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Integrating Genetics and Genomics to Advance Soybean Research
SoyBase
SoyBase transitions to NEW site on 10/1/2024
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A previous version of this gene model can be found here:
| Database ID | Annotation Type | Annotation Description | Annotation Source | Match Score | Evidence Code |
|---|---|---|---|---|---|
| AT1G74470.1 | AT | Pyridine nucleotide-disulphide oxidoreductase family protein | JGI | N/A | IEA |
| GO:0015979 | GO-bp | photosynthesis | EnsemblGenomes | N/A | IEA |
| GO:0015995 | GO-bp | chlorophyll biosynthetic process | EnsemblGenomes | N/A | IEA |
| GO:0051188 | GO-bp | cofactor biosynthetic process | EnsemblGenomes | N/A | IEA |
| GO:0055114 | GO-bp | oxidation-reduction process | EnsemblGenomes | N/A | IEA |
| GO:0055114 | GO-bp | oxidation-reduction process | JGI | N/A | IEA |
| GO:0016491 | GO-mf | oxidoreductase activity | JGI | N/A | IEA |
| GO:0016628 | GO-mf | oxidoreductase activity, acting on the CH-CH group of donors, NAD or NADP as acceptor | EnsemblGenomes | N/A | IEA |
| GO:0045550 | GO-mf | geranylgeranyl reductase activity | EnsemblGenomes | N/A | IEA |
| GO:0071949 | GO-mf | FAD binding | EnsemblGenomes | N/A | IEA |
| PTHR10617 | Panther | ELECTRON TRANSFER FLAVOPROTEIN-UBIQUINONE OXIDOREDUCTASE | JGI | N/A | IEA |
| PTHR10617:SF9 | Panther | JGI | N/A | IEA | |
| PF01494 | PFAM | FAD binding domain | JGI | N/A | IEA |
| PWY-5063 | SoyCyc9 | phytyl diphosphate biosynthesis | Plant Metabolic Network | ISS | |
| PWY-5863 | SoyCyc9 | superpathway of phylloquinol biosynthesis | Plant Metabolic Network | ISS | |
| GN7V-44019 | SoyCyc9-rxn | geranylgeranyl diphosphate reductase | Plant Metabolic Network | ISS |
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Glyma.02g273800 not represented in the dataset |
Glyma.02g273800 not represented in the dataset |
| Libault et al. 2010, Plant Phys 152(2):541-552. Complete Transcriptome of the Soybean Root Hair Cell, a Single-Cell Model, and Its Alteration in Response to Bradyrhizobium japonicum Infection |
Severin et al. 2010, BMC Plant Biology 10:160 RNA-Seq Atlas of Glycine max: A guide to the soybean transcriptome |
Gene families from Phytozome are displayed using the PhyloTree viewer developed by LIS.
Gene information in GlycineMine developed by LIS.
Gene families from PhyloGenes.
