SoyBase SoyBase transitions to NEW site on 10/1/2024
Integrating Genetics and Genomics to Advance Soybean Research

Report for Sequence Feature Glyma.02g248300

Feature Type:gene_model
Chromosome:Gm02
Start:45393647
stop:45402953
Source:JGI
Version:Wm82.a4.v1
High confidence:yes



Annotations for Glyma.02g248300
Database IDAnnotation TypeAnnotation DescriptionAnnotation SourceMatch ScoreEvidence Code
AT3G55480.2AT PAT2 JGI N/AIEA
GO:0006886GO-bp intracellular protein transport JGI N/AIEA
GO:0016192GO-bp vesicle-mediated transport JGI N/AIEA
GO:0030117GO-cc membrane coat JGI N/AIEA
GO:0030123GO-cc AP-3 adaptor complex JGI N/AIEA
K12397KEGG Membrane trafficking JGI N/AIEA
PTHR11134PantherFam ADAPTOR COMPLEX SUBUNIT BETA FAMILY MEMBER JGI N/AIEA
PTHR11134:SF1PantherFam AP-3 COMPLEX SUBUNIT BETA JGI N/AIEA
PF01602Pfam Adaptin N terminal region JGI N/AIEA

Gene model name correspondences to Glyma.02g248300 Gene Call Version Wm82.a4.v1
Corresponding NameAnnotation VersionEvidenceComments
Glyma02g41570 Wm82.a1.v1.1IGC As supplied by JGI


