SoyBase SoyBase transitions to NEW site on 10/1/2024
Integrating Genetics and Genomics to Advance Soybean Research

Report for Sequence Feature Glyma.02g252600

Feature Type:gene_model
Chromosome:Gm02
Start:45796633
stop:45800096
Source:JGI
Version:Wm82.a4.v1
High confidence:yes



Annotations for Glyma.02g252600
Database IDAnnotation TypeAnnotation DescriptionAnnotation SourceMatch ScoreEvidence Code
AT5G05940.1AT ATROPGEF5,ROPGEF5 JGI N/AIEA
PTHR33101PantherFam ROP GUANINE NUCLEOTIDE EXCHANGE FACTOR 1 JGI N/AIEA
PF03759Pfam PRONE (Plant-specific Rop nucleotide exchanger) JGI N/AIEA

Gene model name correspondences to Glyma.02g252600 Gene Call Version Wm82.a4.v1
Corresponding NameAnnotation VersionEvidenceComments
Glyma02g41980 Wm82.a1.v1.1IGC As supplied by JGI


Coding sequences of Glyma.02g252600
>Glyma.02g252600.1 sequence-type=CDS polypeptide=Glyma.02g252600.1.p locus=Glyma.02g252600 id=Glyma.02g252600.1.Wm82.a4.v1 annot-version=Wm82.a4.v1
ATGGATGCTTTATGCAACAAGGGTGAAAATTTTCAAAAGAAAAAAGATGGGGTTCCTTCTTCTTCTAGTGATTCAACTCACGAATGTTCTTCTCCTTCTCTTGGCTGGCCTATTCGGAAGGCTACACTCTCCAAATGCCGCAAATCAGATGAAAAAGAAAATGAACCTGTTTCTCACTTGGAAGATTCAAAATTTACCACTGTCAGTTCCAAAATGTCAGGAATTGATGCAATGAAGGAAAGGTTTGCAAAATTACTGCTTGGGGAAGATATGTCAGGATCTGGGAAAGGAGTGTGCAGTGCTTTGGCCATCTCTAATGCTATCACTAATCTCTGTGCAACTGTGTTTGGGCAATTGTGGAGACTAGAACCTATACCTTGTGAAAAGAAAGAAATGTGGCGGAGAGAGATGGAATGGCTTCTTAGTGTTAGTGATCACATTGTTGAGTTAATTCCTTCTTGGCAAACATTTCCAGATGGAAGTAAGCTTGAGGTAATGACTTGCAGGCCAAGGTCAGATCTTTTCATGAATCTTCCAGCTCTGCACAAACTTGACAATATGCTTCTTGAAATTTTAGATGGTTGCAAGGATATGGAGTTTTGGTATGTTGACCAAGGGATTGTAGCCCAAGATGCAGATGGATCAGCTTCATTTTGCAAAAGAATTCAACGGCAAGAGGATAAATGGTGGCTCCCAGTTCCTCGTGTCCCCCCTTCTGGCCTCAGTGAGAACTCAAGAAAGCAGTTGAATCACACAAGAGAATGTGCAAGCCAAATACTAAAAGCTTCTATGGCTATCAACAACGGTGCTTTAGCTGAAATGGAAGTTCCCGAGTCATACTTGGAAACCCTTCCTAAGAATGGAAGGACTTGCTTGGGGGATTTTATTTACCATTACATCACATCAGAGAAATTCTCTCCAGAGTGCCTGCTTGATTGCCTAGACCTCTCCTCTGAGCATGTTGCACTAGAGATTGCAAACTGTGTGGAAGCCTCGATATACGTGTGGCGTAGAAGAGCTCACTCTAAACCCCCAGCTAATCCTAATCGTTCATCTACAAAGTCATCCTGGGAAATTGTCAAGGACTTCATGGCTGATGGAGATAAGAGAGAACTACTAGCAGAAAGAGCTGAAAATGTTCTACTTTCATTGAAGCAAAGATTCCCAGGTCTCACTCAAACTACCTTGGATACCAGCAAGATCCAGTGCAACAAGGATATTGGAAAATCCATACTAGAGAGCTATTCAAGAGTGTTGGAGAGCATGGCATTTAACATCGTGGCTCGCATAGAAGATTTGCTATATGTGGATGACTTAACAAAACATTCAGATAGGTTTCCTCTGGTTCCAATGACAGTGTCTGTCTCAGGCACTCCTCATAAAGCAATTGGCACACCAAGAAGCTTTTCACCTGCACCACCACTAATTAGTCCTGCAAGGGGAGAGAGATCCCCTTTCCTTGGCAACAACCACAACAACAATAATAATATCAAACCTCAACGTCGTGGCTTCGGGGTGAGAAGAGTATTGTCAAATTATCTAGGGGCAGAATCTAAAGAAACAAAGATTTTAAGCAATTCAACTGTGGTGAATGGTTCAAACACAAGCAACAATAAGGAAGAACAACCAGAACGTCAAAAGAAATCACATGCCATGCATGGCAAGACAAAATGA
Predicted protein sequences of Glyma.02g252600
>Glyma.02g252600.1.p sequence-type=predicted peptide transcript=Glyma.02g252600.1 locus=Glyma.02g252600 id=Glyma.02g252600.1.p.Wm82.a4.v1 annot-version=Wm82.a4.v1
MDALCNKGENFQKKKDGVPSSSSDSTHECSSPSLGWPIRKATLSKCRKSDEKENEPVSHLEDSKFTTVSSKMSGIDAMKERFAKLLLGEDMSGSGKGVCSALAISNAITNLCATVFGQLWRLEPIPCEKKEMWRREMEWLLSVSDHIVELIPSWQTFPDGSKLEVMTCRPRSDLFMNLPALHKLDNMLLEILDGCKDMEFWYVDQGIVAQDADGSASFCKRIQRQEDKWWLPVPRVPPSGLSENSRKQLNHTRECASQILKASMAINNGALAEMEVPESYLETLPKNGRTCLGDFIYHYITSEKFSPECLLDCLDLSSEHVALEIANCVEASIYVWRRRAHSKPPANPNRSSTKSSWEIVKDFMADGDKRELLAERAENVLLSLKQRFPGLTQTTLDTSKIQCNKDIGKSILESYSRVLESMAFNIVARIEDLLYVDDLTKHSDRFPLVPMTVSVSGTPHKAIGTPRSFSPAPPLISPARGERSPFLGNNHNNNNNIKPQRRGFGVRRVLSNYLGAESKETKILSNSTVVNGSNTSNNKEEQPERQKKSHAMHGKTK*






Funded by the USDA-ARS. Developed by the USDA-ARS SoyBase and Legume Clade Database group at the Iowa State University, Ames, IA
 
USDA Logo
Iowa State University Logo