| Corresponding Name | Annotation Version | Evidence | Comments |
|---|---|---|---|
| Glyma02g44145 | Wm82.a1.v1.1 | IGC | As supplied by JGI |
>Glyma.02g273800.1 sequence-type=CDS polypeptide=Glyma.02g273800.1.p locus=Glyma.02g273800 ID=Glyma.02g273800.1.Wm82.a2.v1 annot-version=Wm82.a2.v1 ATGGCTGCGAAAATTCAAACTAGTTTTTGTTTACCTACATTTTCCATTCCAACCTCAAAACCTAAACCCTACTTAAAGTCGTTCACCATCAAAGCCTCCAAATCCATCTCCGGCCGCAAGCTCCGAGCGGCAGTGATCGGCGGCGGCCCCGCCGGATCCTCCGCGGCGGAGGCCCTAGCTTCTGGCGGAGTCGAGACCTTCCTCTTCGAGCGCAACCCGCCGTCCGTCGCGAAACCATGCGGCGGCGCCATCCCTCTCTGCATGCTCGAAGAGTTCGACATCCCTAACCACCTCATCGACCGCCACGTCACGCACATGCGCATCTTCTCCCCTTCCAACATCGCCGTCGACTTCGGCAAAACACTAAAACCCCACGAGTTCATCGCCATGCTCCGCCGTGAGGTCCTCGACTCCTTCCTCCGCTCCCGCGCGCACGCCGCCGGCGCCACCGCGATCTCCGGCCTCGTCACCGCCCTCGACCTCCCCGCCTCGCCGGACGCGCCCTACACCGTCCACTACACCGCCAACGGCTCCTCGCGCCGCTCCCTCGCCGTGGACGTCGTGATCGGTGCCGACGGAGCCAACAGCCGCGTGGCCAAAGCCATCGGCGCCGGCGACTACGCCTGCGCCATCGCGTTCCAGGAGCGGATCAAGTTACCGGACGAGAAAATGGCGTACTACGAAAATCTGGCGGAGATGTACGTAGGCGACGACGTATCACCAGATTTCTACGCGTGGGTTTTTCCCAAGTGCGACCACGTGGCAGTGGGCACGGGTACAGTGCGGTCAAAGAAAGACATTAAGCTGTACCAGCGCGGGATCAGGGAAAGAGTGAAACCAAAGATCAACGGTGGGAAAGTGATCAAAGTGGAGGCGCACCCTATTCCGGAACACCCGCGTCCGGTTCGGGTGAGGGGACGCGTGGCGCTCGTAGGAGACGCTGCTGGCTACGTGACCAAGTGTTCGGGTGAGGGTATTTATTTCGCGGCGAAATCGGGTCGCGTGTGCGGAAACGGTGTCGTAAGGGCTTCGGAGGGTGGGGATAGGATGATTGACGAGTGTGATCTGAGGAGGGAGTACCTGAAGCCGTGGGACGCCGAGTATGCTAACACGTTTAGGTTTTTGGATCTGCTGCAGAGGGTTTTCTACGGTAGTAACGCGTGCAGGGAGGCTCTGGTGGAGCTGTGTGGTGATGAGTATGTTCAACGCATGACGTTTGAGAGCTATTTGTATAAGAAGTTGGCCCGTGGGAGAGTCTTGGATCATGCTAAGCTTTTCATGAATACCCTTGGCAGCTTGGTCAGGTCTAAAGTTGTTCAAACAAGCATGGAGAGTTTCATACTATGA
>Glyma.02g273800.1.p sequence-type=predicted peptide transcript=Glyma.02g273800.1 locus=Glyma.02g273800 ID=Glyma.02g273800.1.Wm82.a2.v1 annot-version=Wm82.a2.v1 MAAKIQTSFCLPTFSIPTSKPKPYLKSFTIKASKSISGRKLRAAVIGGGPAGSSAAEALASGGVETFLFERNPPSVAKPCGGAIPLCMLEEFDIPNHLIDRHVTHMRIFSPSNIAVDFGKTLKPHEFIAMLRREVLDSFLRSRAHAAGATAISGLVTALDLPASPDAPYTVHYTANGSSRRSLAVDVVIGADGANSRVAKAIGAGDYACAIAFQERIKLPDEKMAYYENLAEMYVGDDVSPDFYAWVFPKCDHVAVGTGTVRSKKDIKLYQRGIRERVKPKINGGKVIKVEAHPIPEHPRPVRVRGRVALVGDAAGYVTKCSGEGIYFAAKSGRVCGNGVVRASEGGDRMIDECDLRREYLKPWDAEYANTFRFLDLLQRVFYGSNACREALVELCGDEYVQRMTFESYLYKKLARGRVLDHAKLFMNTLGSLVRSKVVQTSMESFIL*
| Funded by the USDA-ARS. Developed by the USDA-ARS SoyBase and Legume Clade Database group at the Iowa State University, Ames, IA | ||
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