Coding sequences of Glyma.02g248300
>Glyma.02g248300.1 sequence-type=CDS polypeptide=Glyma.02g248300.1.p locus=Glyma.02g248300 id=Glyma.02g248300.1.Wm82.a4.v1 annot-version=Wm82.a4.v1
ATGATGTTCCCGCAATTCGGAGCGACGGCGGAATCCCTGAACAAGGCGTCGACGGCGGTGTTTCGGATCGGCACCGACGCGCACCTCTACGACGATCCCGAAGACGTGAACATCGCCCCTCTCCTCGACAGCAAGTTCGATTCCGAGAAGTGTGAAGCTCTCAAGCGCCTTCTCGCTCTCATCGCTCAGGGCTTTGACGTCTCCAACTTCTTCCCTCAGGTTGTTAAAAATGTTGCGTCTCAGTCCTTGGAAGTGAAGAAGCTGGTCTACTTGTACCTCCTGCATTACGCTGAAAAGCGTCCAAATGAGGCGTTATTGTCGATTAATTACTTCCAGAAGGACCTCGGGGACACAAATCCGTTGGTGAGGGCATGGGCGCTTCGTGCCATGGCTGGGATCCGCCTTCATGTAATTGCGCCTCTTGTTATTGTTGCTGTGCAAAAATGTGCGAGAGATCCTTCTGTCTATGTTAGAAAATGTGCAGCTAATGCTCTTCCCAAGCTTCATGATTTGCGGATGGAGGAACATGCTTCTGCAATTGAAGAGATTGTTGGACTACTTTTAAATGACCATTCCCCAGGAGTTGTTGGAGCTGCTGCATCTGCATTTACTTCAGTTTGCCCTGACAATTTTTCATTGATTGGAAGAAATTACAGACGGTTGTGTGAGATTCTTCCTGATGTGGAAGAGTGGGGTCAAATAATTCTAATTGGGATCCTTCTGCGGTATGTAATAGCAAGGCATGGGCTTGTTAAAGAATCCATCATGTTTTCTTTGTACAATAAAGACATCAACAATTTAGAGGAAGATGAGTCCTACATTACTTCAAAAGAAGATGCCGGCTATTCCATTGATAAGACTGTATCTGAATTAGCTACTATGGTCTTCCAGTGTTACATTGAAGGTCCAGATGAGTACTTATCACGCTCAAGTTCTACAAATAGGGTTGCTCCTAAATTAGATGTATCACAATATACATCTTGCAGTAATGATGTTGTGAAGATTCTGCTGCAGTGTACATCACCGTTGCTATGGAGTAATAACAGTGCAGTTGTTCTTGCAGCTGCTGGTGTACACTGGATAATGGCTTCTAAGGAGCACATCACTAGAATTGTTAAACCACTCTTGTTTGTCCTGCGATCATCGTCTGCCTCAAGATATGTGGTATTGTGCAATATCCAAGTGTTTGCTAAAGCTATCCCATCTCTCTTTGCTCCACACTACCAAGATTTTTTCATATGCTCTTCAGATTCCTATCAGATAAAGGCGTTGAAGCTGGATATACTTTCTTCTATTGCTACGGATTCATCCATTTCAGTCATTTATAAAGAGTTTCAGGATTATATCGGAGATCCAGATAGGAGATTTGCTGCTGACACAGTTGCTGCCATTGGTCTATGTGCTCAGCGACTTCCAAAAATGGCAACTTTATGCTTGGAAGGATTGTTGACTCTGGTTAGACAAGATTTTTTTTGTGGTGAAATTAGATCCTTGGATGGAGAAGAGGGTGTGCTAATTCAGGCAATTATATTCATCAAATCAATTATAAAATTAGAACCATCCAGTTATGAGAAGGTTATAATTCAGTTAGTCCGTAGCTTGGATAAAATCAAGGTTCCAGCTGCCCGTGCAATGATTATTTGGATACTGGGGAAATATTGTTCTTTGGGTGACATAATTCCAAGGATGTTGAGTACAGTACTTAAGTATCTTGCCCTGTGTTTTACTTCAGAAGCATTAGAAGCTAAGCTTCAGATTCTTAATACAACTGCAAAGGTCTTACTGTGCATCAAGGGAGAAGATATTTTGACTGTGAGAAAAATTTGGACTTATATAATTGAATTGGCTGAGTGTGACCTTAACTATGATATTCGTGACCGTTCACGTTTCTTAAAGAAACTTCTCTCTAGTAATTTGGAGTCTCAACATGGGGAAGAAGAAAATAGTGAATCACAAAAAAGAGACCAATCCCATATACTTTCTGAATGCATATTTGGTGGACAGACAAAAGCCGTGACAGTTCCATCTGAACCCATTGATTACCGGTTTTATCTTCCCGGGTCTCTTTCACAGTTAGTATTCCATGCAGCTCCAGGCTATGAGCCTCTCCCAAAACCCTGTAGCCTGCCATACACTGATCTTGATCAGTATGATGGAGCTTCTAAGAGTGATTCAGATGAGGAGGATAATACTGGCACATCTGGTTCTTTGGATGAGGAAAGTGCTTCTGATTATAGTTCTGAACAATCTATTACTGCTTCAGGCGAAGTCACTGGCAGTGATGAATCTGTTTCTGGCAATGAAGGAGAAGATAATGCTGATCCATTGATTCAAATTTCAGACACTGTCAATGTCTGTGAAAATCAGAATGGTGGGGCTCCCTCTGGCGCAGCTGGTTTTCGGGACTTGATGTCAACAAAGTCTCTTGAGTCTTGGTTAGATGAACCAGCCAGGTCATCTAAAGGAAGTGAGATAGAGCAAAGCCGAGTTCGTAGATCTTCAGCAAGAATAACCATTGGAAATATTGGAGGCCGGGTTAAACCTAAATGCTACTCTCTCTTAGATCCTGTAAATGGAAATGGGTTAAAGGTGAATTATTCATTTTCATCTGAGACTTCAAGCATATCCTCGCACCTTGTATGTTTGGAAGTATTATTTGAAAATTGTTCTCTGGAGCCCATGTTCGATATAGTCTTAATAGAAGAAGATTATAGCAAAAGCTCTGATTCTACTGATCAAACATCATCACCAACTGAAAATACCTTAAAATTTCATGTTGATAAACCAGCATTGGTTTCCATGGAGGAGATCCCTTCTCTGGAGCCTGGTCAGACAGCAAACCGAACTCTGCTAGTTCGTTTCCATCACCACCTTTTGCCACTGAAACTGGCTTTATTTTGCAATGACAAGAAATTCCTTGTCAAGTTAAAGCCTGACATAGGATACTTTGTAAAACCACTTCCCCTCAGTATTGAAGATTTCAAAGATAAGGAATCACGCCTTCCAGGGATGTTTGAATATGTGAGAAGTTGCACCTTTAACGATCACATTCTAGAGCTGAACAAGGACAGCAACTCTTTGACAGAGGACAAGTTCCTTGTGATATGTGAAACGTTAGCACTGAAGATGCTGAGCAATGCAAATCTTTCTCTGGTATCTGTGGATATGCCGGTTGCTGCCAACCTTGATGATGCATCTGGTTTGTGTTTGCGTTTCAGCAGTGAGATCTTGAGCAATTCCATGCCATGCTTAATTACAGTTACTGTTGAAGGTAAATGCTCCGATCCATTAATTGTTTCTGTAAAAGTTAACTGTGAAGAGACTGTATTTGGCTTAAATTTCTTAAATAGGGTTGTCAATTTCTTAGTTGAGCCGTCTGTTGGCCACTTATAA
Predicted protein sequences of Glyma.02g248300
>Glyma.02g248300.1.p sequence-type=predicted peptide transcript=Glyma.02g248300.1 locus=Glyma.02g248300 id=Glyma.02g248300.1.p.Wm82.a4.v1 annot-version=Wm82.a4.v1
MMFPQFGATAESLNKASTAVFRIGTDAHLYDDPEDVNIAPLLDSKFDSEKCEALKRLLALIAQGFDVSNFFPQVVKNVASQSLEVKKLVYLYLLHYAEKRPNEALLSINYFQKDLGDTNPLVRAWALRAMAGIRLHVIAPLVIVAVQKCARDPSVYVRKCAANALPKLHDLRMEEHASAIEEIVGLLLNDHSPGVVGAAASAFTSVCPDNFSLIGRNYRRLCEILPDVEEWGQIILIGILLRYVIARHGLVKESIMFSLYNKDINNLEEDESYITSKEDAGYSIDKTVSELATMVFQCYIEGPDEYLSRSSSTNRVAPKLDVSQYTSCSNDVVKILLQCTSPLLWSNNSAVVLAAAGVHWIMASKEHITRIVKPLLFVLRSSSASRYVVLCNIQVFAKAIPSLFAPHYQDFFICSSDSYQIKALKLDILSSIATDSSISVIYKEFQDYIGDPDRRFAADTVAAIGLCAQRLPKMATLCLEGLLTLVRQDFFCGEIRSLDGEEGVLIQAIIFIKSIIKLEPSSYEKVIIQLVRSLDKIKVPAARAMIIWILGKYCSLGDIIPRMLSTVLKYLALCFTSEALEAKLQILNTTAKVLLCIKGEDILTVRKIWTYIIELAECDLNYDIRDRSRFLKKLLSSNLESQHGEEENSESQKRDQSHILSECIFGGQTKAVTVPSEPIDYRFYLPGSLSQLVFHAAPGYEPLPKPCSLPYTDLDQYDGASKSDSDEEDNTGTSGSLDEESASDYSSEQSITASGEVTGSDESVSGNEGEDNADPLIQISDTVNVCENQNGGAPSGAAGFRDLMSTKSLESWLDEPARSSKGSEIEQSRVRRSSARITIGNIGGRVKPKCYSLLDPVNGNGLKVNYSFSSETSSISSHLVCLEVLFENCSLEPMFDIVLIEEDYSKSSDSTDQTSSPTENTLKFHVDKPALVSMEEIPSLEPGQTANRTLLVRFHHHLLPLKLALFCNDKKFLVKLKPDIGYFVKPLPLSIEDFKDKESRLPGMFEYVRSCTFNDHILELNKDSNSLTEDKFLVICETLALKMLSNANLSLVSVDMPVAANLDDASGLCLRFSSEILSNSMPCLITVTVEGKCSDPLIVSVKVNCEETVFGLNFLNRVVNFLVEPSVGHL*






Funded by the USDA-ARS. Developed by the USDA-ARS SoyBase and Legume Clade Database group at the Iowa State University, Ames, IA
 
USDA Logo
Iowa State University Logo