAGAAATTGATAAGAAGAAAAAGGATGGATCACGTGTGTTTTATGGTAGTAGAGCATTCTTCTAA

>Glyma.02g279900.2 sequence-type=CDS polypeptide=Glyma.02g279900.2.p locus=Glyma.02g279900 id=Glyma.02g279900.2.Wm82.a4.v1 annot-version=Wm82.a4.v1
ATGGATTCATTCAATCAGAGTGTTCAGAATTCCAGCTTCAGGAATATTCATAACATATGCATCTATGACAACCAGGATGTCTATGCTAAGTTCTCTCTCACTTACAACCCTGATGAGACTCTCTCTACAAGAATCATCAATGGAGGTGGCAAAAACCCAACATTCAATGAAAACTTGAGGTTGAAGATCACCCAAATGAATGCTGTTCTGAAATGTGAAGTTTGGATGTTTAGTAGGTCAAGGATTCACATGGAAGACCAGCTTTTGGGGTTTGCTTTGGTCCCAATTTCACAAGTTGTTGGCAAAGGAAAGTTGACTGAAGATTACAGCCTTTCCTCCACTGATCTTTTCCACTCTCCTGCAGGAACTGTCCAACTAACACTGTCTTTGGACCCCTCTTTGGCAATCAACTCCTCAGTGAATTTGATACCTGAATCAGCAAAGAACTCATCAATATCATCAGAAGTTATTTTGCTTGATAGAAAGATCTCAGAAGTTATGTTGGATCCAGTTGAGTATGCTAGAATTGAATTTCCTGACATCAGTGTGGTGAAGGAGAATCAGCAAATGGTATCTGAGTACTTCAATTTGGCTTCTCAAGATACTAATTCTGCTCCTTCAAGGTCCAACATTGGAGGGTCACTACCATTTCTTCACCTTGGTGCATCTCCTCAACTTGATGATTATGAGATGACTATGATGAGCTCACCAGATGAGAATCATATAGGGCCCATTTCTCCAAATGAGAGCATTCAGAACTCTTGCTTCCCAGGTTCTACCATCACAACCTTGAGTAGTGATGATATAAACTCAGCAGATTCAGTTGAGAAAAAGAACCATTTGAGCACTGGTGACTCATCAAATTCTATCACTGTGTCAATCACTGTGGAAGGTACTCAAAACTGTGGTGCTGGTCCAGATACCCCAACTTCCAAGAAAGAAGAAGGTGAGGCCAGAGGTAACAAAGATGCAAACTTCTCAAGCAAGGAAAAGGAAAGCAAAAAAATCAATAATAACAACACAGAAGCTTCAAAGTTTGGTCAAGTTTATTCAGCTCCACTAGGGAACATCAATTTAGAAGCTGAGCAAGCTGCTATGCAAAAACAAATAGTGGACATGTATATGAGGAGCATGAAGCAGTTCACTGAGTCCTTGGCAAAAATGAAGCTACCAATGGACCTTGACAAACCTGAAAAAGTGGATCATGGTGATGTTGATGTGATTCAGAATCTTGACAACAGCAAATTAGAAATTGATAAGAAGAAAAAGGATGGATCACGTGTGTTTTATGGTAGTAGAGCATTCTTCTAA
Predicted protein sequences of Glyma.02g279900
>Glyma.02g279900.1.p sequence-type=predicted peptide transcript=Glyma.02g279900.1 locus=Glyma.02g279900 id=Glyma.02g279900.1.p.Wm82.a4.v1 annot-version=Wm82.a4.v1
MDSFNQSVQNSSFRYNPNLNTRTHADEEAEFSGILDIFVHHARNIHNICIYDNQDVYAKFSLTYNPDETLSTRIINGGGKNPTFNENLRLKITQMNAVLKCEVWMFSRSRIHMEDQLLGFALVPISQVVGKGKLTEDYSLSSTDLFHSPAGTVQLTLSLDPSLAINSSVNLIPESAKNSSISSEVILLDRKISEVMLDPVEYARIEFPDISVVKENQQMVSEYFNLASQDTNSAPSRSNIGGSLPFLHLGASPQLDDYEMTMMSSPDENHIGPISPNESIQNSCFPGSTITTLSSDDINSADSVEKKNHLSTGDSSNSITVSITVEGTQNCGAGPDTPTSKKEEGEARGNKDANFSSKEKESKKINNNNTEASKFGQVYSAPLGNINLEAEQAAMQKQIVDMYMRSMKQFTESLAKMKLPMDLDKPEKVDHGDVDVIQNLDNSKLEIDKKKKDGSRVFYGSRAFF*

>Glyma.02g279900.2.p sequence-type=predicted peptide transcript=Glyma.02g279900.2 locus=Glyma.02g279900 id=Glyma.02g279900.2.p.Wm82.a4.v1 annot-version=Wm82.a4.v1
MDSFNQSVQNSSFRNIHNICIYDNQDVYAKFSLTYNPDETLSTRIINGGGKNPTFNENLRLKITQMNAVLKCEVWMFSRSRIHMEDQLLGFALVPISQVVGKGKLTEDYSLSSTDLFHSPAGTVQLTLSLDPSLAINSSVNLIPESAKNSSISSEVILLDRKISEVMLDPVEYARIEFPDISVVKENQQMVSEYFNLASQDTNSAPSRSNIGGSLPFLHLGASPQLDDYEMTMMSSPDENHIGPISPNESIQNSCFPGSTITTLSSDDINSADSVEKKNHLSTGDSSNSITVSITVEGTQNCGAGPDTPTSKKEEGEARGNKDANFSSKEKESKKINNNNTEASKFGQVYSAPLGNINLEAEQAAMQKQIVDMYMRSMKQFTESLAKMKLPMDLDKPEKVDHGDVDVIQNLDNSKLEIDKKKKDGSRVFYGSRAFF*






Funded by the USDA-ARS. Developed by the USDA-ARS SoyBase and Legume Clade Database group at the Iowa State University, Ames, IA
 
USDA Logo
Iowa State University Logo