Glyma.02g277300

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Report for Sequence Feature Glyma.02g277300

Feature Type:	gene_model
Chromosome:	Gm02
Start:	46010712
stop:	46013329
Source:	JGI
Version:	Wm82.a2.v1
High confidence:	yes

A previous version of this gene model can be found here:

Annotations for Glyma.02g277300

Database ID	Annotation Type	Annotation Description	Annotation Source	Match Score	Evidence Code
AT2G44060.1	AT	Late embryogenesis abundant protein, group 2	JGI	N/A	IEA
GO:0009269	GO-bp	response to desiccation	EnsemblGenomes	N/A	IEA
PF03168	PFAM	Late embryogenesis abundant protein	JGI	N/A	IEA

Proteins Associated with Glyma.02g277300

Locus	Gene Symbol	Protein Name
	LEA2-9	late embryogenesis abundant 2 gene 9

Expression Patterns of Glyma.02g277300

Gene expression representations made with eFP at the University of Toronto.
Waese et al. 2017, Plant Cell 29(8):1806-1821 ePlant: Visualizing and Exploring Multiple Levels of Data for Hypothesis Generation in Plant Biology


Libault et al. 2010, Plant Phys 152(2):541-552. Complete Transcriptome of the Soybean Root Hair Cell, a Single-Cell Model, and Its Alteration in Response to Bradyrhizobium japonicum Infection	Severin et al. 2010, BMC Plant Biology 10:160 RNA-Seq Atlas of Glycine max: A guide to the soybean transcriptome

To see more experiments click HERE

Related Legume Genes

Gene families from Phytozome are displayed using the PhyloTree viewer developed by LIS.

Gene information in GlycineMine developed by LIS.

Related Plant Genes

Gene families from PhyloGenes.

Paralogs of Glyma.02g277300

Paralog	Evidence	Comments
Glyma.14g037300	IGC	Paralogs in soybean determined by Steven Cannon using BLAST, DAGChainer, PAML, and selection of gene pairs from synteny blocks with median Ks values of less than 0.35.

Gene model name correspondences to Glyma.02g277300 Gene Call Version Wm82.a2.v1

Corresponding Name	Annotation Version	Evidence	Comments
Glyma02g44540	Wm82.a1.v1.1	IGC	As supplied by JGI

Transcripts of Glyma.02g277300

Limit To All Plant Sequences

>Glyma.02g277300.2 sequence-type=transcript locus=Glyma.02g277300 ID=Glyma.02g277300.2.Wm82.a2.v1 annot-version=Wm82.a2.v1
TTTATTTAATTATTTCCCTCCTACGAAATCTTGATCTCTCTGCTGTTGTGTTTTGTTAATCTCATTCAGACAATCACAGTTATACTCTCTCTCTCTCACTTTGATCACTGATCTCATCTCAATTTTCAGATATGTCGACATCTGATAAGCCAGAAGAGGTGGAAAGGGGTAGCAAGGATGAAAAGCACAAGGAAGATGATCAAGAGGAGGGGAAGGGTGGATTCATTGAGAAGGTGAAGGATTTCATTCATGACATTGGTGAGAAGATTGAGGAAGCTATTGGGTTTGGGAAGCCGAGTGCCGATGTTACTGCGATACACATTCCATCAATTAATCTTCACAAGGCAGATCTTGTTGTTGATGTGCTCATCAAGAACCCGAATCCGGTGCCGATCCCTCTGATTGACATAGATTACTTGGTTGACAGTGATGGAAGGAAGCTAGTTTCCGGATTGATACCTGATGCGGGTACCATCCATGCACATGGAGAGCAAACTGTCAAAATTCCTGTCACTTTGATTTATGATGACATCAAGCAAACATATGCTGATATTAAACCTGGAAGCATCATTCCTTATAGGGTGAAGGTTAGTCTCATTTTTGATGTTCCCATCTTGGGAAGGCTAACTCTACCTTTGGAGAAAACTGGAGAAATTCCCATACCATACAAGCCTGATATTGATCTTGAGAAGATTCATTTTGAAAGGTTCTCTTTTGAAGAGACAATTGCAACTCTTCACTTGAAGTTGGAAAACAAGAATGATTTTGACCTCGGCCTCAACGCGCTCGATTATGAGGTCTGGCTTGGTGATGTTAGCATTGGTGGTGCAGAACTCACCAAGTCTGCTAAAATTGAAAAAAGTGGAATTAGTTATATTGATATTCCAATTACCTTCAGGCCTAAGGATTTTGGCTCTGCACTATGGGACATGATTAGAGGAAGAGGAACTGCTTACACCATAAAAGGACATATTGATGTTGACACTCCCTTTGGAGCAATGAAGTTGCCCATCAGCAAAGAAGGTGGTACTACCCGTCTTAAGAAAAAGAAGgaagatcgtgattatgatgatgatgacgatgatgaGGAATGAAGAATTGTAGCAGGTTATTACTAGCTATAAATAAAGCGGGCATTACTTTCTGAGTTCTGATGGCGAATTTTTATGTATCTTGAGAGATCAAGTTGACATTCAAATTATGTGCTAGGATAAGAATCTTGAAAATTTCTAGTTGTACTTTATTGATGATCATGACAATCTAGTGCTGTTTTAATGTGAGATAAAAGATCATTTGCCTTGAAACTTTGTGTGTGGCCGGTTTTATTTATTTTATCTAAGAGGTGGGGTTTGCTTTGTCATTCTGGAATTGAGAATTGTTTATGGCTTGTTTTGAGTTGAGGGTTGTGTCATGTGTGTGGTTTCTGTTTATGTTATCTAACAGGTATAAATCAAACAGTTCTATTGAAAAGTT

