Report for Sequence Feature Glyma.02g232600
Feature Type: gene_model
Chromosome: Gm02
Start: 42001353
stop: 42004784
Source: JGI
Version: Wm82.a2.v1
High confidence: yes
A previous version of this gene model can be found here:
Annotations for Glyma.02g232600
Database ID Annotation Type Annotation Description Annotation Source Match Score Evidence Code
AT2G38470.1 AT
WRKY DNA-binding protein 33
JGI N/A IEA
GO:0006351 GO-bp
transcription, DNA-templated
EnsemblGenomes N/A IEA
GO:0006355 GO-bp
regulation of transcription, DNA-templated
EnsemblGenomes N/A IEA
GO:0006355 GO-bp
regulation of transcription, DNA-templated
JGI N/A IEA
GO:0005634 GO-cc
nucleus
EnsemblGenomes N/A IEA
GO:0003677 GO-mf
DNA binding
EnsemblGenomes N/A IEA
GO:0003700 GO-mf
DNA binding transcription factor activity
EnsemblGenomes N/A IEA
GO:0003700 GO-mf
sequence-specific DNA binding transcription factor activity
JGI N/A IEA
GO:0043565 GO-mf
sequence-specific DNA binding
EnsemblGenomes N/A IEA
GO:0043565 GO-mf
sequence-specific DNA binding
JGI N/A IEA
PF03106 PFAM
WRKY DNA -binding domain
JGI N/A IEA
Proteins Associated with Glyma.02g232600
Locus Gene Symbol Protein Name
WRKY39 WRKY transcription factor 39
WRKY15 WRKY Transcripiton Factor
Expression Patterns of Glyma.02g232600
Gene expression representations made with eFP at the University of Toronto.
Waese et al. 2017, Plant Cell 29(8):1806-1821 ePlant: Visualizing and Exploring Multiple Levels of Data for Hypothesis Generation in Plant Biology
To see more experiments click HERE
Related Legume Genes
Gene families from Phytozome are displayed using the PhyloTree viewer developed by LIS .
Gene information in GlycineMine developed by LIS .
Related Plant Genes
Gene families from PhyloGenes .
Paralogs of Glyma.02g232600
Paralog Evidence Comments
Glyma.14g200200 IGC Paralogs in soybean determined by Steven Cannon using BLAST, DAGChainer, PAML, and selection of gene pairs from synteny blocks with median Ks values of less than 0.35.
Gene model name correspondences to Glyma.02g232600 Gene Call Version Wm82.a2.v1
Corresponding Name Annotation Version Evidence Comments
Glyma02g39870 Wm82.a1.v1.1 IGC As supplied by JGI
Coding sequences of Glyma.02g232600
Show Sequence BLAST Sequence at SoyBase BLAST Sequence against GenBank NT Limit To All Plant Sequences
>Glyma.02g232600.1 sequence-type=CDS polypeptide=Glyma.02g232600.1.p locus=Glyma.02g232600 ID=Glyma.02g232600.1.Wm82.a2.v1 annot-version=Wm82.a2.v1
