SoyBase SoyBase transitions to NEW site on 10/1/2024
Integrating Genetics and Genomics to Advance Soybean Research

Report for Sequence Feature Glyma.02g238800

Feature Type:gene_model
Chromosome:Gm02
Start:44564787
stop:44569527
Source:JGI
Version:Wm82.a4.v1
High confidence:yes



Annotations for Glyma.02g238800
Database IDAnnotation TypeAnnotation DescriptionAnnotation SourceMatch ScoreEvidence Code
AT5G17380.1AT JGI N/AIEA
4.1.1.8EC oxalyl-CoA decarboxylase JGI N/AIEA
GO:0000287GO-mf magnesium ion binding JGI N/AIEA
GO:0003824GO-mf catalytic activity JGI N/AIEA
GO:0030976GO-mf thiamine pyrophosphate binding JGI N/AIEA
K12261KEGG Peroxisome JGI N/AIEA
PTHR18968PantherFam THIAMINE PYROPHOSPHATE ENZYMES JGI N/AIEA
PF00205Pfam Thiamine pyrophosphate enzyme, central domain JGI N/AIEA
PF02775Pfam Thiamine pyrophosphate enzyme, C-terminal TPP binding domain JGI N/AIEA
PF02776Pfam Thiamine pyrophosphate enzyme, N-terminal TPP binding domain JGI N/AIEA

Gene model name correspondences to Glyma.02g238800 Gene Call Version Wm82.a4.v1
Corresponding NameAnnotation VersionEvidenceComments
Glyma02g40550 Wm82.a1.v1.1IGC As supplied by JGI


Coding sequences of Glyma.02g238800
>Glyma.02g238800.1 sequence-type=CDS polypeptide=Glyma.02g238800.1.p locus=Glyma.02g238800 id=Glyma.02g238800.1.Wm82.a4.v1 annot-version=Wm82.a4.v1
ATGGAGATAGATGGCAACGTTCTCGCGGCCAAGTCGCTGGTGCGCTTCGGTGTGCAGCACATGTTCGGCGTGGTGGGGATTCCGGTGACGTCGCTGGCCAACCGCGCCGTCTCGCTCGGTGTCAGATTCATTGCTTTTCACAACGAGCAGTCCGCGGGCTACGCCGCCTCCGCCTACGGCTACCTCACCGGCCGCCCCGGCGTGTTCCTCACCGTCTCCGGCCCCGGCTGCGTCCACGGCCTCGCCGGCCTCTCCAACGCCTCCGTCAACACCTGGCCCACCGTCATGATCTCCGGCTCCTGCGACCAAAACGACGTCGGCCGCGGCGATTTTCAAGAACTCAACCAGATCGAAGCCACCAAACCCTTCACCAAACTCTCCGTCAAAGCCTCGCATATCTCCGAAATCCCGGCCCGCGTGGCCCAGGTTCTCGATTGGGCCCAATCGGCCCGGCCCGGTGGCTGCTACTTAGATCTCCCCACCGACGTCTTACATCAAAAAATCTCCGAGTCCGAAGCAGAGAAACTCTTATCCGAAGCAGAAAATAACCGTTCGATTTCCAATCCTAAACCCGAACCTCCTCTTTTCAATTCAAAGATTGAACAAGCGGTTTCTCTTCTCAGACACGCGGAGAGGCCGTTGATAGTGTTCGGAAAAGGAGCGGCGTATGCACGTGCGGAGCACGTGCTTACGAAGCTGGTGAATTCGACTGGGATTCCGTTTCTCCCAACTCCGATGGGTAAAGGAATTTTACCAGATAATCACGAGCTTGCGGCTACTGCAGCAAGGTCACTCGCGATTGGGAAGTGTGACGTGGCGCTTGTTGTTGGAGCGAGACTCAACTGGCTTCTACACTTCGGTGAGCCACCAAAATGGTCGAAGGACGTGAAATTCATCTTGGTGGATGTGAGTGAAGAGGAAATTGAGCTGAGGAAGCCTCATTTAGGGTTAATTGGTGATGCTAAGCACGTGATTGAGGTTTTGAACAAGGAGATTAAGGACGATCCGTTTTGCTTGGGGAGCACGCATCCCTGGGTGGAGGCGATTTCGAACAAGGCGAAGGACAATGTGGCGAAGATGGAGGTTCAGCTGAAGAAGGACATTGTGCCGTTTAATTTCTTGACGCCCATGAGGATTATAAGGGATGCCATTGCGGGTTTGGGGAGCCCTGCTCCCATTGTGGTTTCGGAAGGGGCGAATACCATGGATGTGGGAAGGTCTGTGTTGGTTCAGACTGAGCCCCGGACGAGGTTGGATGCTGGCACGTGGGGGACCATGGGGGTTGGTCTTGGTTACTGCATTGCTGCTGCGGTTGCTGAGCCCGGGCGGCTCGTGGTTGCAGTTGAAGGAGATTCTGGATTTGGGTTTAGTGCTATGGAAGTTGAGACGTTGGTACGGTACCAGCTGCCTGTGGTCGTGATTGTTTTCAACAATGGTGGCGTATATGGTGGTGACCGTAGACACCCAGAGGAGATAGATGGACCTCACAAAGATGATCCTGCCCCCACAGATTTTGTCCCAAATGCAGGATACCATGCTTTGATAGAAGCTTTTGGTGGAAAGGGCTATCTTGTTGGGACGCCTGATGAACTAAAGTCTGCTCTTTCAGAATCCTTCTCTGCTCGGAAACCAGCCGTAGTAAATGTTGTGATTGATCCCTATGCTGGTTCAGAGAGTGGGAGGATGCAACATAAGAATTGA