>Glyma.02g277300.3 sequence-type=transcript locus=Glyma.02g277300 ID=Glyma.02g277300.3.Wm82.a2.v1 annot-version=Wm82.a2.v1
ATTCTACTCAATTGATCAAGCATTGCCCTTATGATTCTGTTTATCTCCATTTTGGTTATAGGGAAATCCAGTGACaaaatATATGTCGACATCTGATAAGCCAGAAGAGGTGGAAAGGGGTAGCAAGGATGAAAAGCACAAGGAAGATGATCAAGAGGAGGGGAAGGGTGGATTCATTGAGAAGGTGAAGGATTTCATTCATGACATTGGTGAGAAGATTGAGGAAGCTATTGGGTTTGGGAAGCCGAGTGCCGATGTTACTGCGATACACATTCCATCAATTAATCTTCACAAGGCAGATCTTGTTGTTGATGTGCTCATCAAGAACCCGAATCCGGTGCCGATCCCTCTGATTGACATAGATTACTTGGTTGACAGTGATGGAAGGAAGCTAGTTTCCGGATTGATACCTGATGCGGGTACCATCCATGCACATGGAGAGCAAACTGTCAAAATTCCTGTCACTTTGATTTATGATGACATCAAGCAAACATATGCTGATATTAAACCTGGAAGCATCATTCCTTATAGGGTGAAGGTTAGTCTCATTTTTGATGTTCCCATCTTGGGAAGGCTAACTCTACCTTTGGAGAAAACTGGAGAAATTCCCATACCATACAAGCCTGATATTGATCTTGAGAAGATTCATTTTGAAAGGTTCTCTTTTGAAGAGACAATTGCAACTCTTCACTTGAAGTTGGAAAACAAGAATGATTTTGACCTCGGCCTCAACGCGCTCGATTATGAGGTCTGGCTTGGTGATGTTAGCATTGGTGGTGCAGAACTCACCAAGTCTGCTAAAATTGAAAAAAGTGGAATTAGTTATATTGATATTCCAATTACCTTCAGGCCTAAGGATTTTGGCTCTGCACTATGGGACATGATTAGAGGAAGAGGAACTGCTTACACCATAAAAGGACATATTGATGTTGACACTCCCTTTGGAGCAATGAAGTTGCCCATCAGCAAAGAAGGTGGTACTACCCGTCTTAAGAAAAAGAAGgaagatcgtgattatgatgatgatgacgatgatgaGGAATGAAGAATTGTAGCAGGTTATTACTAGCTATAAATAAAGCGGGCATTACTTTCTGAGTTCTGATGGCGAATTTTTATGTATCTTGAGAGATCAAGTTGACATTCAAATTATGTGCTAGGATAAGAATCTTGAAAATTTCTAGTTGTACTTTATTGATGATCATGACAATCTAGTGCTGTTTTAATGTGAGATAAAAGATCATTTGCCTTGAAACTTTGTGTGTGGCCGGTTTTATTTATTTTATCTAAGAGGTGGGGTTTGCTTTGTCATTCTGGAATTGAGAATTGTTTATGGCTTGTTTTGAGTTGAGGGTTGTGTCATGTGTGTGGTTTCTGTTTATGTTATCTAACAGGTATAAATCAAACAGTTCTATTGAAAAGTT

