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Report for Sequence Feature Glyma.02g232800

Feature Type:gene_model
Chromosome:Gm02
Start:43851029
stop:43854467
Source:JGI
Version:Wm82.a4.v1
High confidence:yes



Annotations for Glyma.02g232800
Database IDAnnotation TypeAnnotation DescriptionAnnotation SourceMatch ScoreEvidence Code
AT2G30260.1AT U2B\'\' JGI N/AIEA
GO:0000398GO-bp mRNA splicing, via spliceosome JGI N/AIEA
GO:0003676GO-mf nucleic acid binding JGI N/AIEA
GO:0017069GO-mf snRNA binding JGI N/AIEA
K11094KEGG Spliceosome JGI N/AIEA
KOG4206 KOG Spliceosomal protein snRNP-U1A/U2B JGI N/AIEA
PTHR10501PantherFam U1 SMALL NUCLEAR RIBONUCLEOPROTEIN A/U2 SMALL NUCLEAR RIBONUCLEOPROTEIN B JGI N/AIEA
PF00076Pfam RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain) JGI N/AIEA
PF13893Pfam RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain) JGI N/AIEA

Gene model name correspondences to Glyma.02g232800 Gene Call Version Wm82.a4.v1
Corresponding NameAnnotation VersionEvidenceComments
Glyma02g39890 Wm82.a1.v1.1IGC As supplied by JGI


Coding sequences of Glyma.02g232800
>Glyma.02g232800.1 sequence-type=CDS polypeptide=Glyma.02g232800.1.p locus=Glyma.02g232800 id=Glyma.02g232800.1.Wm82.a4.v1 annot-version=Wm82.a4.v1
ATGCTCTCAGGGGATATACCTCCCAATCAGACCATTTACATCAAGAATCTCAATGAGAAGGTCAAGAAAGATGAATTGAAGAGATCTCTGTATTGCTTATTCTCTCAATATGGAAGAATTTTGGATGTTATTGCTCTAAAGACACCCAAGCTTCGGGGACAGGCATGGGTTTGTTTCAGTGAAGTCACTGCTGCAAGCAATGCAGTGCGACAAATGCAAAACTTCCCTTTCTATGACAAACCTATGAGAATTCATTATGCAAAAACAAAGTCAGACTGTATTGCAAAAGAAGAGGGTAGTTTTGTTCCAAGGGAAAAGAAGAAGAAACAAGAGGAGAAAGCTGAAAGAAAGCGGCGTGTTGAGGAAGCACAGCAATCTGGTGTGGCTAATGGAACACATAGTGCAAGTAATGGTGGTCCAACTGCATCATTCCGTCAAGGACCCGGTGCTCAAGAAGCAGCTGCTCCTAACAATATTTTGTTCATAGAGAATCTGCCTCATGAAACTACTGGTAGGATGCTTGAAATGCTCTTTGAACAATACCCAGGTTTTAAGGAAGTGCGCTTGATTGAAGCAAAGCCAGGGATCGCATTTGTTGATTTTGAAGATGAGGTGCAATCATCCATGGCCATGCAGGCTCTTCATGGCTTCAAAATCACCCCCCAGAATCCCATGATTATAACCTTTGCTAAGAAGTAG
Predicted protein sequences of Glyma.02g232800
>Glyma.02g232800.1.p sequence-type=predicted peptide transcript=Glyma.02g232800.1 locus=Glyma.02g232800 id=Glyma.02g232800.1.p.Wm82.a4.v1 annot-version=Wm82.a4.v1
MLSGDIPPNQTIYIKNLNEKVKKDELKRSLYCLFSQYGRILDVIALKTPKLRGQAWVCFSEVTAASNAVRQMQNFPFYDKPMRIHYAKTKSDCIAKEEGSFVPREKKKKQEEKAERKRRVEEAQQSGVANGTHSASNGGPTASFRQGPGAQEAAAPNNILFIENLPHETTGRMLEMLFEQYPGFKEVRLIEAKPGIAFVDFEDEVQSSMAMQALHGFKITPQNPMIITFAKK*






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