Glyma.02g236700

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Report for Sequence Feature Glyma.02g236700

Feature Type:	gene_model
Chromosome:	Gm02
Start:	42454972
stop:	42459020
Source:	JGI
Version:	Wm82.a2.v1
High confidence:	yes

A previous version of this gene model can be found here:

Annotations for Glyma.02g236700

Database ID	Annotation Type	Annotation Description	Annotation Source	Match Score	Evidence Code
AT5G20920.1	AT	eukaryotic translation initiation factor 2 beta subunit	JGI	N/A	IEA
GO:0006413	GO-bp	translational initiation	EnsemblGenomes	N/A	IEA
GO:0006413	GO-bp	translational initiation	JGI	N/A	IEA
GO:0003743	GO-mf	translation initiation factor activity	EnsemblGenomes	N/A	IEA
GO:0003743	GO-mf	translation initiation factor activity	JGI	N/A	IEA
KOG2768	KOG	Translation initiation factor 2, beta subunit (eIF-2beta)	JGI	N/A	IEA
PTHR23001	Panther	EUKARYOTIC TRANSLATION INITIATION FACTOR	JGI	N/A	IEA
PF01873	PFAM	Domain found in IF2B/IF5	JGI	N/A	IEA

Expression Patterns of Glyma.02g236700

Gene expression representations made with eFP at the University of Toronto.
Waese et al. 2017, Plant Cell 29(8):1806-1821 ePlant: Visualizing and Exploring Multiple Levels of Data for Hypothesis Generation in Plant Biology


Libault et al. 2010, Plant Phys 152(2):541-552. Complete Transcriptome of the Soybean Root Hair Cell, a Single-Cell Model, and Its Alteration in Response to Bradyrhizobium japonicum Infection	Severin et al. 2010, BMC Plant Biology 10:160 RNA-Seq Atlas of Glycine max: A guide to the soybean transcriptome

To see more experiments click HERE

Related Legume Genes

Gene families from Phytozome are displayed using the PhyloTree viewer developed by LIS.

Gene information in GlycineMine developed by LIS.

Related Plant Genes

Gene families from PhyloGenes.

Paralogs of Glyma.02g236700

Paralog	Evidence	Comments
Glyma.14g205500	IGC	Paralogs in soybean determined by Steven Cannon using BLAST, DAGChainer, PAML, and selection of gene pairs from synteny blocks with median Ks values of less than 0.35.

Gene model name correspondences to Glyma.02g236700 Gene Call Version Wm82.a2.v1

Corresponding Name	Annotation Version	Evidence	Comments
Glyma02g40310	Wm82.a1.v1.1	IGC	As supplied by JGI

Coding sequences of Glyma.02g236700

Limit To All Plant Sequences

>Glyma.02g236700.1 sequence-type=CDS polypeptide=Glyma.02g236700.1.p locus=Glyma.02g236700 ID=Glyma.02g236700.1.Wm82.a2.v1 annot-version=Wm82.a2.v1
ATGGCCGACGAAACACCAAATGAGATGAAGGAGGAGGTTCCAGAAATTGTTCCTTTTGATCCTACCAAGAAGAAGAAGAAGAAGAAGATTACAATTGTAGATCCTGCTGATGACCCTGTGGAGAAATTGGCTGAGAAGACAGAAAACCTCTCAGTTTCTGAGGGGGTTGAGACTGCATTTGCTGGTTTGAAAAAGAAGAAGAAGAAGCCTGTTGAAATGAGTAACTTGAATGATGAGAGTGGAGATGCAAATGAAGATTTGGATGATCACCCTGAAGATGATGAAGGAGAAGTGGTTGCTCCCGAGGCTCGCTATCCTTGGGAAGGGAGTGATCGTGATTATGAATATGAGGAGCTTCTTGGCAGGGTGTTTAACATTCTACGTGAGAATAATCCAGAACTAGCTGGAGATCGGCGAAGGACAGTTATGAGGCCTCCTCAAGTTCTTCGTGAGGGCACAAAGAAAACTGTGTTTGTCAATTTTATGGATCTATGCAAAACGATGCATCGGCAGCCAGACCATGTCATGGCTTTCTTGCTTGCTGAATTGGGTACAAGTGGCTCCCTTGATGGACAGCAGAGATTGGTTGTAAAGGGAAGGTTTGCACCAAAGAACTTTGAAGGAATTCTGCGACGATATGTCAATGAATACGTTATTTGCCTTGGGTGCAAGAGTCCGGATACTATACTTACAAAGGAGAATCGTCTCTTCTTTCTCCGGTGTGAGAAGTGTGGATCAGGAAGATCAGTTGCTCCAATCAAGGCTGGTTTTGTTGCTCGTGTTGGCCGAAGGAACACAGGGACATAG

Predicted protein sequences of Glyma.02g236700

Limit To All Plant Sequences

>Glyma.02g236700.1.p sequence-type=predicted peptide transcript=Glyma.02g236700.1 locus=Glyma.02g236700 ID=Glyma.02g236700.1.Wm82.a2.v1 annot-version=Wm82.a2.v1
MADETPNEMKEEVPEIVPFDPTKKKKKKKITIVDPADDPVEKLAEKTENLSVSEGVETAFAGLKKKKKKPVEMSNLNDESGDANEDLDDHPEDDEGEVVAPEARYPWEGSDRDYEYEELLGRVFNILRENNPELAGDRRRTVMRPPQVLREGTKKTVFVNFMDLCKTMHRQPDHVMAFLLAELGTSGSLDGQQRLVVKGRFAPKNFEGILRRYVNEYVICLGCKSPDTILTKENRLFFLRCEKCGSGRSVAPIKAGFVARVGRRNTGT*

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