ATGGCATCTTCTTCTGGTAGTTTAGACACCTCTGCAAGTGCAAACTCCTTCACCAACTTCACCTTCTCCACACACCCTTTCATGACCACTTCTTTCTCTGACCTTCTTGCTTCTCCCACAGACAACAACAAACCACCACATGGTGGTGGTGGTGGTTTGTCTGAGAGAACTGGCTCTGGTGTCCCCAAATTCAAGTCCACACCACCACCTTCTCTGCCTCTCTCTCCCCCTCCCATTTCTCCTTCTTCCTACTTTTCTATTCCTCCTGGTTTGAGCCCTGCTGAGCTTCTTGACTCACCTGTTCTCCTTAACTCTTCCAACATTCTGCCATCTCCAACAACTGGAGCATTTGTTGCTCGGAGCTTCAATTGGAAGAGCAGTTCCGGGGGGAACCAGCGAATTGTCAAAGAAGAAGACAAAGGCTTCTCAAATTTCTCCTTTCAAACCCAACAAGGACCTCCTGCTTCATCCACAGCAACATATCAGTCTTCAAATGTCACAGTTCAAACACAACAGCCATGGAGTTATCAGGAGACCACAAAGCAGGATAATTTTTCTTCAGGAAAGAGCATGATGAAAACTGAAAAATCTTCATCCATGCAAAGTTTTTCCCCTGAGATTGCTAGTGTCCAAAATAATCATAGCAATGGGTTTCAATCGGATTATGGCAATTACCCCCCACAATCTCAGACCTTAAGCAGAAGGTCAGATGATGGGTACAATTGGAGGAAATATGGCCAAAAACAAGTGAAGGGAAGTGAAAATCCAAGAAGTTATTACAAATGCACATACCCCAACTGCCCTACAAAGAAGAAGGTTGAGAGGTCTTTAGATGGACAAATTACTGAGATCGTTTATAAGGGTACTCATAACCATCCTAAGCCTCAAAATACTAGGAGAAACTCATCAAATTCCTCTTCTCTTGCAATCCCTCATTCAAATCCCATCAGCGCTGAAATCCCAGATCAATCCTATGCCACACATGGAAGTGGACAAATGGATTCAGCTGCCACCCCAGAAAACTCATCAATATCAATTGGAGATGATGATTTTGAGCAGAGTTCTCAAAAGTGTAAATCAGGAGGGGATGAATATGATGAAGATGAACCTGATGCCAAAAGATGGAAAATTGAAGGTGAAAATGAGGGTATGTCTGCCCCTGGAAGTAGAACAGTAAGAGAACCTAGAGTTGTAGTTCAGACAACCAGTGACATTGATATCCTAGATGATGGGTATAGATGGAGAAAATACGGGCAGAAAGTAGTGAAGGGCAATCCAAATCCAAGGAGTTACTACAAGTGTACACACCCAGGATGTCCAGTGAGGAAGCATGTGGAAAGAGCTTCACATGACCTAAGGGCTGTGATCACAACCTATGAGGGGAAGCACAACCATGATGTTCCTGCAGCTCGTGGCAGTGGCAGCCATTCTGTTAACAGACCAATGCCAAACAATGCTTCAAACCCTACCAACACTGCAGCCACTGCCATAAGTCCCTTGCAAGTGATCCAACACAGTGACAATTCCCATCAGAACCAAAGATCTCAAGCACCACCAGAGGGGCAATCACCCTTCACCCTAGAGATGCTACAAAGTCCAGGAAGTTTTGGATTCTCAGGGTTTGGGAATCCAATGCAATCTTACATGAATCAGCAGCAACAACAACTATCTGACAATGTTTTCTCTTCCAGAGCCAAGGAGGAGCCTAGAGATGACATGTTCCTTGAGTCTCTACTATGCTGA
Predicted protein sequences of Glyma.02g232600
Show Sequence BLAST Sequence at SoyBase BLAST Sequence against GenBank NR Limit To All Plant Sequences
>Glyma.02g232600.1.p sequence-type=predicted peptide transcript=Glyma.02g232600.1 locus=Glyma.02g232600 ID=Glyma.02g232600.1.Wm82.a2.v1 annot-version=Wm82.a2.v1
MASSSGSLDTSASANSFTNFTFSTHPFMTTSFSDLLASPTDNNKPPHGGGGGLSERTGSGVPKFKSTPPPSLPLSPPPISPSSYFSIPPGLSPAELLDSPVLLNSSNILPSPTTGAFVARSFNWKSSSGGNQRIVKEEDKGFSNFSFQTQQGPPASSTATYQSSNVTVQTQQPWSYQETTKQDNFSSGKSMMKTEKSSSMQSFSPEIASVQNNHSNGFQSDYGNYPPQSQTLSRRSDDGYNWRKYGQKQVKGSENPRSYYKCTYPNCPTKKKVERSLDGQITEIVYKGTHNHPKPQNTRRNSSNSSSLAIPHSNPISAEIPDQSYATHGSGQMDSAATPENSSISIGDDDFEQSSQKCKSGGDEYDEDEPDAKRWKIEGENEGMSAPGSRTVREPRVVVQTTSDIDILDDGYRWRKYGQKVVKGNPNPRSYYKCTHPGCPVRKHVERASHDLRAVITTYEGKHNHDVPAARGSGSHSVNRPMPNNASNPTNTAATAISPLQVIQHSDNSHQNQRSQAPPEGQSPFTLEMLQSPGSFGFSGFGNPMQSYMNQQQQQLSDNVFSSRAKEEPRDDMFLESLLC*