>Glyma.02g238800.2 sequence-type=CDS polypeptide=Glyma.02g238800.2.p locus=Glyma.02g238800 id=Glyma.02g238800.2.Wm82.a4.v1 annot-version=Wm82.a4.v1
ATGGAGATAGATGGCAACGTTCTCGCGGCCAAGTCGCTGGTGCGCTTCGGTGTGCAGCACATGTTCGGCGTGGTGGGGATTCCGGTGACGTCGCTGGCCAACCGCGCCGTCTCGCTCGGTGTCAGATTCATTGCTTTTCACAACGAGCAGTCCGCGGGCTACGCCGCCTCCGCCTACGGCTACCTCACCGGCCGCCCCGGCGTGTTCCTCACCGTCTCCGGCCCCGGCTGCGTCCACGGCCTCGCCGGCCTCTCCAACGCCTCCGTCAACACCTGGCCCACCGTCATGATCTCCGGCTCCTGCGACCAAAACGACGTCGGCCGCGGCGATTTTCAAGAACTCAACCAGATCGAAGCCACCAAACCCTTCACCAAACTCTCCGTCAAAGCCTCGCATATCTCCGAAATCCCGGCCCGCGTGGCCCAGGTTCTCGATTGGGCCCAATCGGCCCGGCCCGGTGGCTGCTACTTAGATCTCCCCACCGACGTCTTACATCAAAAAATCTCCGAGTCCGAAGCAGAGAAACTCTTATCCGAAGCAGAAAATAACCGTTCGATTTCCAATCCTAAACCCGAACCTCCTCTTTTCAATTCAAAGATTGAACAAGCGGTTTCTCTTCTCAGACACGCGGAGAGGCCGTTGATAGTGTTCGGAAAAGGAGCGGCGTATGCACGTGCGGAGCACGTGCTTACGAAGCTGGTGAATTCGACTGGGATTCCGTTTCTCCCAACTCCGATGGGTAAAGGAATTTTACCAGATAATCACGAGCTTGCGGCTACTGCAGCAAGGTCACTCGCGATTGGGAAGTGTGACGTGGCGCTTGTTGTTGGAGCGAGACTCAACTGGCTTCTACACTTCGGTGAGCCACCAAAATGGTCGAAGGACGTGAAATTCATCTTGGTGGATGTGAGTGAAGAGGAAATTGAGCTGAGGAAGCCTCATTTAGGGTTAATTGGTGATGCTAAGCACGTGATTGAGGTTTTGAACAAGGAGATTAAGGACGATCCGTTTTGCTTGGGGAGCACGCATCCCTGGGTGGAGGCGATTTCGAACAAGGCGAAGGACAATGTGGCGAAGATGGAGGTTCAGCTGAAGAAGGACATTGTGCCGTTTAATTTCTTGACGCCCATGAGGATTATAAGGGATGCCATTGCGGGTTTGGGGAGCCCTGCTCCCATTGTGGTTTCGGAAGGGGCGAATACCATGGATGTGGGAAGGTCTGTGTTGGTTCAGACTGAGCCCCGGACGAGGTTGGATGCTGGCACGTGGGGGACCATGGGGGTTGGTCTTGGTTACTGCATTGCTGCTGCGGTTGCTGAGCCCGGGCGGCTCGTGGTTGCAGTTGAAGGAGATTCTGGATTTGGGTTTAGTGCTATGGAAGTTGAGACGTTGGTACGGTACCAGCTGCCTGTGGTCGTGATTGTTTTCAACAATGGTGGCGTATATGGTGGTGACCGTAGACACCCAGAGGAGATAGATGGACCTCACAAAGATGATCCTGCCCCCACAGATTTTGTCCCAAATGCAGGATACCATGCTTTGATAGAAGCTTTTGGTGGAAAGGGCTATCTTGTTGGGACGCCTGATGAACTAAAGTCTGCTCTTTCAGAATCCTTCTCTGCTCGGAAACCAGCCGTAGTAAATGTTGTGATTGATCCCTATGCTGGTTCAGAGAGTGGGAGGATGCAACATAAGAATTGA