Coding sequences of Glyma.02g277300

Limit To All Plant Sequences

>Glyma.02g277300.1 sequence-type=CDS polypeptide=Glyma.02g277300.1.p locus=Glyma.02g277300 ID=Glyma.02g277300.1.Wm82.a2.v1 annot-version=Wm82.a2.v1
ATGTCGACATCTGATAAGCCAGAAGAGGTGGAAAGGGGTAGCAAGGATGAAAAGCACAAGGAAGATGATCAAGAGGAGGGGAAGGGTGGATTCATTGAGAAGGTGAAGGATTTCATTCATGACATTGGTGAGAAGATTGAGGAAGCTATTGGGTTTGGGAAGCCGAGTGCCGATGTTACTGCGATACACATTCCATCAATTAATCTTCACAAGGCAGATCTTGTTGTTGATGTGCTCATCAAGAACCCGAATCCGGTGCCGATCCCTCTGATTGACATAGATTACTTGGTTGACAGTGATGGAAGGAAGCTAGTTTCCGGATTGATACCTGATGCGGGTACCATCCATGCACATGGAGAGCAAACTGTCAAAATTCCTGTCACTTTGATTTATGATGACATCAAGCAAACATATGCTGATATTAAACCTGGAAGCATCATTCCTTATAGGGTGAAGGTTAGTCTCATTTTTGATGTTCCCATCTTGGGAAGGCTAACTCTACCTTTGGAGAAAACTGGAGAAATTCCCATACCATACAAGCCTGATATTGATCTTGAGAAGATTCATTTTGAAAGGTTCTCTTTTGAAGAGACAATTGCAACTCTTCACTTGAAGTTGGAAAACAAGAATGATTTTGACCTCGGCCTCAACGCGCTCGATTATGAGGTCTGGCTTGGTGATGTTAGCATTGGTGGTGCAGAACTCACCAAGTCTGCTAAAATTGAAAAAAGTGGAATTAGTTATATTGATATTCCAATTACCTTCAGGCCTAAGGATTTTGGCTCTGCACTATGGGACATGATTAGAGGAAGAGGAACTGCTTACACCATAAAAGGACATATTGATGTTGACACTCCCTTTGGAGCAATGAAGTTGCCCATCAGCAAAGAAGGTGGTACTACCCGTCTTAAGAAAAAGAAGGAAGATCGTGATTATGATGATGATGACGATGATGAGCAGGAATGA

>Glyma.02g277300.2 sequence-type=CDS polypeptide=Glyma.02g277300.2.p locus=Glyma.02g277300 ID=Glyma.02g277300.2.Wm82.a2.v1 annot-version=Wm82.a2.v1
ATGTCGACATCTGATAAGCCAGAAGAGGTGGAAAGGGGTAGCAAGGATGAAAAGCACAAGGAAGATGATCAAGAGGAGGGGAAGGGTGGATTCATTGAGAAGGTGAAGGATTTCATTCATGACATTGGTGAGAAGATTGAGGAAGCTATTGGGTTTGGGAAGCCGAGTGCCGATGTTACTGCGATACACATTCCATCAATTAATCTTCACAAGGCAGATCTTGTTGTTGATGTGCTCATCAAGAACCCGAATCCGGTGCCGATCCCTCTGATTGACATAGATTACTTGGTTGACAGTGATGGAAGGAAGCTAGTTTCCGGATTGATACCTGATGCGGGTACCATCCATGCACATGGAGAGCAAACTGTCAAAATTCCTGTCACTTTGATTTATGATGACATCAAGCAAACATATGCTGATATTAAACCTGGAAGCATCATTCCTTATAGGGTGAAGGTTAGTCTCATTTTTGATGTTCCCATCTTGGGAAGGCTAACTCTACCTTTGGAGAAAACTGGAGAAATTCCCATACCATACAAGCCTGATATTGATCTTGAGAAGATTCATTTTGAAAGGTTCTCTTTTGAAGAGACAATTGCAACTCTTCACTTGAAGTTGGAAAACAAGAATGATTTTGACCTCGGCCTCAACGCGCTCGATTATGAGGTCTGGCTTGGTGATGTTAGCATTGGTGGTGCAGAACTCACCAAGTCTGCTAAAATTGAAAAAAGTGGAATTAGTTATATTGATATTCCAATTACCTTCAGGCCTAAGGATTTTGGCTCTGCACTATGGGACATGATTAGAGGAAGAGGAACTGCTTACACCATAAAAGGACATATTGATGTTGACACTCCCTTTGGAGCAATGAAGTTGCCCATCAGCAAAGAAGGTGGTACTACCCGTCTTAAGAAAAAGAAGGAAGATCGTGATTATGATGATGATGACGATGATGAGGAATGA

