SoyBase SoyBase transitions to NEW site on 10/1/2024
Integrating Genetics and Genomics to Advance Soybean Research

Report for Sequence Feature Glyma.02g271900

Feature Type:gene_model
Chromosome:Gm02
Start:47394540
stop:47413768
Source:JGI
Version:Wm82.a4.v1
High confidence:yes



Annotations for Glyma.02g271900
Database IDAnnotation TypeAnnotation DescriptionAnnotation SourceMatch ScoreEvidence Code
AT2G27170.1AT SMC3,TTN7 JGI N/AIEA
GO:0006281GO-bp DNA repair JGI N/AIEA
GO:0007064GO-bp mitotic sister chromatid cohesion JGI N/AIEA
GO:0051276GO-bp chromosome organization JGI N/AIEA
GO:0005694GO-cc chromosome JGI N/AIEA
GO:0003682GO-mf chromatin binding JGI N/AIEA
GO:0005515GO-mf protein binding JGI N/AIEA
GO:0005524GO-mf ATP binding JGI N/AIEA
K06669KEGG Proteoglycans JGI N/AIEA
PTHR18937PantherFam STRUCTURAL MAINTENANCE OF CHROMOSOMES SMC FAMILY MEMBER JGI N/AIEA
PF06470Pfam SMC proteins Flexible Hinge Domain JGI N/AIEA
PF13304Pfam AAA domain, putative AbiEii toxin, Type IV TA system JGI N/AIEA
PF13476Pfam AAA domain JGI N/AIEA

Gene model name correspondences to Glyma.02g271900 Gene Call Version Wm82.a4.v1
Corresponding NameAnnotation VersionEvidenceComments
Glyma02g43970 Wm82.a1.v1.1IGC As supplied by JGI


Coding sequences of Glyma.02g271900
>Glyma.02g271900.1 sequence-type=CDS polypeptide=Glyma.02g271900.1.p locus=Glyma.02g271900 id=Glyma.02g271900.1.Wm82.a4.v1 annot-version=Wm82.a4.v1
ATGTACATCAAGCAGGTTGTGATTGAAGGTTTTAAGAGTTATCGAGAGCAAATTGCTACAGAGCCTTTCAGTTCTAAAGTTAATTGTGTTGTTGGTGCTAATGGATCTGGGAAGACAAACTTTTTCCATGCCATCCGTTTTGTGTTAAGTGATCTCTTTCAAAACCTACGCGGTGAAGATAGGCAGGCACTTCTCCATGAAGGAGCTGGACACCAGGTTTTATCTGCGTTCGTGGAGATTGTGTTTGATAATTCAGACAATCGTATCCCGGTTGACAAGGAGGAAGTGCGCTTGCGCCGGACTATAGGTTTCAAAAAGGATGAGTATTTTCTAGATGGAAAGCACATAACAAAAACTGAAGTGATGAATTTGCTGGAGAGTGCTGGGTTCTCCCGATCAAATCCTTATTATGTTGTACAACAAGGAAAGATAGCATCACTAACCTTGATGAAAGACTCTGAACGACTGGACTTGCTGAAGGAAATAGGTGGTACTAGAGTTTATGAGGAGAGGCGTCGCGAAAGTTTGAAAATAATGCATGAAACTGGTAATAAAAGAAAGCAAATAATCCAAGTTGTACAGTATTTAGATGAAAGGTTGAAAGAACTAGATGAGGAGAAGGAGGAACTTAGAAAATATCAGCAGCTTGACAAGCAAAGAAAATCCTTGGAATATGCTATTTATAGCAAAGAAGTTCAAGATGCTCAGCAAAAACTTACAGAGATAGAAGATGCTCGGGCCAAGGTTTCTGACACATCAGCAAGGAAGTATAATGATGTTCTTGATGCACATGAGAAATCCAAAGATTTAGAGAATACATTAAAAGATGTAACGAAAGAACTTCAAAACTTTAACAAAGAGAAAGAGGTTATTGAAAAGCGACGAACAGTGGCATTAAAGAAGCACACAGAGCTTGAGCTTGATGTCAAAGACTTGCAAGAGAAGATCTCTGGAAATACCCGAGCCAAAGAAGATGCTGCAAGACAACTGGAGATACTTGAGAAAGAAATTCAAGATTCAACTGCTGAACTGGGCAAAATTGTTCCTTTACATGAAGATCAAGTTCAGAAAGAAAAAGACATTGTCAAACGAATAATGGAGCGTGAGAAGAAACTCAGTATACTTTATCAAAAACAAGGACGTGCAACCCAGTTTTCAAGTAAAGCTTCTCGTGATAAGTGGCTTCAAAAGGAGATTGATGATCTTGAACGAGTGCATTCTTCAAACAAGGGGCAGGAGCAAAAGCTTTTGGATGAAATTGATCGGCTTAAAGAAGAACTACAGGATTGTGATGAGAACATAAACAGACGTAAATCAGAAATTACTACTTTGGAATCTCTCATTGCTCAGTCACGTGAAGGGCTTAATCGTTACAAAGAAGAGAGAGACAAGTTACATGGGGAGAGAAAGTCCCTATGGGGCAAAGAGAATGAACTTACTGCTGAAATTGATAAGCTGAGAGCTGAAGTTGAGAAGGCTGAAAAGAGTCTTGATCATGCAATTCCTGGTGATGTGAGAAGAGGGTTGAATTCAGTTAGGAAGATCTGCAGGGAGTATAACATTTCTGGAGTTCATGGTCCAATTATTGAGTTGCTGAATTGTGATGAAAAGTTTTTCACTGCTGTTGAAGTTACTGCAGGAAACAGCTTATTTCATGTGGTTGTTGAAAATGATGACAAGTCAACCCAGATAATTAGACATCTTAATTCACAGAAAGGTGGTCGAGTTACATTTATTCCACTTAACAGAGTAAAGGGTCCACGCATCACTTATCCACAGAGTTCGGATGTCATACCTCTTTTAAAGAAATTGAACTTTAAACATGACTATACTCCTGCATTCAGTCAGGTCTTTGCTAGAACAGTTATCTGCAAGAATTTGGATGTGGCTTCAAGGGTTGCTCGTTCTGATGGTCTGGACTGCATAACACTGGATGGTGATCAAGTAAGCAAGAAAGGTAGTATGACTGGAGGATTTTATGATCACAGACGATCAAGATTGAGGTTTATGAATATCATTAAGCAGAATGCAGACACTATTCATATTAGAGAGGAGGAATTGGAGAAAGTTAGATTTAATCTACAAGAGATAGACCAAAAGATTAATGAAATTGTTGCTGAGCAGCAGAAGATTGATGCCAAATGTGCTCATGACAAATCTGTGATTGAACAGCTTAAGCAGGATATTGCTAATGCTAATAAGCAGAAGCTGTTGATTTCTAAAGCACTTACAAAAAAGGAGAAGTCTGTTGGGGATGTCCAGAATCAAATTGAACAGCTTAATGCTAGTATCGCTATGAAGAAAGCTGAGATGGGCACTGAGCTCATTGATCATTTAACACCAGAGGAGAAAAAGCTTTTGTCAGATTTGAACCCTGAAATCAAAGACCTTAAAGAGAAGCTTGTTGCTTGCAAGACTGATCGCATTGAGACTGAAGCACGGAGAGCAGAGCTGGATACCAATCTAACCACTAACCTTAGGAGAAGGAAACAAGAGCTGGAGGCTGTAATATCATCTGCAGATGCTGACTCTTTGGTTGCTGATGCTGAATCAAAGTGGCAGGAACTTAGTGATGCTAAAATATTGGTTGATGATGCAATAGGGCAGCTTAGAAGTGTTACTGAAAGTATAAATGACCGAACACGACAAATTAAAAAGATCAAAGATGAATTGAATAAATTGAAGTCATTGGAGGATGAGTATGAAAGGAAACTTCAAGAAGATGCAAAAGAGTTAGAGCAATTGCAGAGTAAAAAAAACACATATGCTGCTAAAGAAGAGGAATATGCCAAGAAAATAAGGGAACTGGGACCATTGACATCAGATGCTTTTGAGGCGTATAGACGAAGGAATATTAAAGATTTGCACAAAATGCTGCACAGGTGCAATGAGCAATTGCAGCAGTTCAGTCATGTAAACAAGAAAGCCCTTGACCAGTATATAAATTTTACAGAACAACGAGAAGAACTTCAGAAAAGACAGGCTGAACTTGATGCAGGAGATGAGAAAATTAAGGAGCTAATAACAGTGCTAGATCAACGGAAGGACGAGTCAATAGAGCGCACTTTCAAAGGTGTTGCTAGGCATTTTCGGGAAGTATTTTCCGAACTTGTGCTGGGGGGACATGGTCATCTGGTTATGATGAAAAAGAAGGATGGTGATCATGATGACGACGAAGATGAGGATGGTCCTCGTGAAGCAAATCCAGAGGGGAGAGTAGAAAAGTACATTGGAGTGAAAGTGAAGGTCTCATTTACTGGACAAGGGGAGACACAGTCCATGAAGCAGTTGTCTGGGGGTCAAAAAACTGTTGTCGCCCTTACACTTATCTTTGCCATACAGCGATGTGATCCTGCTCCCTTTTATCTATTTGATGAGATCGATGCAGCGCTGGATCCACAGTACAGAACTGCTGTTGGAAATATGATTCGTCGCTTGGCTGACATAGCAAACACTCAATTTATCACAACAACATTCCGCCCGGAGCTAGTGAAAGTTGCTGATAAGATATACGGAGTAACACATAAAAACAGGGTCAGCCGTGTTAATGTTGTGTCTAAGGAAGATGCACTGGAATTTATTGAGCATGACCAGACGCACAATGCTGAATAA

>Glyma.02g271900.2 sequence-type=CDS polypeptide=Glyma.02g271900.2.p locus=Glyma.02g271900 id=Glyma.02g271900.2.Wm82.a4.v1 annot-version=Wm82.a4.v1
ATGCTTATGGAATGTTTTTTTATTTGCTCTTATAGGTACGGTTATGATACTTTCAACATGTACATCAAGCAGGTTGTGATTGAAGGTTTTAAGAGTTATCGAGAGCAAATTGCTACAGAGCCTTTCAGTTCTAAAGTTAATTGTGTTGTTGGTGCTAATGGATCTGGGAAGACAAACTTTTTCCATGCCATCCGTTTTGTGTTAAGTGATCTCTTTCAAAACCTACGCGGTGAAGATAGGCAGGCACTTCTCCATGAAGGAGCTGGACACCAGGTTTTATCTGCGTTCGTGGAGATTGTGTTTGATAATTCAGACAATCGTATCCCGGTTGACAAGGAGGAAGTGCGCTTGCGCCGGACTATAGGTTTCAAAAAGGATGAGTATTTTCTAGATGGAAAGCACATAACAAAAACTGAAGTGATGAATTTGCTGGAGAGTGCTGGGTTCTCCCGATCAAATCCTTATTATGTTGTACAACAAGGAAAGATAGCATCACTAACCTTGATGAAAGACTCTGAACGACTGGACTTGCTGAAGGAAATAGGTGGTACTAGAGTTTATGAGGAGAGGCGTCGCGAAAGTTTGAAAATAATGCATGAAACTGGTAATAAAAGAAAGCAAATAATCCAAGTTGTACAGTATTTAGATGAAAGGTTGAAAGAACTAGATGAGGAGAAGGAGGAACTTAGAAAATATCAGCAGCTTGACAAGCAAAGAAAATCCTTGGAATATGCTATTTATAGCAAAGAAGTTCAAGATGCTCAGCAAAAACTTACAGAGATAGAAGATGCTCGGGCCAAGGTTTCTGACACATCAGCAAGGAAGTATAATGATGTTCTTGATGCACATGAGAAATCCAAAGATTTAGAGAATACATTAAAAGATGTAACGAAAGAACTTCAAAACTTTAACAAAGAGAAAGAGGTTATTGAAAAGCGACGAACAGTGGCATTAAAGAAGCACACAGAGCTTGAGCTTGATGTCAAAGACTTGCAAGAGAAGATCTCTGGAAATACCCGAGCCAAAGAAGATGCTGCAAGACAACTGGAGATACTTGAGAAAGAAATTCAAGATTCAACTGCTGAACTGGGCAAAATTGTTCCTTTACATGAAGATCAAGTTCAGAAAGAAAAAGACATTGTCAAACGAATAATGGAGCGTGAGAAGAAACTCAGTATACTTTATCAAAAACAAGGACGTGCAACCCAGTTTTCAAGTAAAGCTTCTCGTGATAAGTGGCTTCAAAAGGAGATTGATGATCTTGAACGAGTGCATTCTTCAAACAAGGGGCAGGAGCAAAAGCTTTTGGATGAAATTGATCGGCTTAAAGAAGAACTACAGGATTGTGATGAGAACATAAACAGACGTAAATCAGAAATTACTACTTTGGAATCTCTCATTGCTCAGTCACGTGAAGGGCTTAATCGTTACAAAGAAGAGAGAGACAAGTTACATGGGGAGAGAAAGTCCCTATGGGGCAAAGAGAATGAACTTACTGCTGAAATTGATAAGCTGAGAGCTGAAGTTGAGAAGGCTGAAAAGAGTCTTGATCATGCAATTCCTGGTGATGTGAGAAGAGGGTTGAATTCAGTTAGGAAGATCTGCAGGGAGTATAACATTTCTGGAGTTCATGGTCCAATTATTGAGTTGCTGAATTGTGATGAAAAGTTTTTCACTGCTGTTGAAGTTACTGCAGGAAACAGCTTATTTCATGTGGTTGTTGAAAATGATGACAAGTCAACCCAGATAATTAGACATCTTAATTCACAGAAAGGTGGTCGAGTTACATTTATTCCACTTAACAGAGTAAAGGGTCCACGCATCACTTATCCACAGAGTTCGGATGTCATACCTCTTTTAAAGAAATTGAACTTTAAACATGACTATACTCCTGCATTCAGTCAGGTCTTTGCTAGAACAGTTATCTGCAAGAATTTGGATGTGGCTTCAAGGGTTGCTCGTTCTGATGGTCTGGACTGCATAACACTGGATGGTGATCAAGTAAGCAAGAAAGGTAGTATGACTGGAGGATTTTATGATCACAGACGATCAAGATTGAGGTTTATGAATATCATTAAGCAGAATGCAGACACTATTCATATTAGAGAGGAGGAATTGGAGAAAGTTAGATTTAATCTACAAGAGATAGACCAAAAGATTAATGAAATTGTTGCTGAGCAGCAGAAGATTGATGCCAAATGTGCTCATGACAAATCTGTGATTGAACAGCTTAAGCAGGATATTGCTAATGCTAATAAGCAGAAGCTGTTGATTTCTAAAGCACTTACAAAAAAGGAGAAGTCTGTTGGGGATGTCCAGAATCAAATTGAACAGCTTAATGCTAGTATCGCTATGAAGAAAGCTGAGATGGGCACTGAGCTCATTGATCATTTAACACCAGAGGAGAAAAAGCTTTTGTCAGATTTGAACCCTGAAATCAAAGACCTTAAAGAGAAGCTTGTTGCTTGCAAGACTGATCGCATTGAGACTGAAGCACGGAGAGCAGAGCTGGATACCAATCTAACCACTAACCTTAGGAGAAGGAAACAAGAGCTGGAGGCTGTAATATCATCTGCAGATGCTGACTCTTTGGTTGCTGATGCTGAATCAAAGTGGCAGGAACTTAGTGATGCTAAAATATTGGTTGATGATGCAATAGGGCAGCTTAGAAGTGTTACTGAAAGTATAAATGACCGAACACGACAAATTAAAAAGATCAAAGATGAATTGAATAAATTGAAGTCATTGGAGGATGAGTATGAAAGGAAACTTCAAGAAGATGCAAAAGAGTTAGAGCAATTGCAGAGTAAAAAAAACACATATGCTGCTAAAGAAGAGGAATATGCCAAGAAAATAAGGGAACTGGGACCATTGACATCAGATGCTTTTGAGGCGTATAGACGAAGGAATATTAAAGATTTGCACAAAATGCTGCACAGGTGCAATGAGCAATTGCAGCAGTTCAGTCATGTAAACAAGAAAGCCCTTGACCAGTATATAAATTTTACAGAACAACGAGAAGAACTTCAGAAAAGACAGGCTGAACTTGATGCAGGAGATGAGAAAATTAAGGAGCTAATAACAGTGCTAGATCAACGGAAGGACGAGTCAATAGAGCGCACTTTCAAAGGTGTTGCTAGGCATTTTCGGGAAGTATTTTCCGAACTTGTGCTGGGGGGACATGGTCATCTGGTTATGATGAAAAAGAAGGATGGTGATCATGATGACGACGAAGATGAGGATGGTCCTCGTGAAGCAAATCCAGAGGGGAGAGTAGAAAAGTACATTGGAGTGAAAGTGAAGGTCTCATTTACTGGACAAGGGGAGACACAGTCCATGAAGCAGTTGTCTGGGGGTCAAAAAACTGTTGTCGCCCTTACACTTATCTTTGCCATACAGCGATGTGATCCTGCTCCCTTTTATCTATTTGATGAGATCGATGCAGCGCTGGATCCACAGTACAGAACTGCTGTTGGAAATATGATTCGTCGCTTGGCTGACATAGCAAACACTCAATTTATCACAACAACATTCCGCCCGGAGCTAGTGAAAGTTGCTGATAAGATATACGGAGTAACACATAAAAACAGGGTCAGCCGTGTTAATGTTGTGTCTAAGGAAGATGCACTGGAATTTATTGAGCATGACCAGACGCACAATGCTGAATAA
Predicted protein sequences of Glyma.02g271900
>Glyma.02g271900.1.p sequence-type=predicted peptide transcript=Glyma.02g271900.1 locus=Glyma.02g271900 id=Glyma.02g271900.1.p.Wm82.a4.v1 annot-version=Wm82.a4.v1
MYIKQVVIEGFKSYREQIATEPFSSKVNCVVGANGSGKTNFFHAIRFVLSDLFQNLRGEDRQALLHEGAGHQVLSAFVEIVFDNSDNRIPVDKEEVRLRRTIGFKKDEYFLDGKHITKTEVMNLLESAGFSRSNPYYVVQQGKIASLTLMKDSERLDLLKEIGGTRVYEERRRESLKIMHETGNKRKQIIQVVQYLDERLKELDEEKEELRKYQQLDKQRKSLEYAIYSKEVQDAQQKLTEIEDARAKVSDTSARKYNDVLDAHEKSKDLENTLKDVTKELQNFNKEKEVIEKRRTVALKKHTELELDVKDLQEKISGNTRAKEDAARQLEILEKEIQDSTAELGKIVPLHEDQVQKEKDIVKRIMEREKKLSILYQKQGRATQFSSKASRDKWLQKEIDDLERVHSSNKGQEQKLLDEIDRLKEELQDCDENINRRKSEITTLESLIAQSREGLNRYKEERDKLHGERKSLWGKENELTAEIDKLRAEVEKAEKSLDHAIPGDVRRGLNSVRKICREYNISGVHGPIIELLNCDEKFFTAVEVTAGNSLFHVVVENDDKSTQIIRHLNSQKGGRVTFIPLNRVKGPRITYPQSSDVIPLLKKLNFKHDYTPAFSQVFARTVICKNLDVASRVARSDGLDCITLDGDQVSKKGSMTGGFYDHRRSRLRFMNIIKQNADTIHIREEELEKVRFNLQEIDQKINEIVAEQQKIDAKCAHDKSVIEQLKQDIANANKQKLLISKALTKKEKSVGDVQNQIEQLNASIAMKKAEMGTELIDHLTPEEKKLLSDLNPEIKDLKEKLVACKTDRIETEARRAELDTNLTTNLRRRKQELEAVISSADADSLVADAESKWQELSDAKILVDDAIGQLRSVTESINDRTRQIKKIKDELNKLKSLEDEYERKLQEDAKELEQLQSKKNTYAAKEEEYAKKIRELGPLTSDAFEAYRRRNIKDLHKMLHRCNEQLQQFSHVNKKALDQYINFTEQREELQKRQAELDAGDEKIKELITVLDQRKDESIERTFKGVARHFREVFSELVLGGHGHLVMMKKKDGDHDDDEDEDGPREANPEGRVEKYIGVKVKVSFTGQGETQSMKQLSGGQKTVVALTLIFAIQRCDPAPFYLFDEIDAALDPQYRTAVGNMIRRLADIANTQFITTTFRPELVKVADKIYGVTHKNRVSRVNVVSKEDALEFIEHDQTHNAE*

>Glyma.02g271900.2.p sequence-type=predicted peptide transcript=Glyma.02g271900.2 locus=Glyma.02g271900 id=Glyma.02g271900.2.p.Wm82.a4.v1 annot-version=Wm82.a4.v1
MLMECFFICSYRYGYDTFNMYIKQVVIEGFKSYREQIATEPFSSKVNCVVGANGSGKTNFFHAIRFVLSDLFQNLRGEDRQALLHEGAGHQVLSAFVEIVFDNSDNRIPVDKEEVRLRRTIGFKKDEYFLDGKHITKTEVMNLLESAGFSRSNPYYVVQQGKIASLTLMKDSERLDLLKEIGGTRVYEERRRESLKIMHETGNKRKQIIQVVQYLDERLKELDEEKEELRKYQQLDKQRKSLEYAIYSKEVQDAQQKLTEIEDARAKVSDTSARKYNDVLDAHEKSKDLENTLKDVTKELQNFNKEKEVIEKRRTVALKKHTELELDVKDLQEKISGNTRAKEDAARQLEILEKEIQDSTAELGKIVPLHEDQVQKEKDIVKRIMEREKKLSILYQKQGRATQFSSKASRDKWLQKEIDDLERVHSSNKGQEQKLLDEIDRLKEELQDCDENINRRKSEITTLESLIAQSREGLNRYKEERDKLHGERKSLWGKENELTAEIDKLRAEVEKAEKSLDHAIPGDVRRGLNSVRKICREYNISGVHGPIIELLNCDEKFFTAVEVTAGNSLFHVVVENDDKSTQIIRHLNSQKGGRVTFIPLNRVKGPRITYPQSSDVIPLLKKLNFKHDYTPAFSQVFARTVICKNLDVASRVARSDGLDCITLDGDQVSKKGSMTGGFYDHRRSRLRFMNIIKQNADTIHIREEELEKVRFNLQEIDQKINEIVAEQQKIDAKCAHDKSVIEQLKQDIANANKQKLLISKALTKKEKSVGDVQNQIEQLNASIAMKKAEMGTELIDHLTPEEKKLLSDLNPEIKDLKEKLVACKTDRIETEARRAELDTNLTTNLRRRKQELEAVISSADADSLVADAESKWQELSDAKILVDDAIGQLRSVTESINDRTRQIKKIKDELNKLKSLEDEYERKLQEDAKELEQLQSKKNTYAAKEEEYAKKIRELGPLTSDAFEAYRRRNIKDLHKMLHRCNEQLQQFSHVNKKALDQYINFTEQREELQKRQAELDAGDEKIKELITVLDQRKDESIERTFKGVARHFREVFSELVLGGHGHLVMMKKKDGDHDDDEDEDGPREANPEGRVEKYIGVKVKVSFTGQGETQSMKQLSGGQKTVVALTLIFAIQRCDPAPFYLFDEIDAALDPQYRTAVGNMIRRLADIANTQFITTTFRPELVKVADKIYGVTHKNRVSRVNVVSKEDALEFIEHDQTHNAE*






Funded by the USDA-ARS. Developed by the USDA-ARS SoyBase and Legume Clade Database group at the Iowa State University, Ames, IA
 
USDA Logo
Iowa State University Logo