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Report for Sequence Feature Glyma.02g233600

Feature Type:gene_model
Chromosome:Gm02
Start:43939798
stop:43943988
Source:JGI
Version:Wm82.a4.v1
High confidence:yes



Annotations for Glyma.02g233600
Database IDAnnotation TypeAnnotation DescriptionAnnotation SourceMatch ScoreEvidence Code
AT2G30320.1AT JGI N/AIEA
4.2.1.70EC pseudouridylate synthase JGI N/AIEA
5.4.99.12EC tRNA pseudouridine38-40 synthase JGI N/AIEA
GO:0001522GO-bp pseudouridine synthesis JGI N/AIEA
GO:0009451GO-bp RNA modification JGI N/AIEA
GO:0003723GO-mf RNA binding JGI N/AIEA
GO:0009982GO-mf pseudouridine synthase activity JGI N/AIEA
K06173KEGG Transfer RNA biogenesis JGI N/AIEA
KOG2553 KOG Pseudouridylate synthase JGI N/AIEA
PTHR11142PantherFam PSEUDOURIDYLATE SYNTHASE JGI N/AIEA
PTHR11142:SF9PantherFam PSEUDOU_SYNTH_1 DOMAIN-CONTAINING PROTEIN JGI N/AIEA
PF01416Pfam tRNA pseudouridine synthase JGI N/AIEA

Gene model name correspondences to Glyma.02g233600 Gene Call Version Wm82.a4.v1
Corresponding NameAnnotation VersionEvidenceComments
Glyma02g39981 Wm82.a1.v1.1IGC As supplied by JGI


Coding sequences of Glyma.02g233600
>Glyma.02g233600.1 sequence-type=CDS polypeptide=Glyma.02g233600.1.p locus=Glyma.02g233600 id=Glyma.02g233600.1.Wm82.a4.v1 annot-version=Wm82.a4.v1
ATGGCTACATGGTGTATGCGAGCCCCACTGTTTCCTTTGCTAAAAAAAGCTCCCTTTATTACAGGGAAGAGAAGGAGAAGGACATGGTTCCATTGTTGCTCTTCTCCGCAGGCATGGCAACCTTCTCGTAAGAAAAAAGTCGCTATGCTTGTCGCCTATGTTGGCACCAATTACCGAGGTCTCCAAATGCAGCACGATGAACATTCACTCTCAACTATTGAAAAAGAACTAGAAACTGCCATATTCAAGGCTGGTGGGATTCGTGAAAGTAATTTTGGGGATCTGCAGAAGATTGGATGGGCTAGAAGCAGCCGGACTGACAAAGGAGTTCACTCTCTTGCTACAATTATATCCTTTAAAATGGAAATCCCGGAAAATGCGTGGAACGGAGACCCTTATGGCTTTGGCCTTGCAAATTATGTTAACTCCTATCTTCCCTTTGATATTAAAGTTATTAGCATTTTGCCCTCACAAAGGAGCTTTGATCCCAGGAAGGAATGTATTTTGCGGAAGTATTCCTACCTCCTCCCTGCTGAAATTATTGGTATTCAAAGCCATTTCAGCGATGAAGTTGATTACCACATATCAGAGTTCAATGATATTCTTAATGTATTTGAGGGGATACATCCTTTCCATAATTATACGGCTAGGTCCAAGTACAGGAAACAATTTCCTAATAGGCAGTCATCATCAAAGAGTGGCACATCAGCAAGGGAGAGTTTGTCATATGAGTCTGAATGTGAGTACAGTGACGGGGAAGAAAACTCTGAAACTGATGAGGCATATACAGAAAATATAGTGTGCCAAAGCCAGAAGTTTTCAGAAACTCATCATTTTGCTGAACCTGTTGTTGGCTCTAGCAATAAGAATGGAAATGGTTTGCATGACCAAGACTCTAGATTGGTTGCTCGTGCAAGATGGTTATATGAACCTGATGAAGCAGACAGATTAAGTGCTTCCCATTTCAGAAAAGTTTTTCAGTGTTCCTGTGGAAAACTGGAAACATCACTGGGATATAATTACATAGAGATCTCCATCCAGGGAGAGTCCTTCATGTTACATCAGATAAGAAAAATGGTTGGGACAGCTGTGGCAGTAAAACGCAAGGCACTGCCAAAAGATATTATAAAGCTGTCACTGACAAGGTTCTCGCGGATTATTCTACCCCTTGCACCTTCAGAAGCTCTGATATTAAGGGGAAACAGATTCTCAATAAGAACACGACCAGGAAACATAACAAGGCCTGAGATGCAGACAATAGTTAAATCAGAAGAAATTAAGAAGGCAGTTGATGATTTTTACACATCAGTTATGCTACCTCAAGTTTCAAAATTATTGGACCCATCAAGATCTCCTTGGGATGAATGGATTGAGAAGCTGGATGCTCACACAAGCATACCAAATGATCAGTTGGATGAGGTCAGGAAGGCTTGGAATTTGTTTAAAGAAAAATTTGAAACTACAACTAGCACTCATCCATGA
Predicted protein sequences of Glyma.02g233600
>Glyma.02g233600.1.p sequence-type=predicted peptide transcript=Glyma.02g233600.1 locus=Glyma.02g233600 id=Glyma.02g233600.1.p.Wm82.a4.v1 annot-version=Wm82.a4.v1
MATWCMRAPLFPLLKKAPFITGKRRRRTWFHCCSSPQAWQPSRKKKVAMLVAYVGTNYRGLQMQHDEHSLSTIEKELETAIFKAGGIRESNFGDLQKIGWARSSRTDKGVHSLATIISFKMEIPENAWNGDPYGFGLANYVNSYLPFDIKVISILPSQRSFDPRKECILRKYSYLLPAEIIGIQSHFSDEVDYHISEFNDILNVFEGIHPFHNYTARSKYRKQFPNRQSSSKSGTSARESLSYESECEYSDGEENSETDEAYTENIVCQSQKFSETHHFAEPVVGSSNKNGNGLHDQDSRLVARARWLYEPDEADRLSASHFRKVFQCSCGKLETSLGYNYIEISIQGESFMLHQIRKMVGTAVAVKRKALPKDIIKLSLTRFSRIILPLAPSEALILRGNRFSIRTRPGNITRPEMQTIVKSEEIKKAVDDFYTSVMLPQVSKLLDPSRSPWDEWIEKLDAHTSIPNDQLDEVRKAWNLFKEKFETTTSTHP*






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