>Glyma.02g277300.3 sequence-type=CDS polypeptide=Glyma.02g277300.3.p locus=Glyma.02g277300 ID=Glyma.02g277300.3.Wm82.a2.v1 annot-version=Wm82.a2.v1
ATGTCGACATCTGATAAGCCAGAAGAGGTGGAAAGGGGTAGCAAGGATGAAAAGCACAAGGAAGATGATCAAGAGGAGGGGAAGGGTGGATTCATTGAGAAGGTGAAGGATTTCATTCATGACATTGGTGAGAAGATTGAGGAAGCTATTGGGTTTGGGAAGCCGAGTGCCGATGTTACTGCGATACACATTCCATCAATTAATCTTCACAAGGCAGATCTTGTTGTTGATGTGCTCATCAAGAACCCGAATCCGGTGCCGATCCCTCTGATTGACATAGATTACTTGGTTGACAGTGATGGAAGGAAGCTAGTTTCCGGATTGATACCTGATGCGGGTACCATCCATGCACATGGAGAGCAAACTGTCAAAATTCCTGTCACTTTGATTTATGATGACATCAAGCAAACATATGCTGATATTAAACCTGGAAGCATCATTCCTTATAGGGTGAAGGTTAGTCTCATTTTTGATGTTCCCATCTTGGGAAGGCTAACTCTACCTTTGGAGAAAACTGGAGAAATTCCCATACCATACAAGCCTGATATTGATCTTGAGAAGATTCATTTTGAAAGGTTCTCTTTTGAAGAGACAATTGCAACTCTTCACTTGAAGTTGGAAAACAAGAATGATTTTGACCTCGGCCTCAACGCGCTCGATTATGAGGTCTGGCTTGGTGATGTTAGCATTGGTGGTGCAGAACTCACCAAGTCTGCTAAAATTGAAAAAAGTGGAATTAGTTATATTGATATTCCAATTACCTTCAGGCCTAAGGATTTTGGCTCTGCACTATGGGACATGATTAGAGGAAGAGGAACTGCTTACACCATAAAAGGACATATTGATGTTGACACTCCCTTTGGAGCAATGAAGTTGCCCATCAGCAAAGAAGGTGGTACTACCCGTCTTAAGAAAAAGAAGGAAGATCGTGATTATGATGATGATGACGATGATGAGGAATGA

Predicted protein sequences of Glyma.02g277300

Limit To All Plant Sequences

>Glyma.02g277300.1.p sequence-type=predicted peptide transcript=Glyma.02g277300.1 locus=Glyma.02g277300 ID=Glyma.02g277300.1.Wm82.a2.v1 annot-version=Wm82.a2.v1
MSTSDKPEEVERGSKDEKHKEDDQEEGKGGFIEKVKDFIHDIGEKIEEAIGFGKPSADVTAIHIPSINLHKADLVVDVLIKNPNPVPIPLIDIDYLVDSDGRKLVSGLIPDAGTIHAHGEQTVKIPVTLIYDDIKQTYADIKPGSIIPYRVKVSLIFDVPILGRLTLPLEKTGEIPIPYKPDIDLEKIHFERFSFEETIATLHLKLENKNDFDLGLNALDYEVWLGDVSIGGAELTKSAKIEKSGISYIDIPITFRPKDFGSALWDMIRGRGTAYTIKGHIDVDTPFGAMKLPISKEGGTTRLKKKKEDRDYDDDDDDEQE*

>Glyma.02g277300.2.p sequence-type=predicted peptide transcript=Glyma.02g277300.2 locus=Glyma.02g277300 ID=Glyma.02g277300.2.Wm82.a2.v1 annot-version=Wm82.a2.v1
MSTSDKPEEVERGSKDEKHKEDDQEEGKGGFIEKVKDFIHDIGEKIEEAIGFGKPSADVTAIHIPSINLHKADLVVDVLIKNPNPVPIPLIDIDYLVDSDGRKLVSGLIPDAGTIHAHGEQTVKIPVTLIYDDIKQTYADIKPGSIIPYRVKVSLIFDVPILGRLTLPLEKTGEIPIPYKPDIDLEKIHFERFSFEETIATLHLKLENKNDFDLGLNALDYEVWLGDVSIGGAELTKSAKIEKSGISYIDIPITFRPKDFGSALWDMIRGRGTAYTIKGHIDVDTPFGAMKLPISKEGGTTRLKKKKEDRDYDDDDDDEE*

>Glyma.02g277300.3.p sequence-type=predicted peptide transcript=Glyma.02g277300.3 locus=Glyma.02g277300 ID=Glyma.02g277300.3.Wm82.a2.v1 annot-version=Wm82.a2.v1
MSTSDKPEEVERGSKDEKHKEDDQEEGKGGFIEKVKDFIHDIGEKIEEAIGFGKPSADVTAIHIPSINLHKADLVVDVLIKNPNPVPIPLIDIDYLVDSDGRKLVSGLIPDAGTIHAHGEQTVKIPVTLIYDDIKQTYADIKPGSIIPYRVKVSLIFDVPILGRLTLPLEKTGEIPIPYKPDIDLEKIHFERFSFEETIATLHLKLENKNDFDLGLNALDYEVWLGDVSIGGAELTKSAKIEKSGISYIDIPITFRPKDFGSALWDMIRGRGTAYTIKGHIDVDTPFGAMKLPISKEGGTTRLKKKKEDRDYDDDDDDEE*

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