>Glyma.02g238800.3 sequence-type=CDS polypeptide=Glyma.02g238800.3.p locus=Glyma.02g238800 id=Glyma.02g238800.3.Wm82.a4.v1 annot-version=Wm82.a4.v1
ATGGAGATAGATGGCAACGTTCTCGCGGCCAAGTCGCTGGTGCGCTTCGGTGTGCAGCACATGTTCGGCGTGGTGGGGATTCCGGTGACGTCGCTGGCCAACCGCGCCGTCTCGCTCGGTGTCAGATTCATTGCTTTTCACAACGAGCAGTCCGCGGGCTACGCCGCCTCCGCCTACGGCTACCTCACCGGCCGCCCCGGCGTGTTCCTCACCGTCTCCGGCCCCGGCTGCGTCCACGGCCTCGCCGGCCTCTCCAACGCCTCCGTCAACACCTGGCCCACCGTCATGATCTCCGGCTCCTGCGACCAAAACGACGTCGGCCGCGGCGATTTTCAAGAACTCAACCAGATCGAAGCCACCAAACCCTTCACCAAACTCTCCGTCAAAGCCTCGCATATCTCCGAAATCCCGGCCCGCGTGGCCCAGGTTCTCGATTGGGCCCAATCGGCCCGGCCCGGTGGCTGCTACTTAGATCTCCCCACCGACGTCTTACATCAAAAAATCTCCGAGTCCGAAGCAGAGAAACTCTTATCCGAAGCAGAAAATAACCGTTCGATTTCCAATCCTAAACCCGAACCTCCTCTTTTCAATTCAAAGATTGAACAAGCGGTTTCTCTTCTCAGACACGCGGAGAGGCCGTTGATAGTGTTCGGAAAAGGAGCGGCGTATGCACGTGCGGAGCACGTGCTTACGAAGCTGGTGAATTCGACTGGGATTCCGTTTCTCCCAACTCCGATGGGTAAAGGAATTTTACCAGATAATCACGAGCTTGCGGCTACTGCAGCAAGGTCACTCGCGATTGGGAAGTGTGACGTGGCGCTTGTTGTTGGAGCGAGACTCAACTGGCTTCTACACTTCGGTGAGCCACCAAAATGGTCGAAGGACGTGAAATTCATCTTGGTGGATGTGAGTGAAGAGGAAATTGAGCTGAGGAAGCCTCATTTAGGGTTAATTGGTGATGCTAAGCACGTGATTGAGGTTTTGAACAAGGAGATTAAGGACGATCCGTTTTGCTTGGGGAGCACGCATCCCTGGGTGGAGGCGATTTCGAACAAGGCGAAGGACAATGTGGCGAAGATGGAGGTTCAGCTGAAGAAGGACATTGTGCCGTTTAATTTCTTGACGCCCATGAGGATTATAAGGGATGCCATTGCGGGTTTGGGGAGCCCTGCTCCCATTGTGGTTTCGGAAGGGGCGAATACCATGGATGTGGGAAGGTCTGTGTTGGTTCAGACTGAGCCCCGGACGAGGTTGGATGCTGGCACGTGGGGGACCATGGGGGTTGGTCTTGGTTACTGCATTGCTGCTGCGGTTGCTGAGCCCGGGCGGCTCGTGGTTGCAGTTGAAGGAGATTCTGGATTTGGGTTTAGTGCTATGGAAGTTGAGACGTTGGTACGGTACCAGCTGCCTGTGGTCGTGATTGTTTTCAACAATGGTGGCGTATATGGTGGTGACCGTAGACACCCAGAGGAGATAGATGGACCTCACAAAGATGATCCTGCCCCCACAGATTTTGTCCCAAATGCAGGATACCATGCTTTGATAGAAGCTTTTGGTGGAAAGGGCTATCTTGTTGGGACGCCTGATGAACTAAAGTCTGCTCTTTCAGAATCCTTCTCTGCTCGGAAACCAGCCGTAGTAAATGTTGTGATTGATCCCTATGCTGGTTCAGAGAGTGGGAGGATGCAACATAAGAATTGA
Predicted protein sequences of Glyma.02g238800
>Glyma.02g238800.1.p sequence-type=predicted peptide transcript=Glyma.02g238800.1 locus=Glyma.02g238800 id=Glyma.02g238800.1.p.Wm82.a4.v1 annot-version=Wm82.a4.v1
MEIDGNVLAAKSLVRFGVQHMFGVVGIPVTSLANRAVSLGVRFIAFHNEQSAGYAASAYGYLTGRPGVFLTVSGPGCVHGLAGLSNASVNTWPTVMISGSCDQNDVGRGDFQELNQIEATKPFTKLSVKASHISEIPARVAQVLDWAQSARPGGCYLDLPTDVLHQKISESEAEKLLSEAENNRSISNPKPEPPLFNSKIEQAVSLLRHAERPLIVFGKGAAYARAEHVLTKLVNSTGIPFLPTPMGKGILPDNHELAATAARSLAIGKCDVALVVGARLNWLLHFGEPPKWSKDVKFILVDVSEEEIELRKPHLGLIGDAKHVIEVLNKEIKDDPFCLGSTHPWVEAISNKAKDNVAKMEVQLKKDIVPFNFLTPMRIIRDAIAGLGSPAPIVVSEGANTMDVGRSVLVQTEPRTRLDAGTWGTMGVGLGYCIAAAVAEPGRLVVAVEGDSGFGFSAMEVETLVRYQLPVVVIVFNNGGVYGGDRRHPEEIDGPHKDDPAPTDFVPNAGYHALIEAFGGKGYLVGTPDELKSALSESFSARKPAVVNVVIDPYAGSESGRMQHKN*

