SoyBase SoyBase transitions to NEW site on 10/1/2024
Integrating Genetics and Genomics to Advance Soybean Research

Report for Sequence Feature Glyma.02g277500

Feature Type:gene_model
Chromosome:Gm02
Start:47852131
stop:47854322
Source:JGI
Version:Wm82.a4.v1
High confidence:yes



Annotations for Glyma.02g277500
Database IDAnnotation TypeAnnotation DescriptionAnnotation SourceMatch ScoreEvidence Code
AT1G54140.1AT TAF9,TAFII21 JGI N/AIEA
GO:0006352GO-bp DNA-templated transcription, initiation JGI N/AIEA
K03133KEGG Chromosome and associated proteins JGI N/AIEA
KOG3334 KOG Transcription initiation factor TFIID, subunit TAF9 (also component of histone acetyltransferase SAGA) JGI N/AIEA
PTHR12595PantherFam POS9-ACTIVATING FACTOR FAP7-RELATED JGI N/AIEA
PF02291Pfam Transcription initiation factor IID, 31kD subunit JGI N/AIEA

Gene model name correspondences to Glyma.02g277500 Gene Call Version Wm82.a4.v1
Corresponding NameAnnotation VersionEvidenceComments
Glyma02g44560 Wm82.a1.v1.1IGC As supplied by JGI


Coding sequences of Glyma.02g277500
>Glyma.02g277500.1 sequence-type=CDS polypeptide=Glyma.02g277500.1.p locus=Glyma.02g277500 id=Glyma.02g277500.1.Wm82.a4.v1 annot-version=Wm82.a4.v1
ATGGCAGATAAAGATGAAGAGCTGGCTATGCCAAGGGATGCAAAGATTGTGAAGTCTTTGATGAAATCAATGGGCGTGGAGGACTATGAACCTCGTGTTGTACACAAGTTTCTTGATTTATGGTATCGCTATATTGTTGACGTGTTAACGGATGCTCAAGTGTATTCAGAGCATGCAGACAAGTCTGAAATCGACTGTGATGATATTAAGCTTGCTATTCAATCCAAGCTTAACTTCAGTTTCTCGCAACCACCCCCTCGTGAGGTGCTTCTGGAGTTGGCTCATAACCGCAACAAGATACCATTGCCAAAGACTATAGCTGGACCTGTTATCCCGCTTCCACCTGATCAGGACACATTAATCAGTCCCAATTACATGTTTGCAATTCCAAACCAAAGGCCTGCTGAACCTCCTATAGAAGAAACAGAGGATGAAGAAGATACTAATACTATTCCCAACCCCTCCCAGGAAGAGCAGATAGTCATGCAACAGAATTCACCTCAAAGAGTATCATTTCCCCTGCCCAAACGCCAAAACGATTAA

>Glyma.02g277500.2 sequence-type=CDS polypeptide=Glyma.02g277500.2.p locus=Glyma.02g277500 id=Glyma.02g277500.2.Wm82.a4.v1 annot-version=Wm82.a4.v1
ATGGCAGATAAAGATGAAGAGCTGGCTATGCCAAGGGATGCAAAGATTGTGAAGTCTTTGATGAAATCAATGGGCGTGGAGGACTATGAACCTCGTGTTGTACACAAGTTTCTTGATTTATGGTATCGCTATATTGTTGACGTGTTAACGGATGCTCAAGTGTATTCAGAGCATGCAGACAAGTCTGAAATCGACTGTGATGATATTAAGCTTGCTATTCAATCCAAGCTTAACTTCAGTTTCTCGCAACCACCCCCTCGTGAGGTGCTTCTGGAGTTGGCTCATAACCGCAACAAGATACCATTGCCAAAGACTATAGCTGGACCTGTTATCCCGCTTCCACCTGATCAGGACACATTAATCAGTCCCAATTACATGTTTGCAATTCCAAACCAAAGGCCTGCTGAACCTCCTATAGAAGAAACAGAGGATGAAGAAGATACTAATACTATTCCCAACCCCTCCCAGGAAGAGCAGATAGTCATGCAACAGAATTCACCTCAAAGAGTATCATTTCCCCTGCCCAAACGCCAAAACGATTAA
Predicted protein sequences of Glyma.02g277500
>Glyma.02g277500.1.p sequence-type=predicted peptide transcript=Glyma.02g277500.1 locus=Glyma.02g277500 id=Glyma.02g277500.1.p.Wm82.a4.v1 annot-version=Wm82.a4.v1
MADKDEELAMPRDAKIVKSLMKSMGVEDYEPRVVHKFLDLWYRYIVDVLTDAQVYSEHADKSEIDCDDIKLAIQSKLNFSFSQPPPREVLLELAHNRNKIPLPKTIAGPVIPLPPDQDTLISPNYMFAIPNQRPAEPPIEETEDEEDTNTIPNPSQEEQIVMQQNSPQRVSFPLPKRQND*

>Glyma.02g277500.2.p sequence-type=predicted peptide transcript=Glyma.02g277500.2 locus=Glyma.02g277500 id=Glyma.02g277500.2.p.Wm82.a4.v1 annot-version=Wm82.a4.v1
MADKDEELAMPRDAKIVKSLMKSMGVEDYEPRVVHKFLDLWYRYIVDVLTDAQVYSEHADKSEIDCDDIKLAIQSKLNFSFSQPPPREVLLELAHNRNKIPLPKTIAGPVIPLPPDQDTLISPNYMFAIPNQRPAEPPIEETEDEEDTNTIPNPSQEEQIVMQQNSPQRVSFPLPKRQND*






Funded by the USDA-ARS. Developed by the USDA-ARS SoyBase and Legume Clade Database group at the Iowa State University, Ames, IA
 
USDA Logo
Iowa State University Logo