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Report for Sequence Feature Glyma.02g227200

Feature Type:gene_model
Chromosome:Gm02
Start:43247443
stop:43251624
Source:JGI
Version:Wm82.a4.v1
High confidence:yes



Annotations for Glyma.02g227200
Database IDAnnotation TypeAnnotation DescriptionAnnotation SourceMatch ScoreEvidence Code
AT5G05580.1AT FAD8 JGI N/AIEA
GO:0006629GO-bp lipid metabolic process JGI N/AIEA
GO:0055114GO-bp obsolete oxidation-reduction process JGI N/AIEA
GO:0016717GO-mf oxidoreductase activity, acting on paired donors, with oxidation of a pair of donors resulting in the reduction of molecular oxygen to two molecules of water JGI N/AIEA
K10257KEGG Lipid biosynthesis proteins JGI N/AIEA
PTHR32100PantherFam OMEGA-6 FATTY ACID DESATURASE, CHLOROPLASTIC JGI N/AIEA
PF00487Pfam Fatty acid desaturase JGI N/AIEA
PF11960Pfam Domain of unknown function (DUF3474) JGI N/AIEA

Proteins Associated with Glyma.02g227200
LocusGene SymbolProtein Name
FAD3b omega-3-fatty acid desaturase 3 gene 2
FAD3B omega-3 fatty acid desaturase, endoplasmic reticulum
FAD3B fatty acid desaturase

Gene model name correspondences to Glyma.02g227200 Gene Call Version Wm82.a4.v1
Corresponding NameAnnotation VersionEvidenceComments
Glyma02g39230 Wm82.a1.v1.1IGC As supplied by JGI


Coding sequences of Glyma.02g227200
>Glyma.02g227200.1 sequence-type=CDS polypeptide=Glyma.02g227200.1.p locus=Glyma.02g227200 id=Glyma.02g227200.1.Wm82.a4.v1 annot-version=Wm82.a4.v1
ATGGTTAAAGACACAAAGCCTTTAGCCTATGCTGCCAATAATGGATACCAACAAAAGGGTTCTTCTTTTGATTTTGATCCTAGCGCTCCTCCACCGTTTAAGATTGCAGAAATCAGAGCTTCAATACCAAAACATTGCTGGGTCAAGAATCCATGGAGATCCCTCAGTTATGTTCTCAGGGATGTGCTTGTAATTGCTGCATTGGTGGCTGCAGCAATTCACTTCGACAACTGGCTTCTCTGGCTAATCTATTGCCCCATTCAAGGCACAATGTTCTGGGCTCTCTTTGTTCTTGGACATGATTGTGGCCATGGAAGCTTTTCAGATAGCCCTTTGCTGAATAGCCTGGTGGGACACATCTTGCATTCCTCAATTCTTGTGCCATACCATGGATGGAGAATTAGCCACAGAACTCACCATCAAAACCATGGACACATTGAGAAGGATGAGTCATGGGTTCCATTAACAGAGAAGATTTACAAGAATCTAGACAGCATGACAAGACTCATTAGATTCACTGTGCCATTTCCATTGTTTGTGTATCCAATTTATTTGTTTTCAAGAAGCCCCGGAAAGGAAGGCTCTCACTTCAATCCCTACAGCAATCTGTTTCCACCCAGTGAGAGAAAAGGAATAGCAATATCAACACTGTGTTGGGCTACCATGTTTTCTCTGCTTATCTATCTCTCATTCATAACTAGTCCACTTCTAGTGCTCAAGCTCTATGGAATTCCATATTGGATATTTGTTATGTGGCTGGACTTTGTCACATACTTGCATCACCATGGTCACCACCAGAAACTGCCTTGGTACCGCGGCAAGGAATGGAGTTATTTAAGAGGTGGCCTCACCACTGTGGATCGTGACTATGGTTGGATCAATAACATTCACCATGACATTGGCACCCATGTTATCCACCATCTTTTCCCCCAAATTCCTCATTATCACCTCGTTGAAGCGACACAAGCAGCAAAACCAGTTCTTGGAGATTACTACCGTGAGCCAGAAAGATCTGCGCCATTACCATTTCATCTAATAAAGTATTTAATTCAGAGTATGAGACAAGACCACTTCGTAAGTGACACTGGAGATGTTGTTTATTATCAGACTGATTCTCTGCTCCTCCACTCGCAACGAGACTGA
Predicted protein sequences of Glyma.02g227200
>Glyma.02g227200.1.p sequence-type=predicted peptide transcript=Glyma.02g227200.1 locus=Glyma.02g227200 id=Glyma.02g227200.1.p.Wm82.a4.v1 annot-version=Wm82.a4.v1
MVKDTKPLAYAANNGYQQKGSSFDFDPSAPPPFKIAEIRASIPKHCWVKNPWRSLSYVLRDVLVIAALVAAAIHFDNWLLWLIYCPIQGTMFWALFVLGHDCGHGSFSDSPLLNSLVGHILHSSILVPYHGWRISHRTHHQNHGHIEKDESWVPLTEKIYKNLDSMTRLIRFTVPFPLFVYPIYLFSRSPGKEGSHFNPYSNLFPPSERKGIAISTLCWATMFSLLIYLSFITSPLLVLKLYGIPYWIFVMWLDFVTYLHHHGHHQKLPWYRGKEWSYLRGGLTTVDRDYGWINNIHHDIGTHVIHHLFPQIPHYHLVEATQAAKPVLGDYYREPERSAPLPFHLIKYLIQSMRQDHFVSDTGDVVYYQTDSLLLHSQRD*






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