>Glyma.02g238800.2.p sequence-type=predicted peptide transcript=Glyma.02g238800.2 locus=Glyma.02g238800 id=Glyma.02g238800.2.p.Wm82.a4.v1 annot-version=Wm82.a4.v1
MEIDGNVLAAKSLVRFGVQHMFGVVGIPVTSLANRAVSLGVRFIAFHNEQSAGYAASAYGYLTGRPGVFLTVSGPGCVHGLAGLSNASVNTWPTVMISGSCDQNDVGRGDFQELNQIEATKPFTKLSVKASHISEIPARVAQVLDWAQSARPGGCYLDLPTDVLHQKISESEAEKLLSEAENNRSISNPKPEPPLFNSKIEQAVSLLRHAERPLIVFGKGAAYARAEHVLTKLVNSTGIPFLPTPMGKGILPDNHELAATAARSLAIGKCDVALVVGARLNWLLHFGEPPKWSKDVKFILVDVSEEEIELRKPHLGLIGDAKHVIEVLNKEIKDDPFCLGSTHPWVEAISNKAKDNVAKMEVQLKKDIVPFNFLTPMRIIRDAIAGLGSPAPIVVSEGANTMDVGRSVLVQTEPRTRLDAGTWGTMGVGLGYCIAAAVAEPGRLVVAVEGDSGFGFSAMEVETLVRYQLPVVVIVFNNGGVYGGDRRHPEEIDGPHKDDPAPTDFVPNAGYHALIEAFGGKGYLVGTPDELKSALSESFSARKPAVVNVVIDPYAGSESGRMQHKN*

>Glyma.02g238800.3.p sequence-type=predicted peptide transcript=Glyma.02g238800.3 locus=Glyma.02g238800 id=Glyma.02g238800.3.p.Wm82.a4.v1 annot-version=Wm82.a4.v1
MEIDGNVLAAKSLVRFGVQHMFGVVGIPVTSLANRAVSLGVRFIAFHNEQSAGYAASAYGYLTGRPGVFLTVSGPGCVHGLAGLSNASVNTWPTVMISGSCDQNDVGRGDFQELNQIEATKPFTKLSVKASHISEIPARVAQVLDWAQSARPGGCYLDLPTDVLHQKISESEAEKLLSEAENNRSISNPKPEPPLFNSKIEQAVSLLRHAERPLIVFGKGAAYARAEHVLTKLVNSTGIPFLPTPMGKGILPDNHELAATAARSLAIGKCDVALVVGARLNWLLHFGEPPKWSKDVKFILVDVSEEEIELRKPHLGLIGDAKHVIEVLNKEIKDDPFCLGSTHPWVEAISNKAKDNVAKMEVQLKKDIVPFNFLTPMRIIRDAIAGLGSPAPIVVSEGANTMDVGRSVLVQTEPRTRLDAGTWGTMGVGLGYCIAAAVAEPGRLVVAVEGDSGFGFSAMEVETLVRYQLPVVVIVFNNGGVYGGDRRHPEEIDGPHKDDPAPTDFVPNAGYHALIEAFGGKGYLVGTPDELKSALSESFSARKPAVVNVVIDPYAGSESGRMQHKN*






Funded by the USDA-ARS. Developed by the USDA-ARS SoyBase and Legume Clade Database group at the Iowa State University, Ames, IA
 
USDA Logo
Iowa State University Logo